| Literature DB >> 22822376 |
Haiyan Shi1, Shanjiang Yu2, Dong Liu1, Leen Van Ofwegen3, Peter Proksch4, Wenhan Lin1.
Abstract
Nine new compounds, namely sinularones A-I (1-9), characterized as cyclopentenone and butenolide-type analogues, were isolated from a soft coral Sinularia sp., together with a known butenolide (10). Their structures were elucidated by means of spectroscopic (IR, MS, 1D and 2D NMR, CD) analysis. The absolute configurations were determined on the basis of CD and specific rotation data in association with the computed electronic circular dichroism (ECD) by time dependent density functional theory (TD DFT) at 6-31+G(d,p)//DFT B3LYP/6-31+G(d,p) level. Compounds 1-2 and 7-10 showed potent antifouling activities against the barnacle Balanus amphitrite.Entities:
Keywords: Sinularia sp.; antifouling activity; sinularones A–I; soft coral; structural elucidation
Mesh:
Substances:
Year: 2012 PMID: 22822376 PMCID: PMC3397443 DOI: 10.3390/md10061331
Source DB: PubMed Journal: Mar Drugs ISSN: 1660-3397 Impact factor: 6.085
Figure 1Structures of compounds (1–10).
Figure 2Key COSY, HMBC and NOE relationships of (1).
Figure 3CD, electronic circular dichroism (ECD) and octant rule of (1).
1H NMR data of sinulactones A–H (1–8) (500 MHz, δH, J in Hz).
| No. | 1 a | 2 a | 3 a | 4 a | 5 a | 6 a | 7 a | 8 b |
|---|---|---|---|---|---|---|---|---|
| 2 | 2.08 d (16.4) | 2.18 s | 2.18 d (18.0) | |||||
| 2.16 d (16.4) | 2.18 s | 2.22 d (18.0) | ||||||
| 4 | 1.41 dd (11.5, 12.4) | 7.35 s | 7.35 s | |||||
| 1.84 dd (8.4, 12.4) | ||||||||
| 5 | 2.49 m | 2.89 dd (5.6, 8.4) | 3.11 dd (5.5, 10.2) | 2.55 t (6.5) | 1.91 ddd (6.0, 6.0, 17.0) | 1.97 ddd (7.8, 7.8, 15.5) | ||
| 2.32 ddd (6.0, 8.0, 17.0) | 2.22 m | |||||||
| 6 | 2.06 m | 2.35 dd (8.4, 16.0) | 2.49 dd (10.2, 15.5) | 1.45 m | 2.09 d (13.9) | 2.21 s | 2.49 ddd (6.0, 6.0, 18.0) | 2.24 m |
| 2.29 dd (4.2, 13.4) | 2.44 dd (5.6, 16.0) | 3.08 dd (5.5, 15.5) | 1.67 m | 2.27 d (13.9) | 2.21 s | 2.78 ddd (6.0, 8.0, 18.0) | 2.27 m | |
| 7 | 1.30 m | |||||||
| 1.46 m | ||||||||
| 8 | 5.12 t (7.2) | 1.54 ddd (4.0, 11.0, 12.0) | 1.79 ddd (4.7, 12.1, 13.5) | 1.30 m | 3.57 t (7.2) | 3.56 dd (7.4, 7.4) | 1.80 s | 1.77 s |
| 1.58 ddd (5.5, 11.0, 12.0) | 1.97 ddd (4.5, 12.1, 13.5) | 1.32 m | ||||||
| 9 | 2.16 ddt (7.2, 7.4, 12.0) | 0.53 m | 1.10 m | 0.88 t (7.2) | 1.75 m | 1.71 m | 1.96 s | 1.87 s |
| 2.19 ddt (7.2, 7.4, 12.0) | 0.66 m | 1.16 m | 1.80 m | 1.78 m | ||||
| 10 | 2.44 dd (7.4, 7.4) | 1.15 m | 1.29 m | 2.16 ddd (7.7, 10.6, 13.9) | 1.27 m | 1.30 m | ||
| 2.23 ddd (6.2, 10.3, 13.9) | 1.87 m | 1.87 m | ||||||
| 11 | 1.18 m | 1.29 m | 2.72 ddd (7.7, 10.3, 18.4) | 3.83 m | 3.86 m | |||
| 2.78 ddd (6.2, 10.6, 18.4) | ||||||||
| 12 | 2.07 s | 0.80 t (7.0) | 0.86 t (7.1) | 1.13 d (6.0) | 1.14 d (6.0) | |||
| 13 | 1.01 s | 1.62 s | 1.67 s | 1.65 s | 1.15 s | 1.15 s | ||
| 14 | 1.13 s | 1.90 s | 2.02 s | 1.97 s | 1.15 s | 1.15 s | ||
| 15 | 1.61 s | 0.87 s | 0.84 s | |||||
| EtO | 4.10 q (7.1) | 4.17 q (7.1) | 3.13 dq (7.0, 12.0) | |||||
| 1.21 t (7.1) | 1.27 t (7.1) | 3.24 dq (7.0, 12.0) | ||||||
| 1.09 t (7.0) | ||||||||
| 3.58 s | ||||||||
| OH-4 | 5.28 s | 5.26 s | ||||||
| OH-7 | 4.16 s | 4.16 s |
a In DMSO-d6, b In CDCl3.
13C NMR data of sinulactones A−H (1−8) (125 MHz, δC, mult.).
| No. | 1 a | 2 a | 3 a | 4 a | 5 a | 6 a | 7 a | 8 b |
|---|---|---|---|---|---|---|---|---|
| 1 | 220.0 C | 203.8 C | 204.9 C | 203.4 C | 209.4 C | 209.4 C | 171.8 C | 171.1 C |
| 2 | 52.8 CH2 | 134.3 C | 138.7 C | 136.4 C | 49.8 CH2 | 49.8 CH2 | 124.7 C | 127.1 C |
| 3 | 34.0 C | 170.0 C | 166.7 C | 164.9 C | 38.9 C | 38.9 C | 158.2 C | 156.7 C |
| 4 | 43.5 CH2 | 80.1 C | 92.4 C | 91.5 C | 170.8 C | 170.7 C | 105.5 C | 109.1 C |
| 5 | 46.7 CH | 55.3 CH | 46.4 CH | 54.5 CH | 138.8 C | 138.9 C | 31.3 CH2 | 31.3 CH2 |
| 6 | 32.3 CH2 | 29.6 CH2 | 32.3 CH2 | 24.8 CH2 | 33.5 CH2 | 32.2 CH2 | 28.9 CH2 | 28.0 CH2 |
| 7 | 133.9 C | 172.5 C | 174.9 C | 29.3 CH2 | 72.5 C | 72.3 C | 174.8 C | 172.9 C |
| 8 | 125.7 CH | 35.9 CH2 | 34.0 CH2 | 22.2 CH2 | 85.2 CH | 85.2 CH | 8.4 CH3 | 8.6 CH3 |
| 9 | 22.3 CH2 | 24.6 CH2 | 23.0 CH2 | 13.7 CH3 | 26.2 CH2 | 26.1 CH2 | 10.6 CH3 | 11.0 CH3 |
| 10 | 43.4 CH2 | 31.9 CH2 | 31.7 CH2 | 25.3 CH2 | 33.3 CH2 | 33.2 CH2 | ||
| 11 | 208.5 C | 22.3 CH2 | 22.3 CH2 | 28.7 CH2 | 75.3 CH | 75.2 CH | ||
| 12 | 30.2 CH3 | 14.3 CH3 | 14.3 CH3 | 176.1 C | 21.3 CH3 | 21.4 CH3 | ||
| 13 | 28.1 CH3 | 8.0 CH3 | 8.3 CH3 | 7.8 CH3 | 28.6 CH3 | 28.5 CH3 | ||
| 14 | 29.9 CH3 | 11.6 CH3 | 12.3 CH3 | 10.6 CH3 | 28.4 CH3 | 28.5 CH3 | ||
| 15 | 23.5 CH3 | 21.9 CH3 | 23.4 CH3 | |||||
| 16 | ||||||||
| 17 | ||||||||
| 18 | ||||||||
| EtO | 14.5 CH3 | 14.1 CH3 | 15.4 CH3 | |||||
| 60.5 CH2 | 61.5 CH2 | 58.4 CH2 | ||||||
| MeO | 51.9 CH3 |
a In DMSO-d6, b In CDCl3.
Figure 4CD and ECD spectra of (2).
Figure 5Cotton effect of (4).
The error patents of 13C NMR data of 6 and 5 in experiments and computations.
| Position | 6 | 5 | Δ | 6 * | 5 * | Δ |
|---|---|---|---|---|---|---|
| 1 | 209.4 | 209.4 | 0.0 | 206.0 | 205.8 | 0.2 |
| 2 | 49.8 | 49.8 | 0.0 | 49.2 | 49.2 | 0.0 |
| 3 | 38.9 | 38.9 | 0.0 | 41.9 | 42.0 | −0.1 |
| 4 | 170.7 | 170.8 | −0.1 | 171.2 | 171.1 | 0.1 |
| 5 | 138.9 | 138.8 | 0.1 | 142.8 | 142.5 | 0.3 |
| 6 | 32.2 | 33.5 | −1.3 | 32.7 | 39.8 | −7.1 |
| 7 | 72.3 | 72.5 | −0.2 | 72.4 | 72.7 | −0.3 |
| 8 | 85.2 | 85.2 | 0.0 | 84.8 | 84.1 | 0.7 |
| 9 | 26.1 | 26.2 | −0.1 | 27.2 | 27.4 | −0.2 |
| 10 | 33.2 | 33.3 | −0.1 | 34.3 | 34.7 | −0.4 |
| 11 | 75.2 | 75.3 | −0.1 | 75.7 | 75.8 | −0.1 |
| 12 | 21.4 | 21.3 | 0.1 | 18.5 | 18.6 | −0.1 |
| 13 | 28.5 | 28.6 | −0.1 | 26.2 | 26.4 | −0.2 |
| 14 | 28.5 | 28.4 | 0.1 | 26.2 | 26.2 | 0.0 |
| 15 | 23.4 | 21.9 | 1.5 | 24.4 | 17.4 | 7.0 |
6 *: calculated for 7S,8S,11S-isomer; 5*: calculated for 7R,8S,11S-isomer.
Antifouling activity of compounds against the larvae of barnacle B. amphitrite *.
| Compounds |
| ||
|---|---|---|---|
| EC50 (µg/mL) | LC50 (µg/mL) | LC50/EC50 | |
| 13.86 | >50 | >3.61 | |
| 23.50 | >50 | >2.13 | |
| 18.65 | >50 | >2.69 | |
| 21.39 | >50 | >2.34 | |
| 12.58 | >50 | >3.97 | |
| 3.84 | >50 | >13.02 | |
* EC50 represents the concentration of a compound where 50% of larval population was inhibited to settle compared to control, while LC50 represents the concentration of a compound required to kill 50% of larvae of a tested population.