Literature DB >> 22817747

Comparison of the yeast and human nuclear exosome complexes.

Katherine E Sloan1, Claudia Schneider, Nicholas J Watkins.   

Abstract

Most RNAs in eukaryotic cells are produced as precursors that undergo processing at the 3' and/or 5' end to generate the mature transcript. In addition, many transcripts are degraded not only as part of normal recycling, but also when recognized as aberrant by the RNA surveillance machinery. The exosome, a conserved multiprotein complex containing two nucleases, is involved in both the 3' processing and the turnover of many RNAs in the cell. A series of factors, including the TRAMP (Trf4-Air2-Mtr4 polyadenylation) complex, Mpp6 and Rrp47, help to define the targets to be processed and/or degraded and assist in exosome function. The majority of the data on the exosome and RNA maturation/decay have been derived from work performed in the yeast Saccharomyces cerevisiae. In the present paper, we provide an overview of the exosome and its role in RNA processing/degradation and discuss important new insights into exosome composition and function in human cells.

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Year:  2012        PMID: 22817747     DOI: 10.1042/BST20120061

Source DB:  PubMed          Journal:  Biochem Soc Trans        ISSN: 0300-5127            Impact factor:   5.407


  23 in total

1.  The ticking tail: daily oscillations in mRNA poly(A) tail length drive circadian cycles in protein synthesis.

Authors:  Ivana Gotic; Ueli Schibler
Journal:  Genes Dev       Date:  2012-12-15       Impact factor: 11.361

2.  Insight into the RNA Exosome Complex Through Modeling Pontocerebellar Hypoplasia Type 1b Disease Mutations in Yeast.

Authors:  Milo B Fasken; Jillian S Losh; Sara W Leung; Sergine Brutus; Brittany Avin; Jillian C Vaught; Jennifer Potter-Birriel; Taylor Craig; Graeme L Conn; Katherine Mills-Lujan; Anita H Corbett; Ambro van Hoof
Journal:  Genetics       Date:  2016-10-24       Impact factor: 4.562

Review 3.  Rrp6: Integrated roles in nuclear RNA metabolism and transcription termination.

Authors:  Melanie J Fox; Amber L Mosley
Journal:  Wiley Interdiscip Rev RNA       Date:  2015-11-26       Impact factor: 9.957

4.  The leucine-NH4+ uptake regulator Any1 limits growth as part of a general amino acid control response to loss of La protein by fission yeast.

Authors:  Vera Cherkasova; James R Iben; Kevin J Pridham; Alan C Kessler; Richard J Maraia
Journal:  PLoS One       Date:  2021-06-21       Impact factor: 3.240

Review 5.  An overview of pre-ribosomal RNA processing in eukaryotes.

Authors:  Anthony K Henras; Célia Plisson-Chastang; Marie-Françoise O'Donohue; Anirban Chakraborty; Pierre-Emmanuel Gleizes
Journal:  Wiley Interdiscip Rev RNA       Date:  2014-10-27       Impact factor: 9.957

6.  Nab3 facilitates the function of the TRAMP complex in RNA processing via recruitment of Rrp6 independent of Nrd1.

Authors:  Milo B Fasken; R Nicholas Laribee; Anita H Corbett
Journal:  PLoS Genet       Date:  2015-03-16       Impact factor: 5.917

7.  Rapid, optimized interactomic screening.

Authors:  Zhanna Hakhverdyan; Michal Domanski; Loren E Hough; Asha A Oroskar; Anil R Oroskar; Sarah Keegan; David J Dilworth; Kelly R Molloy; Vadim Sherman; John D Aitchison; David Fenyö; Brian T Chait; Torben Heick Jensen; Michael P Rout; John LaCava
Journal:  Nat Methods       Date:  2015-05-04       Impact factor: 28.547

8.  Certain adenylated non-coding RNAs, including 5' leader sequences of primary microRNA transcripts, accumulate in mouse cells following depletion of the RNA helicase MTR4.

Authors:  Jane E Dorweiler; Ting Ni; Jun Zhu; Stephen H Munroe; James T Anderson
Journal:  PLoS One       Date:  2014-06-13       Impact factor: 3.240

9.  EXOSC3 mutations in isolated cerebellar hypoplasia and spinal anterior horn involvement.

Authors:  Roberta Biancheri; Denise Cassandrini; Francesca Pinto; Rosanna Trovato; Maja Di Rocco; Marisol Mirabelli-Badenier; Marina Pedemonte; Chiara Panicucci; Holger Trucks; Thomas Sander; Federico Zara; Andrea Rossi; Pasquale Striano; Carlo Minetti; Filippo Maria Santorelli
Journal:  J Neurol       Date:  2013-04-07       Impact factor: 4.849

10.  The exosome controls alternative splicing by mediating the gene expression and assembly of the spliceosome complex.

Authors:  Lin Zhang; Yufeng Wan; Guobin Huang; Dongni Wang; Xinyang Yu; Guocun Huang; Jinhu Guo
Journal:  Sci Rep       Date:  2015-08-26       Impact factor: 4.379

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