Literature DB >> 22835933

The N-terminus of TDP-43 promotes its oligomerization and enhances DNA binding affinity.

Chung-ke Chang1, Tzong-Huah Wu, Chu-Ya Wu, Ming-hui Chiang, Elsie Khai-Woon Toh, Yin-Chih Hsu, Ku-Feng Lin, Yu-heng Liao, Tai-huang Huang, Joseph Jen-Tse Huang.   

Abstract

TDP-43 is a DNA/RNA-binding protein associated with different neurodegenerative diseases such as amyotrophic lateral sclerosis (ALS) and frontotemporal lobar degeneration (FTLD-U). Here, the structural and physical properties of the N-terminus on TDP-43 have been carefully characterized through a combination of nuclear magnetic resonance (NMR), circular dichroism (CD) and fluorescence anisotropy studies. We demonstrate for the first time the importance of the N-terminus in promoting TDP-43 oligomerization and enhancing its DNA-binding affinity. An unidentified structural domain in the N-terminus is also disclosed. Our findings provide insights into the N-terminal domain function of TDP-43.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22835933     DOI: 10.1016/j.bbrc.2012.07.071

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  45 in total

Review 1.  The molecular language of membraneless organelles.

Authors:  Edward Gomes; James Shorter
Journal:  J Biol Chem       Date:  2018-07-25       Impact factor: 5.157

Review 2.  The extreme N-terminus of TDP-43 mediates the cytoplasmic aggregation of TDP-43 and associated toxicity in vivo.

Authors:  Hiroki Sasaguri; Jeannie Chew; Ya-Fei Xu; Tania F Gendron; Aliesha Garrett; Chris W Lee; Karen Jansen-West; Peter O Bauer; Emilie A Perkerson; Jimei Tong; Caroline Stetler; Yong-Jie Zhang
Journal:  Brain Res       Date:  2016-05-04       Impact factor: 3.252

3.  RNA Binding Antagonizes Neurotoxic Phase Transitions of TDP-43.

Authors:  Jacob R Mann; Amanda M Gleixner; Jocelyn C Mauna; Edward Gomes; Michael R DeChellis-Marks; Patrick G Needham; Katie E Copley; Bryan Hurtle; Bede Portz; Noah J Pyles; Lin Guo; Christopher B Calder; Zachary P Wills; Udai B Pandey; Julia K Kofler; Jeffrey L Brodsky; Amantha Thathiah; James Shorter; Christopher J Donnelly
Journal:  Neuron       Date:  2019-02-27       Impact factor: 17.173

4.  TDP-43 N terminus encodes a novel ubiquitin-like fold and its unfolded form in equilibrium that can be shifted by binding to ssDNA.

Authors:  Haina Qin; Liang-Zhong Lim; Yuanyuan Wei; Jianxing Song
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-12       Impact factor: 11.205

5.  Point mutations in the N-terminal domain of transactive response DNA-binding protein 43 kDa (TDP-43) compromise its stability, dimerization, and functions.

Authors:  Miguel Mompeán; Valentina Romano; David Pantoja-Uceda; Cristiana Stuani; Francisco E Baralle; Emanuele Buratti; Douglas V Laurents
Journal:  J Biol Chem       Date:  2017-05-31       Impact factor: 5.157

6.  ALS Mutations Disrupt Phase Separation Mediated by α-Helical Structure in the TDP-43 Low-Complexity C-Terminal Domain.

Authors:  Alexander E Conicella; Gül H Zerze; Jeetain Mittal; Nicolas L Fawzi
Journal:  Structure       Date:  2016-08-18       Impact factor: 5.006

7.  Aberrant assembly of RNA recognition motif 1 links to pathogenic conversion of TAR DNA-binding protein of 43 kDa (TDP-43).

Authors:  Akemi Shodai; Toshifumi Morimura; Akemi Ido; Tsukasa Uchida; Takashi Ayaki; Rina Takahashi; Soichiro Kitazawa; Sakura Suzuki; Mikako Shirouzu; Takanori Kigawa; Yutaka Muto; Shigeyuki Yokoyama; Ryosuke Takahashi; Ryo Kitahara; Hidefumi Ito; Noriko Fujiwara; Makoto Urushitani
Journal:  J Biol Chem       Date:  2013-04-04       Impact factor: 5.157

8.  Shortened TDP43 isoforms upregulated by neuronal hyperactivity drive TDP43 pathology in ALS.

Authors:  Kaitlin Weskamp; Elizabeth M Tank; Roberto Miguez; Jonathon P McBride; Nicolás B Gómez; Matthew White; Ziqiang Lin; Carmen Moreno Gonzalez; Andrea Serio; Jemeen Sreedharan; Sami J Barmada
Journal:  J Clin Invest       Date:  2020-03-02       Impact factor: 14.808

9.  Poly(ADP-Ribose) Prevents Pathological Phase Separation of TDP-43 by Promoting Liquid Demixing and Stress Granule Localization.

Authors:  Leeanne McGurk; Edward Gomes; Lin Guo; Jelena Mojsilovic-Petrovic; Van Tran; Robert G Kalb; James Shorter; Nancy M Bonini
Journal:  Mol Cell       Date:  2018-08-09       Impact factor: 17.970

10.  Disease causing mutants of TDP-43 nucleic acid binding domains are resistant to aggregation and have increased stability and half-life.

Authors:  James A Austin; Gareth S A Wright; Seiji Watanabe; J Günter Grossmann; Svetlana V Antonyuk; Koji Yamanaka; S Samar Hasnain
Journal:  Proc Natl Acad Sci U S A       Date:  2014-03-03       Impact factor: 11.205

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