Literature DB >> 22837423

Multilevel computational modeling and quantitative analysis of bone remodeling.

Nicola Paoletti1, Pietro Liò, Emanuela Merelli, Marco Viceconti.   

Abstract

Our work focuses on bone remodeling with a multiscale breadth that ranges from modeling intracellular and intercellular RANK/RANKL signaling to tissue dynamics, by developing a multilevel modeling framework. Several important findings provide clear evidences of the multiscale properties of bone formation and of the links between RANK/RANKL and bone density in healthy and disease conditions. Recent studies indicate that the circulating levels of OPG and RANKL are inversely related to bone turnover and Bone Mineral Density (BMD) and contribute to the development of osteoporosis in postmenopausal women, and thalassemic patients. We make use of a spatial process algebra, the Shape Calculus, to control stochastic cell agents that are continuously remodeling the bone. We found that our description is effective for such a multiscale, multilevel process and that RANKL signaling small dynamic concentration defects are greatly amplified by the continuous alternation of absorption and formation resulting in large structural bone defects. This work contributes to the computational modeling of complex systems with a multilevel approach connecting formal languages and agent-based simulation tools.

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Year:  2012        PMID: 22837423     DOI: 10.1109/TCBB.2012.51

Source DB:  PubMed          Journal:  IEEE/ACM Trans Comput Biol Bioinform        ISSN: 1545-5963            Impact factor:   3.710


  5 in total

1.  Teff Grain-Based Functional Food for Prevention of Osteoporosis: Sensory Evaluation and Molecular Docking Approach.

Authors:  Diana Asfha; Toshika Mishra; Suneetha Vuppu
Journal:  Plant Foods Hum Nutr       Date:  2022-09-12       Impact factor: 4.124

2.  Modelling osteomyelitis.

Authors:  Pietro Liò; Nicola Paoletti; Mohammad Ali Moni; Kathryn Atwell; Emanuela Merelli; Marco Viceconti
Journal:  BMC Bioinformatics       Date:  2012-09-07       Impact factor: 3.169

Review 3.  Computational Modeling, Formal Analysis, and Tools for Systems Biology.

Authors:  Ezio Bartocci; Pietro Lió
Journal:  PLoS Comput Biol       Date:  2016-01-21       Impact factor: 4.475

4.  Modeling Early Stages of Bone and Joint Infections Dynamics in Humans: A Multi-Agent, Multi-System Based Model.

Authors:  Salma Alsassa; Thomas Lefèvre; Vincent Laugier; Eric Stindel; Séverine Ansart
Journal:  Front Mol Biosci       Date:  2020-03-12

5.  F2r negatively regulates osteoclastogenesis through inhibiting the Akt and NFκB signaling pathways.

Authors:  Yan Zhang; He Wang; Guochun Zhu; Airong Qian; Wei Chen
Journal:  Int J Biol Sci       Date:  2020-03-12       Impact factor: 6.580

  5 in total

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