Literature DB >> 22807846

3-[(E)-Benzyl-idene]indolin-2-one.

Abdullah M Asiri, Mohie E M Zayed, Seik Weng Ng, Edward R T Tiekink.   

Abstract

In the title indolin-2-one derivative, C(15)H(11)NO, the phenyl ring and the oxoindoline fused-ring system (r.m.s. deviation = 0.011 Å) are aligned at 48.52 (6)°. In the crystal, inversion-related mol-ecules form an N-H⋯O hydrogen-bonded dimer via an eight-membered {⋯HNCO}(2) synthon. The dimeric aggregates are linked into a three-dimensional architecture via C-H⋯O and π-π inter-actions between the five- and six-membered rings of the fused ring system, with an inter-centroid distance of 3.4538 (8) Å.

Entities:  

Year:  2012        PMID: 22807846      PMCID: PMC3393289          DOI: 10.1107/S1600536812024762

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the structure of the Z-isomer of the title compound, see: Milanesio et al. (2000 ▶). For background to related thia­zoles, see: Badahdaha et al. (2009 ▶).

Experimental

Crystal data

C15H11NO M = 221.25 Monoclinic, a = 3.9796 (3) Å b = 22.2266 (19) Å c = 12.2484 (10) Å β = 95.027 (1)° V = 1079.24 (15) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 100 K 0.30 × 0.20 × 0.10 mm

Data collection

Bruker SMART APEX diffractometer 6831 measured reflections 2460 independent reflections 2153 reflections with I > 2σ(I) R int = 0.023

Refinement

R[F 2 > 2σ(F 2)] = 0.038 wR(F 2) = 0.107 S = 1.03 2460 reflections 158 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.27 e Å−3 Δρmin = −0.26 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812024762/mw2072sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812024762/mw2072Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812024762/mw2072Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H11NOF(000) = 464
Mr = 221.25Dx = 1.362 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 3166 reflections
a = 3.9796 (3) Åθ = 2.5–28.3°
b = 22.2266 (19) ŵ = 0.09 mm1
c = 12.2484 (10) ÅT = 100 K
β = 95.027 (1)°Prism, orange
V = 1079.24 (15) Å30.30 × 0.20 × 0.10 mm
Z = 4
Bruker SMART APEX diffractometer2153 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.023
Graphite monochromatorθmax = 27.5°, θmin = 1.8°
ω scansh = −3→5
6831 measured reflectionsk = −28→28
2460 independent reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.038Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.107H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.0633P)2 + 0.2809P] where P = (Fo2 + 2Fc2)/3
2460 reflections(Δ/σ)max = 0.001
158 parametersΔρmax = 0.27 e Å3
1 restraintΔρmin = −0.26 e Å3
xyzUiso*/Ueq
O10.5372 (2)0.58258 (4)0.53379 (7)0.0236 (2)
N10.7366 (3)0.52725 (4)0.39388 (8)0.0183 (2)
H1N0.668 (4)0.4920 (5)0.4133 (12)0.032 (4)*
C10.8893 (3)0.53924 (5)0.29780 (9)0.0167 (2)
C20.9905 (3)0.49792 (5)0.22291 (10)0.0194 (3)
H20.95560.45600.23210.023*
C31.1456 (3)0.52014 (6)0.13341 (10)0.0211 (3)
H31.21940.49290.08080.025*
C41.1938 (3)0.58149 (6)0.11990 (10)0.0207 (3)
H41.29870.59560.05800.025*
C51.0897 (3)0.62256 (5)0.19619 (9)0.0184 (2)
H51.12410.66450.18660.022*
C60.9350 (3)0.60162 (5)0.28646 (9)0.0159 (2)
C70.8052 (3)0.62991 (5)0.38267 (9)0.0167 (2)
C80.6761 (3)0.57888 (5)0.44818 (9)0.0180 (3)
C90.7925 (3)0.68631 (5)0.42166 (9)0.0176 (2)
H90.71750.69010.49290.021*
C100.8793 (3)0.74284 (5)0.36866 (9)0.0167 (2)
C110.7759 (3)0.75418 (5)0.25856 (9)0.0179 (2)
H110.65400.72430.21610.021*
C120.8496 (3)0.80862 (5)0.21070 (10)0.0194 (3)
H120.77560.81600.13600.023*
C131.0311 (3)0.85235 (5)0.27155 (10)0.0199 (3)
H131.08620.88920.23820.024*
C141.1317 (3)0.84202 (5)0.38124 (10)0.0203 (3)
H141.25570.87190.42310.024*
C151.0516 (3)0.78813 (5)0.43000 (9)0.0191 (3)
H151.11450.78190.50580.023*
U11U22U33U12U13U23
O10.0347 (5)0.0183 (4)0.0189 (4)−0.0028 (4)0.0088 (4)0.0011 (3)
N10.0234 (5)0.0130 (5)0.0186 (5)−0.0015 (4)0.0024 (4)0.0020 (4)
C10.0150 (5)0.0178 (6)0.0167 (5)0.0001 (4)−0.0015 (4)0.0013 (4)
C20.0178 (5)0.0177 (6)0.0222 (6)0.0018 (4)−0.0010 (4)−0.0010 (4)
C30.0191 (5)0.0246 (6)0.0193 (6)0.0039 (5)0.0001 (4)−0.0044 (5)
C40.0179 (5)0.0265 (6)0.0179 (6)0.0008 (5)0.0019 (4)0.0008 (5)
C50.0164 (5)0.0190 (6)0.0196 (6)−0.0018 (4)0.0008 (4)0.0016 (4)
C60.0146 (5)0.0163 (5)0.0163 (5)−0.0004 (4)−0.0017 (4)−0.0002 (4)
C70.0177 (5)0.0170 (6)0.0153 (5)−0.0017 (4)0.0004 (4)0.0025 (4)
C80.0209 (6)0.0157 (6)0.0171 (5)−0.0015 (4)−0.0006 (4)0.0016 (4)
C90.0200 (5)0.0180 (6)0.0148 (5)−0.0005 (4)0.0020 (4)0.0006 (4)
C100.0172 (5)0.0146 (5)0.0188 (5)0.0008 (4)0.0046 (4)−0.0005 (4)
C110.0183 (5)0.0164 (5)0.0189 (6)−0.0009 (4)0.0018 (4)−0.0009 (4)
C120.0200 (6)0.0202 (6)0.0181 (5)0.0015 (4)0.0032 (4)0.0022 (4)
C130.0196 (6)0.0151 (5)0.0255 (6)−0.0002 (4)0.0058 (4)0.0028 (4)
C140.0214 (6)0.0152 (5)0.0244 (6)−0.0020 (4)0.0025 (4)−0.0038 (4)
C150.0224 (6)0.0182 (6)0.0167 (5)0.0015 (4)0.0018 (4)−0.0013 (4)
O1—C81.2302 (14)C7—C91.3439 (16)
N1—C81.3585 (15)C7—C81.5054 (15)
N1—C11.3968 (14)C9—C101.4693 (15)
N1—H1N0.87 (1)C9—H90.9500
C1—C21.3825 (16)C10—C111.3978 (16)
C1—C61.4068 (16)C10—C151.3993 (16)
C2—C31.3946 (17)C11—C121.3871 (16)
C2—H20.9500C11—H110.9500
C3—C41.3890 (18)C12—C131.3884 (17)
C3—H30.9500C12—H120.9500
C4—C51.3950 (16)C13—C141.3871 (17)
C4—H40.9500C13—H130.9500
C5—C61.3919 (15)C14—C151.3881 (16)
C5—H50.9500C14—H140.9500
C6—C71.4689 (15)C15—H150.9500
C8—N1—C1111.10 (9)O1—C8—N1125.86 (10)
C8—N1—H1N123.7 (11)O1—C8—C7127.13 (10)
C1—N1—H1N124.9 (11)N1—C8—C7106.99 (10)
C2—C1—N1127.28 (11)C7—C9—C10128.54 (10)
C2—C1—C6122.79 (11)C7—C9—H9115.7
N1—C1—C6109.93 (10)C10—C9—H9115.7
C1—C2—C3117.44 (11)C11—C10—C15118.50 (10)
C1—C2—H2121.3C11—C10—C9121.32 (10)
C3—C2—H2121.3C15—C10—C9120.08 (10)
C4—C3—C2121.10 (11)C12—C11—C10120.65 (11)
C4—C3—H3119.4C12—C11—H11119.7
C2—C3—H3119.4C10—C11—H11119.7
C3—C4—C5120.69 (11)C13—C12—C11120.20 (11)
C3—C4—H4119.7C13—C12—H12119.9
C5—C4—H4119.7C11—C12—H12119.9
C4—C5—C6119.42 (11)C14—C13—C12119.78 (11)
C4—C5—H5120.3C14—C13—H13120.1
C6—C5—H5120.3C12—C13—H13120.1
C5—C6—C1118.55 (10)C13—C14—C15120.12 (11)
C5—C6—C7134.85 (11)C13—C14—H14119.9
C1—C6—C7106.56 (10)C15—C14—H14119.9
C9—C7—C6135.33 (11)C14—C15—C10120.67 (11)
C9—C7—C8119.22 (10)C14—C15—H15119.7
C6—C7—C8105.40 (9)C10—C15—H15119.7
C8—N1—C1—C2179.20 (11)C1—N1—C8—C7−0.80 (13)
C8—N1—C1—C60.09 (13)C9—C7—C8—O14.54 (18)
N1—C1—C2—C3−178.59 (11)C6—C7—C8—O1−177.79 (11)
C6—C1—C2—C30.41 (16)C9—C7—C8—N1−176.49 (10)
C1—C2—C3—C4−0.48 (17)C6—C7—C8—N11.18 (12)
C2—C3—C4—C50.40 (17)C6—C7—C9—C108.2 (2)
C3—C4—C5—C6−0.23 (17)C8—C7—C9—C10−175.00 (11)
C4—C5—C6—C10.15 (16)C7—C9—C10—C1143.93 (18)
C4—C5—C6—C7177.75 (11)C7—C9—C10—C15−139.89 (13)
C2—C1—C6—C5−0.25 (16)C15—C10—C11—C121.47 (17)
N1—C1—C6—C5178.91 (10)C9—C10—C11—C12177.71 (10)
C2—C1—C6—C7−178.47 (10)C10—C11—C12—C130.77 (17)
N1—C1—C6—C70.68 (12)C11—C12—C13—C14−1.57 (17)
C5—C6—C7—C9−1.8 (2)C12—C13—C14—C150.09 (18)
C1—C6—C7—C9175.99 (13)C13—C14—C15—C102.20 (18)
C5—C6—C7—C8−178.91 (12)C11—C10—C15—C14−2.95 (17)
C1—C6—C7—C8−1.11 (11)C9—C10—C15—C14−179.24 (10)
C1—N1—C8—O1178.19 (11)
D—H···AD—HH···AD···AD—H···A
N1—H1N···O1i0.87 (1)1.98 (1)2.846 (1)172 (2)
C13—H13···O1ii0.952.573.2535 (15)129
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1N⋯O1i 0.87 (1)1.98 (1)2.846 (1)172 (2)
C13—H13⋯O1ii 0.952.573.2535 (15)129

Symmetry codes: (i) ; (ii) .

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