Literature DB >> 22843604

Draft genome sequence of the soil bacterium Burkholderia terrae strain BS001, which interacts with fungal surface structures.

Rashid Nazir1, Martin A Hansen, Søren Sørensen, Jan Dirk van Elsas.   

Abstract

Burkholderia terrae BS001 is a soil bacterium which was originally isolated from the mycosphere of the ectomycorrhizal fungus Laccaria proxima. It exhibits a range of fungus-interacting traits which reveal its propensity to actively interact at fungal interfaces. Here, we present the approximately 11.5-Mb (G+C content, 61.52%) draft genome sequence of B. terrae BS001 with the aim of providing insight into the genomic basis of its ecological success in fungus-affected soil settings.

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Year:  2012        PMID: 22843604      PMCID: PMC3416221          DOI: 10.1128/JB.00725-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  7 in total

Review 1.  Mechanisms that promote bacterial fitness in fungal-affected soil microhabitats.

Authors:  Rashid Nazir; Jan A Warmink; Hidde Boersma; Jan Dirk van Elsas
Journal:  FEMS Microbiol Ecol       Date:  2009-11-27       Impact factor: 4.194

Review 2.  Common features of environmental and potentially beneficial plant-associated Burkholderia.

Authors:  Zulma Rocío Suárez-Moreno; Jesús Caballero-Mellado; Bruna G Coutinho; Lucia Mendonça-Previato; Euan K James; Vittorio Venturi
Journal:  Microb Ecol       Date:  2011-08-18       Impact factor: 4.552

3.  Migratory response of soil bacteria to Lyophyllum sp. strain Karsten in soil microcosms.

Authors:  J A Warmink; J D van Elsas
Journal:  Appl Environ Microbiol       Date:  2009-03-13       Impact factor: 4.792

4.  Fungal mycelia allow chemotactic dispersal of polycyclic aromatic hydrocarbon-degrading bacteria in water-unsaturated systems.

Authors:  Shoko Furuno; Katrin Päzolt; Cornelia Rabe; Thomas R Neu; Hauke Harms; Lukas Y Wick
Journal:  Environ Microbiol       Date:  2009-08-18       Impact factor: 5.491

5.  Burkholderia rhizoxinica sp. nov. and Burkholderia endofungorum sp. nov., bacterial endosymbionts of the plant-pathogenic fungus Rhizopus microsporus.

Authors:  Laila P Partida-Martinez; Ingrid Groth; Imke Schmitt; Walter Richter; Martin Roth; Christian Hertweck
Journal:  Int J Syst Evol Microbiol       Date:  2007-11       Impact factor: 2.747

6.  Selection of bacterial populations in the mycosphere of Laccaria proxima: is type III secretion involved?

Authors:  Jan Aaldrik Warmink; Jan Dirk van Elsas
Journal:  ISME J       Date:  2008-04-17       Impact factor: 10.302

7.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969

  7 in total
  9 in total

1.  The genome of the fungal-interactive soil bacterium Burkholderia terrae BS001-a plethora of outstanding interactive capabilities unveiled.

Authors:  Irshad Ul Haq; Katharina Graupner; Rashid Nazir; Jan Dirk van Elsas
Journal:  Genome Biol Evol       Date:  2014-06-12       Impact factor: 3.416

2.  Molecular signatures and phylogenomic analysis of the genus Burkholderia: proposal for division of this genus into the emended genus Burkholderia containing pathogenic organisms and a new genus Paraburkholderia gen. nov. harboring environmental species.

Authors:  Amandeep Sawana; Mobolaji Adeolu; Radhey S Gupta
Journal:  Front Genet       Date:  2014-12-19       Impact factor: 4.599

3.  Draft genome sequences of three fungal-interactive Paraburkholderia terrae strains, BS007, BS110 and BS437.

Authors:  Akbar Adjie Pratama; Irshad Ul Haq; Rashid Nazir; Maryam Chaib De Mares; Jan Dirk van Elsas
Journal:  Stand Genomic Sci       Date:  2017-12-18

4.  A novel inducible prophage from the mycosphere inhabitant Paraburkholderia terrae BS437.

Authors:  Akbar Adjie Pratama; Jan Dirk van Elsas
Journal:  Sci Rep       Date:  2017-08-22       Impact factor: 4.379

5.  Role of flagella and type four pili in the co-migration of Burkholderia terrae BS001 with fungal hyphae through soil.

Authors:  Pu Yang; Miaozhi Zhang; Jan Dirk van Elsas
Journal:  Sci Rep       Date:  2017-06-07       Impact factor: 4.379

6.  Absence of genome reduction in diverse, facultative endohyphal bacteria.

Authors:  David A Baltrus; Kevin Dougherty; Kayla R Arendt; Marcel Huntemann; Alicia Clum; Manoj Pillay; Krishnaveni Palaniappan; Neha Varghese; Natalia Mikhailova; Dimitrios Stamatis; T B K Reddy; Chew Yee Ngan; Chris Daum; Nicole Shapiro; Victor Markowitz; Natalia Ivanova; Nikos Kyrpides; Tanja Woyke; A Elizabeth Arnold
Journal:  Microb Genom       Date:  2017-02-28

7.  Draft Genome Sequence of Burkholderia contaminans 293K04B, an Endosymbiont of the Sponge-Derived Fungus Stachylidium bicolor.

Authors:  Katja M Fisch; Cristina Silva Pereira; Olga Genilloud; Celso Almeida; Till F Schäberle
Journal:  Genome Announc       Date:  2017-11-09

8.  Bacterial Community Selection of Russula griseocarnosa Mycosphere Soil.

Authors:  Fei Yu; Jun-Feng Liang; Jie Song; Sheng-Kun Wang; Jun-Kun Lu
Journal:  Front Microbiol       Date:  2020-03-25       Impact factor: 5.640

9.  Comparative genomics of Burkholderia multivorans, a ubiquitous pathogen with a highly conserved genomic structure.

Authors:  Charlotte Peeters; Vaughn S Cooper; Philip J Hatcher; Bart Verheyde; Aurélien Carlier; Peter Vandamme
Journal:  PLoS One       Date:  2017-04-21       Impact factor: 3.240

  9 in total

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