Literature DB >> 22843583

Genome sequence of the filamentous bacterium Fibrisoma limi BUZ 3T.

Manuela Filippini1, Weihong Qi, Sebastian Jaenicke, Alexander Goesmann, Theo H M Smits, Homayoun C Bagheri.   

Abstract

Fibrisoma limi strain BUZ 3(T), a Gram-negative bacterium, was isolated from coastal mud from the North Sea (Fedderwardersiel, Germany) and characterized using a polyphasic approach in 2011. The genome consists of a chromosome of about 7.5 Mb and three plasmids.

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Year:  2012        PMID： 22843583      PMCID： PMC3416256          DOI： 10.1128/JB.00869-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  5 in total

1.  GenDB--an open source genome annotation system for prokaryote genomes.

Authors:  Folker Meyer; Alexander Goesmann; Alice C McHardy; Daniela Bartels; Thomas Bekel; Jörn Clausen; Jörn Kalinowski; Burkhard Linke; Oliver Rupp; Robert Giegerich; Alfred Pühler
Journal:  Nucleic Acids Res       Date:  2003-04-15       Impact factor: 16.971

2.  Hawkeye and AMOS: visualizing and assessing the quality of genome assemblies.

Authors:  Michael C Schatz; Adam M Phillippy; Daniel D Sommer; Arthur L Delcher; Daniela Puiu; Giuseppe Narzisi; Steven L Salzberg; Mihai Pop
Journal:  Brief Bioinform       Date:  2011-12-23       Impact factor: 11.622

3.  OSLay: optimal syntenic layout of unfinished assemblies.

Authors:  Daniel C Richter; Stephan C Schuster; Daniel H Huson
Journal:  Bioinformatics       Date:  2007-04-26       Impact factor: 6.937

4.  Fibrisoma limi gen. nov., sp. nov., a filamentous bacterium isolated from tidal flats.

Authors:  Manuela Filippini; Andres Kaech; Urs Ziegler; Homayoun C Bagheri
Journal:  Int J Syst Evol Microbiol       Date:  2010-07-02       Impact factor: 2.747

5.  Complete genome sequence of Spirosoma linguale type strain (1).

Authors:  Kathleen Lail; Johannes Sikorski; Elizabeth Saunders; Alla Lapidus; Tijana Glavina Del Rio; Alex Copeland; Hope Tice; Jan-Fang Cheng; Susan Lucas; Matt Nolan; David Bruce; Lynne Goodwin; Sam Pitluck; Natalia Ivanova; Konstantinos Mavromatis; Galina Ovchinnikova; Amrita Pati; Amy Chen; Krishna Palaniappan; Miriam Land; Loren Hauser; Yun-Juan Chang; Cynthia D Jeffries; Patrick Chain; Thomas Brettin; John C Detter; Andrea Schütze; Manfred Rohde; Brian J Tindall; Markus Göker; Jim Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Nikos C Kyrpides; Hans-Peter Klenk; Feng Chen
Journal:  Stand Genomic Sci       Date:  2010-03-30
  5 in total
  2 in total

1.  Bioinformatics analysis of bacterial annexins--putative ancestral relatives of eukaryotic annexins.

Authors:  Praveen Kumar Kodavali; Małgorzata Dudkiewicz; Sławomir Pikuła; Krzysztof Pawłowski
Journal:  PLoS One       Date:  2014-01-16       Impact factor: 3.240

2.  Draft Genome Sequence of Cellulose-Digesting Bacterium Sporocytophaga myxococcoides PG-01.

Authors:  Lin Liu; Peiji Gao; Guanjun Chen; Lushan Wang
Journal:  Genome Announc       Date:  2014-11-20
  2 in total

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