Literature DB >> 22807880

2-(2-{[4-Oxo-3-(2-phenyl-eth-yl)-3,4-dihydro-quinazolin-2-yl]sulfan-yl}eth-yl)-2,3-dihydro-1H-isoindole-1,3-dione.

Adel S El-Azab, Alaa A-M Abdel-Aziz, Abdulrahman M Al-Obaid, Seik Weng Ng, Edward R T Tiekink.   

Abstract

In the title compound, C(26)H(21)N(3)O(3)S, the n class="Chemical">quinazolinyl group is essentially planar [r.m.s. deviation for the 10 non-H atoms = 0.057 Å]. The isoindoline-1,3-dione group is linked by an SCH(2)CH(2) chain to the pyrimidinyl C atom that lies between the two N atoms. Also, the phenyl group is linked by a CH(2)CH(2) chain at the N atom adjacent to the carbonyl group. This results in a conformation with these substituents lying to either side of the central quinazolinyl unit, with the former being approximately parallel [dihedral angle = 4.93 (7)°], and the phenyl group being inclined [dihedral angle = 71.61 (9)°] to the central quinazolinyl fused-ring system. In the crystal, mol-ecules are consolidated into a three-dimensional architecture by C-H⋯O inter-actions, involving all three carbonyl-O atoms, and π-π inter-actions occurring between the pyrimidinyl and isoindole-benzene rings [inter-centroid distance = 3.5330 (13) Å].

Entities:  

Year:  2012        PMID: 22807880      PMCID: PMC3393323          DOI: 10.1107/S1600536812025883

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis and drug discovery trials of quinazoline-4(3H)-one derivatives, see: El-Azab & ElTahir (2012 ▶); El-Azab et al. (2011 ▶). For the synthesis and anti­microbial activity of the title compound, see: El-Azab (2007 ▶). For a related structure, see: El-Emam et al. (2012 ▶).

Experimental

Crystal data

C26H21N3O3S M = 455.52 Triclinic, a = 8.7346 (4) Å b = 9.4464 (6) Å c = 13.7373 (8) Å α = 94.258 (5)° β = 103.505 (5)° γ = 105.227 (5)° V = 1052.27 (10) Å3 Z = 2 Cu Kα radiation μ = 1.66 mm−1 T = 100 K 0.25 × 0.15 × 0.02 mm

Data collection

Agilent SuperNova Dual diffractometer with Atlas detector Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012 ▶) T min = 0.511, T max = 1.000 7763 measured reflections 4329 independent reflections 3482 reflections with I > 2σ(I) R int = 0.042

Refinement

R[F 2 > 2σ(F 2)] = 0.049 wR(F 2) = 0.139 S = 1.03 4329 reflections 298 parameters H-atom parameters constrained Δρmax = 0.34 e Å−3 Δρmin = −0.36 e Å−3 Data collection: CrysAlis PRO (Agilent, 2012 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) general, I. DOI: 10.1107/S1600536812025883/sj5240sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812025883/sj5240Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812025883/sj5240Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C26H21N3O3SZ = 2
Mr = 455.52F(000) = 476
Triclinic, P1Dx = 1.438 Mg m3
Hall symbol: -P 1Cu Kα radiation, λ = 1.54184 Å
a = 8.7346 (4) ÅCell parameters from 2392 reflections
b = 9.4464 (6) Åθ = 3.3–76.4°
c = 13.7373 (8) ŵ = 1.66 mm1
α = 94.258 (5)°T = 100 K
β = 103.505 (5)°Prism, colourless
γ = 105.227 (5)°0.25 × 0.15 × 0.02 mm
V = 1052.27 (10) Å3
Agilent SuperNova Dual diffractometer with Atlas detector4329 independent reflections
Radiation source: SuperNova (Cu) X-ray Source3482 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.042
Detector resolution: 10.4041 pixels mm-1θmax = 76.6°, θmin = 3.3°
ω scanh = −8→10
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012)k = −10→11
Tmin = 0.511, Tmax = 1.000l = −17→14
7763 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.049Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.139H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0728P)2 + 0.0527P] where P = (Fo2 + 2Fc2)/3
4329 reflections(Δ/σ)max = 0.001
298 parametersΔρmax = 0.34 e Å3
0 restraintsΔρmin = −0.36 e Å3
xyzUiso*/Ueq
S10.78761 (6)0.81994 (5)0.66367 (4)0.02236 (15)
N30.2950 (2)0.71976 (19)0.53513 (14)0.0199 (4)
O11.09076 (18)1.22980 (17)0.94479 (12)0.0258 (3)
O20.23072 (19)0.93889 (16)0.56428 (13)0.0268 (4)
O30.27774 (18)0.47861 (16)0.47700 (12)0.0238 (3)
N10.7076 (2)1.06895 (19)0.69243 (13)0.0191 (4)
N20.9393 (2)1.04543 (19)0.81447 (13)0.0193 (4)
C10.7348 (2)1.2099 (2)0.74263 (16)0.0187 (4)
C20.6228 (3)1.2899 (2)0.70762 (17)0.0220 (4)
H20.52761.24530.65350.026*
C30.6521 (3)1.4336 (2)0.75257 (17)0.0231 (4)
H30.57621.48730.72910.028*
C40.7927 (3)1.5015 (2)0.83247 (17)0.0240 (4)
H40.81301.60120.86170.029*
C50.9006 (3)1.4224 (2)0.86799 (17)0.0225 (4)
H50.99561.46750.92220.027*
C60.8709 (2)1.2757 (2)0.82464 (16)0.0199 (4)
C70.9776 (2)1.1879 (2)0.86754 (16)0.0210 (4)
C81.0395 (2)0.9495 (2)0.85786 (16)0.0210 (4)
H8A0.97430.84430.83600.025*
H8B1.06580.96870.93260.025*
C91.1989 (3)0.9758 (2)0.82556 (17)0.0216 (4)
H9A1.17190.95050.75110.026*
H9B1.26011.08250.84330.026*
C101.3087 (2)0.8866 (2)0.87393 (15)0.0193 (4)
C111.4700 (3)0.9199 (2)0.86494 (17)0.0239 (4)
H111.50780.99810.82890.029*
C121.5760 (3)0.8415 (3)0.90749 (17)0.0264 (5)
H121.68520.86650.90050.032*
C131.5237 (3)0.7268 (2)0.96019 (17)0.0253 (4)
H131.59600.67230.98890.030*
C141.3643 (3)0.6925 (3)0.97044 (18)0.0265 (5)
H141.32730.61421.00660.032*
C151.2582 (3)0.7718 (2)0.92815 (17)0.0240 (4)
H151.14970.74740.93630.029*
C160.8090 (2)0.9957 (2)0.72786 (16)0.0190 (4)
C170.5972 (2)0.7934 (2)0.56824 (16)0.0208 (4)
H17A0.59990.88560.53790.025*
H17B0.58540.71340.51380.025*
C180.4493 (2)0.7530 (2)0.61288 (16)0.0223 (4)
H18A0.45200.66570.64820.027*
H18B0.45650.83660.66330.027*
C190.1975 (2)0.8162 (2)0.51785 (16)0.0199 (4)
C200.0496 (2)0.7337 (2)0.43459 (16)0.0194 (4)
C21−0.0828 (3)0.7789 (3)0.38598 (18)0.0249 (5)
H21−0.09210.87450.40470.030*
C22−0.2021 (3)0.6779 (3)0.30825 (18)0.0275 (5)
H22−0.29410.70580.27240.033*
C23−0.1893 (3)0.5362 (3)0.28182 (17)0.0256 (5)
H23−0.27310.46930.22900.031*
C24−0.0544 (3)0.4919 (2)0.33240 (17)0.0227 (4)
H24−0.04450.39600.31520.027*
C250.0634 (2)0.5941 (2)0.40831 (16)0.0199 (4)
C260.2207 (2)0.5824 (2)0.47360 (16)0.0196 (4)
U11U22U33U12U13U23
S10.0155 (3)0.0206 (2)0.0278 (3)0.00622 (19)0.00023 (19)−0.00159 (19)
N30.0141 (8)0.0202 (8)0.0234 (9)0.0042 (7)0.0026 (7)0.0012 (7)
O10.0174 (7)0.0328 (8)0.0219 (8)0.0062 (6)−0.0023 (6)−0.0011 (6)
O20.0250 (8)0.0216 (7)0.0323 (9)0.0062 (6)0.0072 (7)−0.0019 (6)
O30.0202 (7)0.0214 (7)0.0307 (8)0.0087 (6)0.0060 (6)0.0026 (6)
N10.0127 (8)0.0203 (8)0.0227 (9)0.0034 (6)0.0036 (7)0.0021 (7)
N20.0143 (8)0.0223 (8)0.0208 (9)0.0058 (7)0.0030 (7)0.0032 (7)
C10.0137 (9)0.0221 (9)0.0204 (10)0.0040 (7)0.0060 (8)0.0035 (8)
C20.0153 (10)0.0258 (10)0.0246 (11)0.0060 (8)0.0046 (8)0.0024 (8)
C30.0195 (10)0.0233 (10)0.0296 (11)0.0074 (8)0.0100 (9)0.0058 (8)
C40.0217 (10)0.0193 (9)0.0299 (11)0.0028 (8)0.0094 (9)−0.0006 (8)
C50.0187 (10)0.0246 (10)0.0225 (10)0.0031 (8)0.0061 (8)0.0018 (8)
C60.0152 (9)0.0235 (10)0.0211 (10)0.0047 (8)0.0063 (8)0.0032 (8)
C70.0137 (9)0.0256 (10)0.0220 (10)0.0029 (8)0.0051 (8)0.0015 (8)
C80.0143 (9)0.0256 (10)0.0232 (10)0.0079 (8)0.0018 (8)0.0048 (8)
C90.0172 (10)0.0257 (10)0.0223 (10)0.0075 (8)0.0042 (8)0.0048 (8)
C100.0150 (9)0.0228 (9)0.0179 (10)0.0049 (7)0.0018 (7)0.0000 (8)
C110.0181 (10)0.0303 (11)0.0229 (11)0.0053 (8)0.0063 (8)0.0038 (8)
C120.0152 (10)0.0356 (12)0.0285 (12)0.0078 (9)0.0061 (8)0.0019 (9)
C130.0191 (10)0.0288 (10)0.0263 (11)0.0096 (8)0.0011 (8)0.0007 (9)
C140.0220 (11)0.0288 (11)0.0300 (12)0.0086 (9)0.0071 (9)0.0067 (9)
C150.0153 (10)0.0284 (10)0.0290 (11)0.0060 (8)0.0073 (8)0.0052 (9)
C160.0141 (9)0.0221 (9)0.0191 (10)0.0038 (7)0.0037 (8)0.0015 (8)
C170.0147 (9)0.0202 (9)0.0237 (10)0.0038 (8)0.0004 (8)−0.0005 (8)
C180.0154 (10)0.0253 (10)0.0234 (11)0.0043 (8)0.0011 (8)0.0036 (8)
C190.0179 (10)0.0212 (9)0.0221 (10)0.0058 (8)0.0078 (8)0.0029 (8)
C200.0137 (9)0.0222 (9)0.0221 (10)0.0036 (7)0.0060 (8)0.0036 (8)
C210.0210 (11)0.0286 (10)0.0300 (12)0.0114 (9)0.0101 (9)0.0080 (9)
C220.0170 (10)0.0390 (12)0.0286 (12)0.0103 (9)0.0056 (9)0.0112 (10)
C230.0139 (10)0.0371 (12)0.0217 (11)0.0026 (9)0.0030 (8)0.0028 (9)
C240.0176 (10)0.0255 (10)0.0240 (11)0.0035 (8)0.0072 (8)0.0014 (8)
C250.0148 (9)0.0239 (10)0.0236 (10)0.0069 (8)0.0077 (8)0.0057 (8)
C260.0148 (10)0.0216 (9)0.0222 (10)0.0037 (8)0.0064 (8)0.0019 (8)
S1—C161.764 (2)C9—H9B0.9900
S1—C171.806 (2)C10—C151.396 (3)
N3—C191.399 (3)C10—C111.398 (3)
N3—C261.399 (3)C11—C121.386 (3)
N3—C181.453 (3)C11—H110.9500
O1—C71.226 (3)C12—C131.385 (3)
O2—C191.209 (3)C12—H120.9500
O3—C261.210 (3)C13—C141.388 (3)
N1—C161.293 (3)C13—H130.9500
N1—C11.388 (3)C14—C151.391 (3)
N2—C161.391 (3)C14—H140.9500
N2—C71.400 (3)C15—H150.9500
N2—C81.481 (3)C17—C181.528 (3)
C1—C61.397 (3)C17—H17A0.9900
C1—C21.408 (3)C17—H17B0.9900
C2—C31.381 (3)C18—H18A0.9900
C2—H20.9500C18—H18B0.9900
C3—C41.406 (3)C19—C201.494 (3)
C3—H30.9500C20—C211.380 (3)
C4—C51.376 (3)C20—C251.385 (3)
C4—H40.9500C21—C221.394 (3)
C5—C61.399 (3)C21—H210.9500
C5—H50.9500C22—C231.401 (3)
C6—C71.458 (3)C22—H220.9500
C8—C91.524 (3)C23—C241.402 (3)
C8—H8A0.9900C23—H230.9500
C8—H8B0.9900C24—C251.381 (3)
C9—C101.510 (3)C24—H240.9500
C9—H9A0.9900C25—C261.491 (3)
C16—S1—C17100.25 (10)C11—C12—H12119.8
C19—N3—C26112.02 (17)C12—C13—C14119.1 (2)
C19—N3—C18124.36 (17)C12—C13—H13120.5
C26—N3—C18123.46 (18)C14—C13—H13120.5
C16—N1—C1117.35 (18)C13—C14—C15120.5 (2)
C16—N2—C7121.09 (18)C13—C14—H14119.7
C16—N2—C8122.24 (17)C15—C14—H14119.7
C7—N2—C8116.61 (17)C14—C15—C10121.03 (19)
N1—C1—C6122.29 (19)C14—C15—H15119.5
N1—C1—C2118.41 (18)C10—C15—H15119.5
C6—C1—C2119.28 (19)N1—C16—N2124.87 (18)
C3—C2—C1119.5 (2)N1—C16—S1119.56 (16)
C3—C2—H2120.2N2—C16—S1115.56 (15)
C1—C2—H2120.2C18—C17—S1111.35 (15)
C2—C3—C4121.0 (2)C18—C17—H17A109.4
C2—C3—H3119.5S1—C17—H17A109.4
C4—C3—H3119.5C18—C17—H17B109.4
C5—C4—C3119.5 (2)S1—C17—H17B109.4
C5—C4—H4120.3H17A—C17—H17B108.0
C3—C4—H4120.3N3—C18—C17111.64 (17)
C4—C5—C6120.3 (2)N3—C18—H18A109.3
C4—C5—H5119.9C17—C18—H18A109.3
C6—C5—H5119.9N3—C18—H18B109.3
C1—C6—C5120.4 (2)C17—C18—H18B109.3
C1—C6—C7119.29 (19)H18A—C18—H18B108.0
C5—C6—C7120.27 (19)O2—C19—N3124.9 (2)
O1—C7—N2120.6 (2)O2—C19—C20129.5 (2)
O1—C7—C6124.7 (2)N3—C19—C20105.56 (17)
N2—C7—C6114.63 (18)C21—C20—C25121.8 (2)
N2—C8—C9112.36 (17)C21—C20—C19129.78 (19)
N2—C8—H8A109.1C25—C20—C19108.38 (18)
C9—C8—H8A109.1C20—C21—C22117.0 (2)
N2—C8—H8B109.1C20—C21—H21121.5
C9—C8—H8B109.1C22—C21—H21121.5
H8A—C8—H8B107.9C21—C22—C23121.4 (2)
C10—C9—C8113.56 (17)C21—C22—H22119.3
C10—C9—H9A108.9C23—C22—H22119.3
C8—C9—H9A108.9C22—C23—C24120.8 (2)
C10—C9—H9B108.9C22—C23—H23119.6
C8—C9—H9B108.9C24—C23—H23119.6
H9A—C9—H9B107.7C25—C24—C23116.9 (2)
C15—C10—C11117.5 (2)C25—C24—H24121.6
C15—C10—C9123.52 (18)C23—C24—H24121.6
C11—C10—C9118.96 (19)C24—C25—C20122.1 (2)
C12—C11—C10121.5 (2)C24—C25—C26129.8 (2)
C12—C11—H11119.3C20—C25—C26108.15 (18)
C10—C11—H11119.3O3—C26—N3124.6 (2)
C13—C12—C11120.4 (2)O3—C26—C25129.6 (2)
C13—C12—H12119.8N3—C26—C25105.84 (17)
C16—N1—C1—C63.7 (3)C8—N2—C16—N1172.78 (19)
C16—N1—C1—C2−177.81 (18)C7—N2—C16—S1174.78 (14)
N1—C1—C2—C3−176.32 (18)C8—N2—C16—S1−8.0 (2)
C6—C1—C2—C32.2 (3)C17—S1—C16—N1−6.58 (19)
C1—C2—C3—C40.3 (3)C17—S1—C16—N2174.18 (15)
C2—C3—C4—C5−1.6 (3)C16—S1—C17—C18−75.70 (16)
C3—C4—C5—C60.3 (3)C19—N3—C18—C17−103.6 (2)
N1—C1—C6—C5174.95 (18)C26—N3—C18—C1781.3 (2)
C2—C1—C6—C5−3.5 (3)S1—C17—C18—N3−175.35 (14)
N1—C1—C6—C7−7.8 (3)C26—N3—C19—O2176.6 (2)
C2—C1—C6—C7173.73 (18)C18—N3—C19—O21.1 (3)
C4—C5—C6—C12.3 (3)C26—N3—C19—C20−2.2 (2)
C4—C5—C6—C7−174.93 (19)C18—N3—C19—C20−177.75 (17)
C16—N2—C7—O1178.66 (18)O2—C19—C20—C213.7 (4)
C8—N2—C7—O11.3 (3)N3—C19—C20—C21−177.6 (2)
C16—N2—C7—C60.1 (3)O2—C19—C20—C25−177.4 (2)
C8—N2—C7—C6−177.24 (16)N3—C19—C20—C251.3 (2)
C1—C6—C7—O1−172.93 (19)C25—C20—C21—C22−0.5 (3)
C5—C6—C7—O14.3 (3)C19—C20—C21—C22178.3 (2)
C1—C6—C7—N25.6 (3)C20—C21—C22—C230.9 (3)
C5—C6—C7—N2−177.19 (18)C21—C22—C23—C24−0.6 (3)
C16—N2—C8—C997.7 (2)C22—C23—C24—C25−0.1 (3)
C7—N2—C8—C9−85.0 (2)C23—C24—C25—C200.6 (3)
N2—C8—C9—C10176.31 (17)C23—C24—C25—C26−178.4 (2)
C8—C9—C10—C1511.0 (3)C21—C20—C25—C24−0.3 (3)
C8—C9—C10—C11−168.71 (19)C19—C20—C25—C24−179.33 (18)
C15—C10—C11—C120.5 (3)C21—C20—C25—C26178.95 (18)
C9—C10—C11—C12−179.8 (2)C19—C20—C25—C26−0.1 (2)
C10—C11—C12—C130.2 (3)C19—N3—C26—O3−177.16 (19)
C11—C12—C13—C14−0.5 (3)C18—N3—C26—O3−1.5 (3)
C12—C13—C14—C150.2 (3)C19—N3—C26—C252.1 (2)
C13—C14—C15—C100.5 (3)C18—N3—C26—C25177.73 (17)
C11—C10—C15—C14−0.8 (3)C24—C25—C26—O3−2.8 (4)
C9—C10—C15—C14179.5 (2)C20—C25—C26—O3178.1 (2)
C1—N1—C16—N22.5 (3)C24—C25—C26—N3178.0 (2)
C1—N1—C16—S1−176.67 (14)C20—C25—C26—N3−1.2 (2)
C7—N2—C16—N1−4.4 (3)
D—H···AD—HH···AD···AD—H···A
C13—H13···O1i0.952.563.218 (3)127
C17—H17B···O3ii0.992.423.120 (2)128
C21—H21···O2iii0.952.453.346 (3)157
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C13—H13⋯O1i 0.952.563.218 (3)127
C17—H17B⋯O3ii 0.992.423.120 (2)128
C21—H21⋯O2iii 0.952.453.346 (3)157

Symmetry codes: (i) ; (ii) ; (iii) .

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Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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