Literature DB >> 22843590

Genome sequence of Klebsiella pneumoniae LZ, a potential platform strain for 1,3-propanediol production.

Fei Tao1, Cui Tai, Zhen Liu, Ailong Wang, Yu Wang, Lixiang Li, Chao Gao, Cuiqing Ma, Ping Xu.   

Abstract

Klebsiella pneumoniae LZ is a bacterium isolated from soil which can produce 1,3-propanediol from glycerol. Here we present a 5,431,750-bp assembly of its genome sequence. We annotated 9 coding sequences (CDSs) responsible for glycerol fermentation to 1,3-propanediol, 19 CDSs encoding glycerol utilization, and 134 CDSs related to its virulence and defense.

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Year:  2012        PMID： 22843590      PMCID： PMC3416217          DOI： 10.1128/JB.00864-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  7 in total

1.  Fermentation strategies for 1,3-propanediol production from glycerol using a genetically engineered Klebsiella pneumoniae strain to eliminate by-product formation.

Authors:  Baek-Rock Oh; Jeong-Woo Seo; Sun-Yeon Heo; Won-Kyung Hong; Lian Hua Luo; Jun Ho Son; Don-Hee Park; Chul-Ho Kim
Journal:  Bioprocess Biosyst Eng       Date:  2011-09-30       Impact factor: 3.210

2.  Clinical and microbiological characteristics of community-acquired thoracic empyema or complicated parapneumonic effusion caused by Klebsiella pneumoniae in Taiwan.

Authors:  Y-T Lin; T-L Chen; L K Siu; S-F Hsu; C-P Fung
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2010-05-27       Impact factor: 3.267

3.  Velvet: algorithms for de novo short read assembly using de Bruijn graphs.

Authors:  Daniel R Zerbino; Ewan Birney
Journal:  Genome Res       Date:  2008-03-18       Impact factor: 9.043

4.  Simultaneous production of 3-hydroxypropionic acid and 1,3-propanediol from glycerol by a recombinant strain of Klebsiella pneumoniae.

Authors:  Yanna Huang; Zhimin Li; Kazuyuki Shimizu; Qin Ye
Journal:  Bioresour Technol       Date:  2011-10-14       Impact factor: 9.642

5.  An experimentally validated genome-scale metabolic reconstruction of Klebsiella pneumoniae MGH 78578, iYL1228.

Authors:  Yu-Chieh Liao; Tzu-Wen Huang; Feng-Chi Chen; Pep Charusanti; Jay S J Hong; Hwan-You Chang; Shih-Feng Tsai; Bernhard O Palsson; Chao A Hsiung
Journal:  J Bacteriol       Date:  2011-02-04       Impact factor: 3.490

6.  1,3-Propanediol dehydrogenase from Klebsiella pneumoniae: decameric quaternary structure and possible subunit cooperativity.

Authors:  David Marçal; Ana Toste Rêgo; Maria Arménia Carrondo; Francisco J Enguita
Journal:  J Bacteriol       Date:  2008-11-14       Impact factor: 3.490

7.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969
  7 in total
  3 in total

1.  Glycerol dehydrogenase plays a dual role in glycerol metabolism and 2,3-butanediol formation in Klebsiella pneumoniae.

Authors:  Yu Wang; Fei Tao; Ping Xu
Journal:  J Biol Chem       Date:  2014-01-15       Impact factor: 5.157

2.  Genome Sequence of Clostridium diolis Strain DSM 15410, a Promising Natural Producer of 1,3-Propanediol.

Authors:  Yu Wang; Fei Tao; Hongzhi Tang; Ping Xu
Journal:  Genome Announc       Date:  2013-08-01

3.  Genome Sequence of Klebsiella pneumoniae Strain ATCC 25955, an Oxygen-Insensitive Producer of 1,3-Propanediol.

Authors:  Yu Wang; Fei Tao; Chao Li; Lixiang Li; Ping Xu
Journal:  Genome Announc       Date:  2013-08-08
  3 in total

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