| Literature DB >> 22848410 |
Phaedra Doukakis1, Ellen K Pikitch, Anna Rothschild, Rob DeSalle, George Amato, Sergios-Orestis Kolokotronis.
Abstract
BACKGROUND: The international wildlife trade is a key threat to biodiversity. Temporal genetic marketplace monitoring can determine if wildlife trade regulation efforts such as the Convention on International Trade in Endangered Species (CITES) are succeeding. Protected under CITES effective 1997, sturgeons and paddlefishes, the producers of black caviar, are flagship CITES species. METHODOLOGY/PRINCIPALEntities:
Mesh:
Year: 2012 PMID: 22848410 PMCID: PMC3405056 DOI: 10.1371/journal.pone.0040907
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Mislabeled samples as identified through cytb, D-loop and/or cox1 sequencing.
| Lot # | Labeled species |
|
| MtDNA identification |
| 30 | Beluga | 14 | 1 |
|
| 33 | Sevruga (Caspian/Black Sea) | 14 | 1 |
|
| 36 | Sevruga (Caspian Sea) | 10 | 2 |
|
| 38 | Beluga (Caspian Sea) | 10 | 1 |
|
| 64 | Sevruga (Kazakhstan) | 10 | 2 |
|
| 75 | Sevruga | 10 | 2 |
|
| 81 | Osetra ( | 10 | 1 |
|
| 93 | Osetra ( | 10 | 1 |
|
| 96 | Caspian Sea Black Caviar | 11 | 2 |
|
n: number of eggs sampled, n H: number of haplotypes detected.
Samples tested in the present caviar species identification survey.
| Labeled species | In-store | Internet | Price Range | GenBank accession nos. (sample number in parentheses) | |||
| 2006 | 2008 | 2006 | 2008 | (per oz US $) |
| D-loop | |
| Beluga( | 1, 13 | 23, 30 | 57 | 114.00–195.00 | JX238370(1), JX238369(13), JX238424(23),JX238402(30), JX238425(32), JX238387(38),JX238368(57), | JX213602(30), JX213607(38) | |
| Sevruga( | 3, 6, 9,12, 18 | 56, 58,71, 92 | 25, 28,31, 33 | 60, 64 | 60.00–161.00 | JX238379(3), JX238430(6) JX238380(9),JX238381(12), JX238426(18), JX238429(25),JX238427(28), JX238428(31), JX238350(33),JX238431(36a), JX238408(36b), JX238375(56),JX238373(58), JX238372(60),JX238383-4(64a–b), JX238376(69),JX238374(71), JX238349(75a), JX238352(75b),JX238377(76), JX238371(77), JX238382(84),JX238378(92) | JX213605-6(36a–b) |
| Ostera( | 2(F), 8(F) | 51(F),54(F),85(F) | 24(F) | 81 | 20.00–85.00 | JX238385(2), JX238386(8), JX238422(24),JX238389(51), JX238391(54), JX238398(81),JX238394(85) | JX213594(2), JX213595(8), JX213599(24), JX213609(51), JX213611(54), JX213620(81), JX213623(85) |
| Ostera( | 27 | 68, 82(F),83, 86(F),87, 93 | 45.00–175.00 | JX238432(27), JX238405(68), JX238399(82),JX238400(83), JX238406(86), JX238407(87),JX238395(93), | JX213600(27), JX213617(68), JX213621-22(82–83), JX213624-25(86–87), JX213626(93) | ||
| Osetra( | 14(F) | 85.00 | JX238409(14) | JX213597(14) | |||
| Osetra( | 55 | 29 | 63, 73 | 119.00–150.00 | JX238433(29), JX238403(55), JX238411(63),JX238397(73) | JX213601(29), JX213612(55), JX213614(63), JX213619(73) | |
| Osetra(unspecified) | 10, 20(F),21 | 44, 47(F),48(F),53(F),70 | 34, 35(F) | 62, 65(F),67 | 60.50–220.00 | JX238404(10), JX238413(20), JX238434(21),JX238435(34), JX238423(35), JX238410(44),JX238418(47), JX238388(48), JX238390(53),JX238392(62), JX238393(65), JX238401(67),JX238396(70) | JX213596(10), JX213598(21), JX213603-4(34–35), JX213608(48), JX213610(53), JX213613(62), JX213615(65), JX213616(67), JX213618(70) |
| White( | 11(F), 15 | 45(F),52(F, M),90 (F) | 40(F) | 32.50–75.00 | JX238412(11), JX238415(15), JX238416(40),JX238414(45), JX238418(52), JX238421(90) | ||
| Paddlefish( | 4, 16,19, 22 | 43, 50 | 26 | 61, 66,72, 80,89 | 16.50–57.00 | JX238437(4), JX238436(16), JX238346(19),JX238438(22), JX238358(26), JX238357(43),JX238356(50), JX238355(61), JX238354(66),JX238353(72), JX238347(80), JX238351(89) | |
| Hackleback( | 5, 7, 17 | 49 | 39 | 74, 79,91 | 15.00–28.00 | JX238359(5), JX238365(7), JX238360(17),JX238366(39), JX238367(49), JX238362(74),JX238363(79), JX238364(91) | |
| American-unspecified | 46 | 41(F) | 59, 88(F) | 48.00–75.00 | JX238417(41), JX238348(46), JX238361(59),JX238420(88) | ||
| CaviarSubstitute | 95 | 15.00 | N/A | N/A | |||
| Caspian SeaBlack Caviar | 96 | 7.00 | JX238439(96- | ||||
| Total | 23 | 19 | 18 | 33 | |||
mislabeled caviar lot (see Table 2 for identification), F: labeled as “farmed”, M: meat sample.
Figure 1Workflow for DNA-based method for caviar species identification.
Figure 2Best maximum likelihood phylogenetic tree of all cytb sequences.
Sequences from this study are coded by the year of sampling and the sample number. GenBank sequences are indicated by their corresponding accession numbers. Black circles denote well-supported nodes (>90%). LnLik = –4882.55. α = 0.223717.
Figure 3Best maximum likelihood phylogenetic tree of all D-loop sequences from this study.
Sequences from this study are coded by the year of sampling and the sample number. GenBank sequences are indicated by their corresponding accession numbers. LnLik = –3121.95. α = 0.345333.