Literature DB >> 22841001

Clocks, metabolism, and the epigenome.

Dan Feng1, Mitchell A Lazar.   

Abstract

Many behaviors and physiological activities in living organisms display circadian rhythms, allowing the organisms to anticipate and prepare for the diurnal changes in the living environment. In this way, metabolic processes are aligned with the periodic environmental changes and behavioral cycles, such as the sleep/wake and fasting/feeding cycles. Disturbances of this alignment significantly increase the risk of metabolic diseases. Meanwhile, the circadian clock receives signals from the environment and feedback from metabolic pathways, and adjusts its activity and function. Growing evidence connects the circadian clock with epigenomic regulators. Here we review the recent advances in understanding the crosstalk between the circadian clock and energy metabolism through epigenomic programming and transcriptional regulation.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22841001      PMCID: PMC3408602          DOI: 10.1016/j.molcel.2012.06.026

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  103 in total

1.  Effects of fasting and re-feeding on the expression of Dec1, Per1, and other clock-related genes.

Authors:  Takeshi Kawamoto; Mitsuhide Noshiro; Masae Furukawa; Kiyomasa K Honda; Ayumu Nakashima; Taichi Ueshima; Emiko Usui; Yuki Katsura; Katsumi Fujimoto; Sato Honma; Ken-ichi Honma; Taizo Hamada; Yukio Kato
Journal:  J Biochem       Date:  2006-07-27       Impact factor: 3.387

Review 2.  Genetic and molecular analysis of the central and peripheral circadian clockwork of mice.

Authors:  E S Maywood; J S O'Neill; A B Reddy; J E Chesham; H M Prosser; C P Kyriacou; S I H Godinho; P M Nolan; M H Hastings
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2007

3.  Fatty acid synthesis in liver and adipose tissue of normal and genetically obese (ob/ob) mice during the 24-hour cycle.

Authors:  D A Hems; E A Rath; T R Verrinder
Journal:  Biochem J       Date:  1975-08       Impact factor: 3.857

4.  Structure of Rev-erbalpha bound to N-CoR reveals a unique mechanism of nuclear receptor-co-repressor interaction.

Authors:  Caroline A Phelan; Robert T Gampe; Millard H Lambert; Derek J Parks; Valerie Montana; Jane Bynum; Timothy M Broderick; Xiao Hu; Shawn P Williams; Robert T Nolte; Mitchell A Lazar
Journal:  Nat Struct Mol Biol       Date:  2010-06-27       Impact factor: 15.369

5.  Nutrient control of glucose homeostasis through a complex of PGC-1alpha and SIRT1.

Authors:  Joseph T Rodgers; Carlos Lerin; Wilhelm Haas; Steven P Gygi; Bruce M Spiegelman; Pere Puigserver
Journal:  Nature       Date:  2005-03-03       Impact factor: 49.962

6.  Absence of the SRC-2 coactivator results in a glycogenopathy resembling Von Gierke's disease.

Authors:  Atul R Chopra; Jean-Francois Louet; Pradip Saha; Jie An; Franco Demayo; Jianming Xu; Brian York; Saul Karpen; Milton Finegold; David Moore; Lawrence Chan; Christopher B Newgard; Bert W O'Malley
Journal:  Science       Date:  2008-11-28       Impact factor: 47.728

Review 7.  Circadian integration of metabolism and energetics.

Authors:  Joseph Bass; Joseph S Takahashi
Journal:  Science       Date:  2010-12-03       Impact factor: 47.728

8.  Regulation of circadian behaviour and metabolism by REV-ERB-α and REV-ERB-β.

Authors:  Han Cho; Xuan Zhao; Megumi Hatori; Ruth T Yu; Grant D Barish; Michael T Lam; Ling-Wa Chong; Luciano DiTacchio; Annette R Atkins; Christopher K Glass; Christopher Liddle; Johan Auwerx; Michael Downes; Satchidananda Panda; Ronald M Evans
Journal:  Nature       Date:  2012-03-29       Impact factor: 49.962

9.  Circadian clock feedback cycle through NAMPT-mediated NAD+ biosynthesis.

Authors:  Kathryn Moynihan Ramsey; Jun Yoshino; Cynthia S Brace; Dana Abrassart; Yumiko Kobayashi; Biliana Marcheva; Hee-Kyung Hong; Jason L Chong; Ethan D Buhr; Choogon Lee; Joseph S Takahashi; Shin-Ichiro Imai; Joseph Bass
Journal:  Science       Date:  2009-03-19       Impact factor: 47.728

10.  Hepatic Hdac3 promotes gluconeogenesis by repressing lipid synthesis and sequestration.

Authors:  Zheng Sun; Russell A Miller; Rajesh T Patel; Jie Chen; Ravindra Dhir; Hong Wang; Dongyan Zhang; Mark J Graham; Terry G Unterman; Gerald I Shulman; Carole Sztalryd; Michael J Bennett; Rexford S Ahima; Morris J Birnbaum; Mitchell A Lazar
Journal:  Nat Med       Date:  2012-06       Impact factor: 53.440

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  112 in total

1.  TMEM14C is required for erythroid mitochondrial heme metabolism.

Authors:  Yvette Y Yien; Raymond F Robledo; Iman J Schultz; Naoko Takahashi-Makise; Babette Gwynn; Daniel E Bauer; Abhishek Dass; Gloria Yi; Liangtao Li; Gordon J Hildick-Smith; Jeffrey D Cooney; Eric L Pierce; Kyla Mohler; Tamara A Dailey; Non Miyata; Paul D Kingsley; Caterina Garone; Shilpa M Hattangadi; Hui Huang; Wen Chen; Ellen M Keenan; Dhvanit I Shah; Thorsten M Schlaeger; Salvatore DiMauro; Stuart H Orkin; Alan B Cantor; James Palis; Carla M Koehler; Harvey F Lodish; Jerry Kaplan; Diane M Ward; Harry A Dailey; John D Phillips; Luanne L Peters; Barry H Paw
Journal:  J Clin Invest       Date:  2014-08-26       Impact factor: 14.808

2.  Photoreceptor phagocytosis is mediated by phosphoinositide signaling.

Authors:  Debarshi Mustafi; Brian M Kevany; Christel Genoud; Xiaodong Bai; Krzysztof Palczewski
Journal:  FASEB J       Date:  2013-08-02       Impact factor: 5.191

Review 3.  The orphan nuclear receptors at their 25-year reunion.

Authors:  Shannon E Mullican; Joanna R Dispirito; Mitchell A Lazar
Journal:  J Mol Endocrinol       Date:  2013-11-26       Impact factor: 5.098

Review 4.  Dad's Snoring May Have Left Molecular Scars in Your DNA: the Emerging Role of Epigenetics in Sleep Disorders.

Authors:  Daniela Morales-Lara; Clelia De-la-Peña; Eric Murillo-Rodríguez
Journal:  Mol Neurobiol       Date:  2017-02-02       Impact factor: 5.590

Review 5.  Sleep, Health, and Society.

Authors:  Michael A Grandner
Journal:  Sleep Med Clin       Date:  2016-12-20

6.  GENE REGULATION. Discrete functions of nuclear receptor Rev-erbα couple metabolism to the clock.

Authors:  Yuxiang Zhang; Bin Fang; Matthew J Emmett; Manashree Damle; Zheng Sun; Dan Feng; Sean M Armour; Jarrett R Remsberg; Jennifer Jager; Raymond E Soccio; David J Steger; Mitchell A Lazar
Journal:  Science       Date:  2015-06-04       Impact factor: 47.728

7.  JARID1a Ablation in the Liver Alters Systemic Metabolism and Adaptation to Feeding.

Authors:  Kacee Ann DiTacchio; Diana Kalinowska; Anand Rajamani Saran; Ashley Byrne; Christopher Vollmers; Luciano DiTacchio
Journal:  Cell Rep       Date:  2020-05-26       Impact factor: 9.423

Review 8.  Circadian Rhythms in the Pathogenesis and Treatment of Fatty Liver Disease.

Authors:  Anand R Saran; Shravan Dave; Amir Zarrinpar
Journal:  Gastroenterology       Date:  2020-02-13       Impact factor: 22.682

9.  Systems biology and innate immunity.

Authors:  Scott D Kobayashi; Frank R Deleo
Journal:  J Innate Immun       Date:  2013-02-21       Impact factor: 7.349

10.  Coactivator-Dependent Oscillation of Chromatin Accessibility Dictates Circadian Gene Amplitude via REV-ERB Loading.

Authors:  Brian York; Bert W O'Malley; Bokai Zhu; Leah A Gates; Erin Stashi; Subhamoy Dasgupta; Naomi Gonzales; Adam Dean; Clifford C Dacso
Journal:  Mol Cell       Date:  2015-11-21       Impact factor: 17.970

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