Literature DB >> 2282356

CRYStallize: a crystallographic symmetry display and handling subpackage in TOM/FRODO.

A Roussel1, J C Fontecilla-Camps, C Cambillau.   

Abstract

We have implemented in TOM/FRODO a protein crystallographic symmetry display and handling package, called CRYStallize. This package is designed as an aid in solving protein structures by molecular replacement methods. It allows the rotation/translation solutions provided by molecular replacement programs to be checked in a fast and easy way. Using CRYStallize, approximate solutions can also be improved by manual modifications. Symmetry-related objects, represented as surfaces, can be generated and handled in the same way as the reference molecules, thus permitting an efficient analysis of crystal packing and site accessibility. This program is available in the TOM/FRODO software release, which runs on the Silicon-Graphics workstations.

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Year:  1990        PMID: 2282356     DOI: 10.1016/0263-7855(90)80087-v

Source DB:  PubMed          Journal:  J Mol Graph        ISSN: 0263-7855


  7 in total

1.  Insights into the mechanism of microtubule stabilization by Taxol.

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Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-26       Impact factor: 11.205

2.  Molecular distinctions between Aurora A and B: a single residue change transforms Aurora A into correctly localized and functional Aurora B.

Authors:  Fabienne Hans; Dimitrios A Skoufias; Stefan Dimitrov; Robert L Margolis
Journal:  Mol Biol Cell       Date:  2009-06-03       Impact factor: 4.138

3.  Identification of a unique ganglioside binding loop within botulinum neurotoxins C and D-SA .

Authors:  Andrew P-A Karalewitz; Abby R Kroken; Zhuji Fu; Michael R Baldwin; Jung-Ja P Kim; Joseph T Barbieri
Journal:  Biochemistry       Date:  2010-09-21       Impact factor: 3.162

4.  Structures of wild-type and mutant human spermidine/spermine N1-acetyltransferase, a potential therapeutic drug target.

Authors:  Maria C Bewley; Vito Graziano; Jiangsheng Jiang; Eileen Matz; F William Studier; Anthony E Pegg; Catherine S Coleman; John M Flanagan
Journal:  Proc Natl Acad Sci U S A       Date:  2006-02-02       Impact factor: 11.205

5.  Intrasteric control of AMPK via the gamma1 subunit AMP allosteric regulatory site.

Authors:  Julian Adams; Zhi-Ping Chen; Bryce J W Van Denderen; Craig J Morton; Michael W Parker; Lee A Witters; David Stapleton; Bruce E Kemp
Journal:  Protein Sci       Date:  2004-01       Impact factor: 6.725

6.  Modeling the helicase domain of Brome mosaic virus 1a replicase.

Authors:  Damià Garriga; Juana Dìez; Baldomero Oliva
Journal:  J Mol Model       Date:  2004-10-20       Impact factor: 1.810

7.  Mapping of immunogenic and protein-interacting regions at the surface of the seven-bladed beta-propeller domain of the HIV-1 cellular interactor EED.

Authors:  Dina Rakotobe; Sébastien Violot; Saw See Hong; Patrice Gouet; Pierre Boulanger
Journal:  Virol J       Date:  2008-02-27       Impact factor: 4.099

  7 in total

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