Literature DB >> 22823140

Intrinsic dynamics of DNA-polymer complexes: a mechanism for DNA release.

Lisa E Prevette1, Evgenia N Nikolova, Hashim M Al-Hashimi, Mark M Banaszak Holl.   

Abstract

The transfer of genetic material into cells using nonviral vectors offers unique potential for therapeutics; however, the efficacy of delivery depends upon a poorly understood, multistep pathway, limiting the prospects for successful gene delivery. Mechanistic insight into DNA association and release has been hampered by a lack of atomic resolution structural and dynamic information for DNA-polymer complexes (polyplexes). Here, we report a dendrimer-based polyplex system containing poly(ethyleneglycol) (PEG) arms that is suitable for atomic-level characterization by solution NMR spectroscopy. NMR chemical shift, line width, and proton transverse relaxation rate measurements reveal that free and dendrimer-bound polyplex DNA exchange rapidly relative to the NMR time scale (<millisecond). The dendrimers retain a high degree of mobility in the polyplex, whereas the DNA shows restrained mobility, suggesting that the polyplex is a highly dynamic complex with a rapidly exchanging dendrimer atmosphere around a more rigid DNA framework.

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Year:  2012        PMID: 22823140      PMCID: PMC3436429          DOI: 10.1021/mp3002864

Source DB:  PubMed          Journal:  Mol Pharm        ISSN: 1543-8384            Impact factor:   4.939


  33 in total

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Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

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Authors:  T A Early; D R Kearns; W Hillen; R D Wells
Journal:  Biochemistry       Date:  1981-06-23       Impact factor: 3.162

6.  Ionic conductivity in crystalline polymer electrolytes.

Authors:  Z Gadjourova; Y G Andreev; D P Tunstall; P G Bruce
Journal:  Nature       Date:  2001-08-02       Impact factor: 49.962

7.  Stealth dendrimers for drug delivery: correlation between PEGylation, cytocompatibility, and drug payload.

Authors:  Hu Yang; Stephanie T Lopina; Linda P DiPersio; Steven P Schmidt
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8.  Proton nuclear magnetic resonance investigation of the conformation and dynamics in the synthetic deoxyribonucleic acid decamers d(ATATCGATAT) and d(ATATGCATAT).

Authors:  J Feigon; W A Denny; W Leupin; D R Kearns
Journal:  Biochemistry       Date:  1983-12-06       Impact factor: 3.162

9.  Missing pieces in understanding the intracellular trafficking of polycation/DNA complexes.

Authors:  You-Yeon Won; Rahul Sharma; Stephen F Konieczny
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10.  The decrease of PAMAM dendrimer-induced cytotoxicity by PEGylation via attenuation of oxidative stress.

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Journal:  Nanotechnology       Date:  2009-02-16       Impact factor: 3.874

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  4 in total

1.  Polyplex-induced cytosolic nuclease activation leads to differential transgene expression.

Authors:  Rahul Rattan; Sriram Vaidyanathan; Gordon S-H Wu; Anisha Shakya; Bradford G Orr; Mark M Banaszak Holl
Journal:  Mol Pharm       Date:  2013-07-24       Impact factor: 4.939

2.  Quantitative Measurement of Cationic Polymer Vector and Polymer-pDNA Polyplex Intercalation into the Cell Plasma Membrane.

Authors:  Sriram Vaidyanathan; Kevin B Anderson; Rachel L Merzel; Binyamin Jacobovitz; Milan P Kaushik; Christina N Kelly; Mallory A van Dongen; Casey A Dougherty; Bradford G Orr; Mark M Banaszak Holl
Journal:  ACS Nano       Date:  2015-05-14       Impact factor: 15.881

3.  Rapid Exchange Between Free and Bound States in RNA-Dendrimer Polyplexes: Implications on the Mechanism of Delivery and Release.

Authors:  Anisha Shakya; Casey A Dougherty; Yi Xue; Hashim M Al-Hashimi; Mark M Banaszak Holl
Journal:  Biomacromolecules       Date:  2015-12-11       Impact factor: 6.988

4.  Unveiling an NMR-Invisible Fraction of Polymers in Solution by Saturation Transfer Difference.

Authors:  Ramon Novoa-Carballal; Manuel Martin-Pastor; Eduardo Fernandez-Megia
Journal:  ACS Macro Lett       Date:  2021-11-10       Impact factor: 6.903

  4 in total

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