Literature DB >> 22847105

Biomarkers in idiopathic pulmonary fibrosis.

Yingze Zhang1, Naftali Kaminski.   

Abstract

PURPOSE OF REVIEW: This review examines the recent literature on molecular biomarkers of idiopathic pulmonary fibrosis (IPF). Specific attention is dedicated to the recent studies that identified the genes associated with IPF and the peripheral blood biomarkers that predict outcome in IPF. RECENT
FINDINGS: Multiple studies attempted to identify diagnostic and predictive biomarkers in IPF. Until recently, these studies were limited in size and lacked replication, but still when taken together provided convincing evidence that changes in blood proteins (KL-6, SP-A, MMP-7, CCL-18, among others) or cells (fibrocytes and T-cell subpopulations) are indicative of the disease presence and outcome. More recently, larger studies have identified gene polymorphisms associated with IPF, as well as protein markers and integrated clinical and molecular prediction rules that accurately predict outcome in patients with IPF.
SUMMARY: The peripheral blood contains disease presence and outcome relevant information, and suggests distinct biologically defined outcome trajectories in patients with IPF. Although recently identified biomarkers should still be validated in multiple clinical contexts, there is sufficient evidence to suggest that collection of peripheral blood biomarkers needs to be incorporated in the design of drug studies and that some of these markers be clinically evaluated in lung transplant prioritization.

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Year:  2012        PMID: 22847105      PMCID: PMC4165635          DOI: 10.1097/MCP.0b013e328356d03c

Source DB:  PubMed          Journal:  Curr Opin Pulm Med        ISSN: 1070-5287            Impact factor:   3.155


  50 in total

1.  Antimicrobial peptides of multicellular organisms.

Authors:  Michael Zasloff
Journal:  Nature       Date:  2002-01-24       Impact factor: 49.962

2.  Gene expression analysis reveals matrilysin as a key regulator of pulmonary fibrosis in mice and humans.

Authors:  Fengrong Zuo; Naftali Kaminski; Elsie Eugui; John Allard; Zohar Yakhini; Amir Ben-Dor; Lance Lollini; David Morris; Yong Kim; Barbara DeLustro; Dean Sheppard; Annie Pardo; Moises Selman; Renu A Heller
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-30       Impact factor: 11.205

3.  Interleukin-1 gene cluster polymorphisms in sarcoidosis and idiopathic pulmonary fibrosis.

Authors:  Beata Hutyrová; Panagiotis Pantelidis; Jirí Drábek; Monika Zůrková; Vítezslav Kolek; Karel Lenhart; Kenneth I Welsh; Roland M Du Bois; Martin Petrek
Journal:  Am J Respir Crit Care Med       Date:  2002-01-15       Impact factor: 21.405

4.  Idiopathic pulmonary fibrosis: clinically meaningful primary endpoints in phase 3 clinical trials.

Authors:  Ganesh Raghu; Harold R Collard; Kevin J Anstrom; Kevin R Flaherty; Thomas R Fleming; Talmadge E King; Fernando J Martinez; Kevin K Brown
Journal:  Am J Respir Crit Care Med       Date:  2012-04-13       Impact factor: 21.405

5.  Aberrant Wnt/beta-catenin pathway activation in idiopathic pulmonary fibrosis.

Authors:  Marco Chilosi; Venerino Poletti; Alberto Zamò; Maurizio Lestani; Licia Montagna; Paola Piccoli; Serena Pedron; Manuela Bertaso; Aldo Scarpa; Bruno Murer; Alessandra Cancellieri; Roberta Maestro; Gianpietro Semenzato; Claudio Doglioni
Journal:  Am J Pathol       Date:  2003-05       Impact factor: 4.307

6.  Heterozygosity for a surfactant protein C gene mutation associated with usual interstitial pneumonitis and cellular nonspecific interstitial pneumonitis in one kindred.

Authors:  Alan Q Thomas; Kirk Lane; John Phillips; Melissa Prince; Cheryl Markin; Marcy Speer; David A Schwartz; Radhika Gaddipati; Annis Marney; Joyce Johnson; Richard Roberts; Jonathan Haines; Mildred Stahlman; James E Loyd
Journal:  Am J Respir Crit Care Med       Date:  2002-05-01       Impact factor: 21.405

7.  Genetic mutations in surfactant protein C are a rare cause of sporadic cases of IPF.

Authors:  W E Lawson; S W Grant; V Ambrosini; K E Womble; E P Dawson; K B Lane; C Markin; E Renzoni; P Lympany; A Q Thomas; J Roldan; T A Scott; T S Blackwell; J A Phillips; J E Loyd; R M du Bois
Journal:  Thorax       Date:  2004-11       Impact factor: 9.139

8.  Complement receptor 1 gene polymorphisms are associated with idiopathic pulmonary fibrosis.

Authors:  Michele Zorzetto; Ilaria Ferrarotti; Rocco Trisolini; Luigi Lazzari Agli; Roberta Scabini; Monique Novo; Annalisa De Silvestri; Marco Patelli; Miryam Martinetti; MariaClara Cuccia; Venerino Poletti; Ernesto Pozzi; Maurizio Luisetti
Journal:  Am J Respir Crit Care Med       Date:  2003-05-28       Impact factor: 21.405

9.  A multidimensional index and staging system for idiopathic pulmonary fibrosis.

Authors:  Brett Ley; Christopher J Ryerson; Eric Vittinghoff; Jay H Ryu; Sara Tomassetti; Joyce S Lee; Venerino Poletti; Matteo Buccioli; Brett M Elicker; Kirk D Jones; Talmadge E King; Harold R Collard
Journal:  Ann Intern Med       Date:  2012-05-15       Impact factor: 25.391

10.  Analysis of IL-12 p40 subunit gene and IFN-gamma G5644A polymorphisms in Idiopathic Pulmonary Fibrosis.

Authors:  Panagiota Latsi; Panagiotis Pantelidis; Dimitris Vassilakis; Hiroe Sato; Kenneth I Welsh; Roland M du Bois
Journal:  Respir Res       Date:  2003-06-27
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  35 in total

1.  A novel genomic signature with translational significance for human idiopathic pulmonary fibrosis.

Authors:  Yasmina Bauer; John Tedrow; Simon de Bernard; Magdalena Birker-Robaczewska; Kevin F Gibson; Brenda Juan Guardela; Patrick Hess; Axel Klenk; Kathleen O Lindell; Sylvie Poirey; Bérengère Renault; Markus Rey; Edgar Weber; Oliver Nayler; Naftali Kaminski
Journal:  Am J Respir Cell Mol Biol       Date:  2015-02       Impact factor: 6.914

Review 2.  Interstitial lung disease: NHLBI Workshop on the Primary Prevention of Chronic Lung Diseases.

Authors:  Ivan O Rosas; Paul F Dellaripa; David J Lederer; Dinesh Khanna; Lisa R Young; Fernando J Martinez
Journal:  Ann Am Thorac Soc       Date:  2014-04

3.  IL-17A deficiency mitigates bleomycin-induced complement activation during lung fibrosis.

Authors:  Ellyse Cipolla; Amanda J Fisher; Hongmei Gu; Elizabeth A Mickler; Manisha Agarwal; Carol A Wilke; Kevin K Kim; Bethany B Moore; Ragini Vittal
Journal:  FASEB J       Date:  2017-08-17       Impact factor: 5.191

4.  Pulmonary Aptamer Signatures in Children's Interstitial and Diffuse Lung Disease.

Authors:  Robin R Deterding; Brandie D Wagner; J Kirk Harris; Emily M DeBoer
Journal:  Am J Respir Crit Care Med       Date:  2019-12-15       Impact factor: 21.405

Review 5.  Approaching Clinical Trials in Childhood Interstitial Lung Disease and Pediatric Pulmonary Fibrosis.

Authors:  Robin R Deterding; Emily M DeBoer; Michal J Cidon; Terry E Robinson; David Warburton; Gail H Deutsch; Lisa R Young
Journal:  Am J Respir Crit Care Med       Date:  2019-11-15       Impact factor: 21.405

6.  Ancestry and genetic associations with bronchopulmonary dysplasia in preterm infants.

Authors:  Dara G Torgerson; Philip L Ballard; Roberta L Keller; Sam S Oh; Scott Huntsman; Donglei Hu; Celeste Eng; Esteban G Burchard; Roberta A Ballard
Journal:  Am J Physiol Lung Cell Mol Physiol       Date:  2018-08-16       Impact factor: 5.464

Review 7.  The molecular era of surfactant biology.

Authors:  Jeffrey A Whitsett
Journal:  Neonatology       Date:  2014-05-30       Impact factor: 4.035

8.  Single-cell RNA sequencing identifies diverse roles of epithelial cells in idiopathic pulmonary fibrosis.

Authors:  Yan Xu; Takako Mizuno; Anusha Sridharan; Yina Du; Minzhe Guo; Jie Tang; Kathryn A Wikenheiser-Brokamp; Anne-Karina T Perl; Vincent A Funari; Jason J Gokey; Barry R Stripp; Jeffrey A Whitsett
Journal:  JCI Insight       Date:  2016-12-08

9.  Reactive oxygen species-associated molecular signature predicts survival in patients with sepsis.

Authors:  Christian Bime; Tong Zhou; Ting Wang; Marvin J Slepian; Joe G N Garcia; Louise Hecker
Journal:  Pulm Circ       Date:  2016-06       Impact factor: 3.017

10.  Effect of telomere length on survival in patients with idiopathic pulmonary fibrosis: an observational cohort study with independent validation.

Authors:  Bridget D Stuart; Joyce S Lee; Julia Kozlitina; Imre Noth; Megan S Devine; Craig S Glazer; Fernando Torres; Vaidehi Kaza; Carlos E Girod; Kirk D Jones; Brett M Elicker; Shwu-Fan Ma; Rekha Vij; Harold R Collard; Paul J Wolters; Christine Kim Garcia
Journal:  Lancet Respir Med       Date:  2014-06-16       Impact factor: 30.700

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