Literature DB >> 22807775

Dichlorido[methyl 2-(quinolin-8-yl-oxy-κ(2)N,O)acetate-κO]mercury(II).

Yu-Hong Wang1, Xue-Hua Zhu, Rui-Feng Song.   

Abstract

In the neutral title complex, [HgCl(2)(C(12)H(11)NO(3))], the Hg(II) ion is penta-coordinated by two Cl atoms, one N atom and two weakly coordinating O atoms from the methyl 2-(quinolin-8-yl-oxy)acetate ligand. The coordination around the Hg(II) ion may be described as highly distorted trigonal-bipyramidal. Centrosymmetric dimers are formed by an additional weak Hg⋯Cl inter-action, leading to a distorted octa-hedral coordination geometry around the Hg(II) ion.

Entities:  

Year:  2012        PMID: 22807775      PMCID: PMC3393207          DOI: 10.1107/S1600536812026591

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the use of quinolin-8-yl­oxy acetic acid and its derivatives as ligands in transition metal complexes, see: Cheng et al. (2007 ▶); Song et al. (2004 ▶); Wang et al. (2005 ▶, 2008 ▶).

Experimental

Crystal data

[HgCl2(C12H11NO3)] M = 488.71 Triclinic, a = 7.2644 (4) Å b = 9.7607 (2) Å c = 10.8411 (6) Å α = 71.317 (7)° β = 75.453 (7)° γ = 69.816 (8)° V = 674.87 (5) Å3 Z = 2 Mo Kα radiation μ = 11.80 mm−1 T = 223 K 0.50 × 0.25 × 0.10 mm

Data collection

Rigaku Saturn diffractometer Absorption correction: multi-scan (REQAB; Jacobson, 1998 ▶) T min = 0.067, T max = 0.385 5090 measured reflections 2432 independent reflections 2330 reflections with I > 2σ(I) R int = 0.050

Refinement

R[F 2 > 2σ(F 2)] = 0.052 wR(F 2) = 0.142 S = 1.07 2432 reflections 174 parameters H-atom parameters constrained Δρmax = 3.58 e Å−3 Δρmin = −2.39 e Å−3 Data collection: CrystalClear (Rigaku/MSC, 2001 ▶); cell refinement: CrystalClear; data reduction: CrystalStructure (Rigaku/MSC, 2004 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812026591/im2385sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812026591/im2385Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[HgCl2(C12H11NO3)]Z = 2
Mr = 488.71F(000) = 456
Triclinic, P1Dx = 2.405 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71075 Å
a = 7.2644 (4) ÅCell parameters from 3438 reflections
b = 9.7607 (2) Åθ = 3.0–27.5°
c = 10.8411 (6) ŵ = 11.80 mm1
α = 71.317 (7)°T = 223 K
β = 75.453 (7)°Prism, yellow
γ = 69.816 (8)°0.50 × 0.25 × 0.10 mm
V = 674.87 (5) Å3
Rigaku Saturn diffractometer2432 independent reflections
Radiation source: fine-focus sealed tube2330 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.050
Detector resolution: 14.63 pixels mm-1θmax = 25.5°, θmin = 3.0°
ω scansh = −8→8
Absorption correction: multi-scan (REQAB; Jacobson, 1998)k = −11→9
Tmin = 0.067, Tmax = 0.385l = −13→10
5090 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.052Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.142H-atom parameters constrained
S = 1.07w = 1/[σ2(Fo2) + (0.114P)2] where P = (Fo2 + 2Fc2)/3
2432 reflections(Δ/σ)max = 0.001
174 parametersΔρmax = 3.58 e Å3
0 restraintsΔρmin = −2.39 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Hg10.48080 (4)0.17195 (3)0.82524 (2)0.0283 (2)
Cl10.7584 (4)0.0079 (3)0.9214 (2)0.0343 (5)
Cl20.2251 (4)0.2330 (3)0.7032 (2)0.0328 (5)
O10.5887 (9)0.4276 (6)0.6794 (5)0.0267 (12)
O20.9795 (10)0.3004 (7)0.4386 (6)0.0293 (13)
O30.7782 (11)0.1803 (7)0.5930 (6)0.0350 (15)
N10.3624 (11)0.3914 (8)0.9197 (6)0.0229 (14)
C10.2572 (13)0.3719 (9)1.0411 (8)0.0250 (17)
H10.24850.27441.08830.030*
C20.1591 (14)0.4918 (11)1.1008 (8)0.0291 (19)
H20.09290.47271.18820.035*
C30.1596 (13)0.6348 (10)1.0327 (8)0.0280 (18)
H30.08920.71601.07070.034*
C40.2680 (12)0.6597 (9)0.9034 (7)0.0229 (16)
C50.2793 (15)0.8066 (10)0.8262 (9)0.032 (2)
H50.21020.89150.85950.038*
C60.3906 (15)0.8224 (9)0.7043 (9)0.0306 (19)
H60.39950.91890.65410.037*
C70.4920 (14)0.6985 (10)0.6522 (8)0.0288 (19)
H70.56490.71330.56650.035*
C80.4873 (13)0.5564 (9)0.7230 (8)0.0232 (16)
C90.3727 (12)0.5317 (9)0.8506 (7)0.0226 (16)
C100.7341 (16)0.4428 (10)0.5679 (8)0.030 (2)
H10A0.83390.47870.58420.037*
H10B0.67370.51640.49270.037*
C110.8301 (13)0.2914 (9)0.5380 (7)0.0221 (16)
C121.0873 (14)0.1595 (10)0.3990 (9)0.0313 (19)
H12A1.14890.08410.47170.047*
H12B1.18900.17800.32360.047*
H12C0.99530.12340.37560.047*
U11U22U33U12U13U23
Hg10.0304 (3)0.0247 (3)0.0247 (3)−0.00519 (19)−0.00101 (17)−0.00514 (17)
Cl10.0304 (12)0.0320 (12)0.0350 (11)−0.0028 (10)−0.0050 (9)−0.0083 (9)
Cl20.0360 (13)0.0344 (11)0.0255 (10)−0.0096 (10)−0.0038 (9)−0.0057 (8)
O10.027 (3)0.025 (3)0.022 (3)−0.011 (3)0.017 (2)−0.009 (2)
O20.030 (3)0.025 (3)0.028 (3)−0.006 (3)0.010 (3)−0.012 (2)
O30.041 (4)0.025 (3)0.034 (3)−0.013 (3)0.014 (3)−0.012 (2)
N10.027 (4)0.023 (3)0.019 (3)−0.008 (3)0.002 (3)−0.009 (3)
C10.024 (4)0.030 (4)0.021 (4)−0.007 (4)0.000 (3)−0.009 (3)
C20.029 (5)0.039 (5)0.019 (4)−0.012 (4)0.005 (4)−0.012 (3)
C30.018 (4)0.038 (5)0.030 (4)−0.005 (4)0.003 (3)−0.019 (4)
C40.020 (4)0.024 (4)0.022 (4)−0.001 (3)0.002 (3)−0.011 (3)
C50.041 (6)0.025 (4)0.034 (4)−0.012 (4)0.000 (4)−0.014 (4)
C60.034 (5)0.017 (4)0.034 (5)−0.004 (4)−0.003 (4)−0.003 (3)
C70.035 (5)0.028 (4)0.022 (4)−0.009 (4)−0.002 (4)−0.005 (3)
C80.021 (4)0.020 (4)0.024 (4)−0.003 (3)0.003 (3)−0.009 (3)
C90.018 (4)0.030 (4)0.020 (3)−0.006 (3)−0.001 (3)−0.009 (3)
C100.041 (6)0.032 (5)0.018 (4)−0.015 (4)0.010 (4)−0.012 (3)
C110.023 (4)0.024 (4)0.019 (4)−0.009 (3)0.005 (3)−0.008 (3)
C120.023 (5)0.029 (5)0.035 (5)−0.002 (4)0.011 (4)−0.018 (4)
Hg1—Cl12.340 (2)C3—C41.416 (12)
Hg1—Cl22.350 (2)C3—H30.9400
Hg1—N12.463 (6)C4—C91.432 (11)
Hg1—O12.746 (6)C4—C51.428 (12)
Hg1—O32.876 (6)C5—C61.357 (13)
Hg1—Cl1i3.204 (2)C5—H50.9400
O1—C81.383 (10)C6—C71.392 (13)
O1—C101.396 (10)C6—H60.9400
O2—C111.329 (10)C7—C81.361 (12)
O2—C121.468 (10)C7—H70.9400
O3—C111.195 (10)C8—C91.418 (11)
N1—C11.337 (11)C10—C111.502 (12)
N1—C91.352 (11)C10—H10A0.9800
C1—C21.405 (12)C10—H10B0.9800
C1—H10.9400C12—H12A0.9700
C2—C31.355 (14)C12—H12B0.9700
C2—H20.9400C12—H12C0.9700
Cl1—Hg1—Cl2153.41 (8)C3—C4—C5122.3 (7)
Cl1—Hg1—N1106.61 (17)C9—C4—C5119.5 (7)
Cl2—Hg1—N199.30 (17)C6—C5—C4119.5 (8)
Cl1—Hg1—O1105.43 (15)C6—C5—H5120.3
Cl2—Hg1—O191.75 (15)C4—C5—H5120.3
N1—Hg1—O162.08 (19)C5—C6—C7121.3 (8)
Cl1—Hg1—O380.81 (15)C5—C6—H6119.4
Cl2—Hg1—O392.53 (16)C7—C6—H6119.4
N1—Hg1—O3117.7 (2)C8—C7—C6121.2 (8)
O1—Hg1—O356.55 (16)C8—C7—H7119.4
Cl1—Hg1—Cl1i83.50 (8)C6—C7—H7119.4
Cl2—Hg1—Cl1i90.92 (7)C7—C8—O1124.5 (7)
N1—Hg1—Cl1i89.63 (16)C7—C8—C9120.5 (7)
O1—Hg1—Cl1i151.64 (12)O1—C8—C9115.1 (7)
O3—Hg1—Cl1i151.45 (13)N1—C9—C8120.7 (7)
C8—O1—C10116.4 (6)N1—C9—C4121.2 (7)
C8—O1—Hg1115.6 (4)C8—C9—C4118.0 (7)
C10—O1—Hg1128.0 (5)O1—C10—C11108.5 (7)
C11—O2—C12115.3 (7)O1—C10—H10A110.0
C11—O3—Hg1121.0 (5)C11—C10—H10A110.0
C1—N1—C9119.1 (7)O1—C10—H10B110.0
C1—N1—Hg1116.1 (5)C11—C10—H10B110.0
C9—N1—Hg1124.1 (5)H10A—C10—H10B108.4
N1—C1—C2122.4 (8)O3—C11—O2124.9 (8)
N1—C1—H1118.8O3—C11—C10125.5 (8)
C2—C1—H1118.8O2—C11—C10109.6 (7)
C3—C2—C1120.2 (8)O2—C12—H12A109.5
C3—C2—H2119.9O2—C12—H12B109.5
C1—C2—H2119.9H12A—C12—H12B109.5
C2—C3—C4118.8 (8)O2—C12—H12C109.5
C2—C3—H3120.6H12A—C12—H12C109.5
C4—C3—H3120.6H12B—C12—H12C109.5
C3—C4—C9118.2 (7)
Cl1—Hg1—O1—C8−113.6 (5)C3—C4—C5—C6178.0 (9)
Cl2—Hg1—O1—C886.9 (5)C9—C4—C5—C6−0.6 (13)
N1—Hg1—O1—C8−12.7 (5)C4—C5—C6—C70.9 (15)
O3—Hg1—O1—C8178.8 (6)C5—C6—C7—C8−1.8 (15)
Cl1i—Hg1—O1—C8−8.3 (7)C6—C7—C8—O1−178.0 (8)
Cl1—Hg1—O1—C1065.7 (7)C6—C7—C8—C92.2 (14)
Cl2—Hg1—O1—C10−93.8 (7)C10—O1—C8—C713.2 (13)
N1—Hg1—O1—C10166.6 (8)Hg1—O1—C8—C7−167.4 (7)
O3—Hg1—O1—C10−1.9 (7)C10—O1—C8—C9−167.0 (8)
Cl1i—Hg1—O1—C10171.0 (6)Hg1—O1—C8—C912.4 (9)
Cl1—Hg1—O3—C11−110.2 (7)C1—N1—C9—C8178.2 (8)
Cl2—Hg1—O3—C1195.7 (7)Hg1—N1—C9—C8−11.9 (11)
N1—Hg1—O3—C11−6.1 (8)C1—N1—C9—C4−2.1 (11)
O1—Hg1—O3—C115.3 (6)Hg1—N1—C9—C4167.8 (6)
Cl1i—Hg1—O3—C11−167.7 (5)C7—C8—C9—N1177.9 (8)
Cl1—Hg1—N1—C1−78.3 (6)O1—C8—C9—N1−1.9 (11)
Cl2—Hg1—N1—C195.7 (6)C7—C8—C9—C4−1.8 (12)
O1—Hg1—N1—C1−177.3 (7)O1—C8—C9—C4178.4 (7)
O3—Hg1—N1—C1−166.5 (5)C3—C4—C9—N12.7 (12)
Cl1i—Hg1—N1—C14.8 (6)C5—C4—C9—N1−178.7 (8)
Cl1—Hg1—N1—C9111.5 (6)C3—C4—C9—C8−177.6 (8)
Cl2—Hg1—N1—C9−74.5 (6)C5—C4—C9—C81.0 (11)
O1—Hg1—N1—C912.5 (6)C8—O1—C10—C11178.6 (7)
O3—Hg1—N1—C923.4 (7)Hg1—O1—C10—C11−0.7 (11)
Cl1i—Hg1—N1—C9−165.4 (6)Hg1—O3—C11—O2173.0 (6)
C9—N1—C1—C2−1.0 (12)Hg1—O3—C11—C10−8.8 (12)
Hg1—N1—C1—C2−171.7 (7)C12—O2—C11—O3−1.6 (12)
N1—C1—C2—C33.6 (14)C12—O2—C11—C10179.9 (7)
C1—C2—C3—C4−2.9 (13)O1—C10—C11—O36.4 (13)
C2—C3—C4—C9−0.1 (12)O1—C10—C11—O2−175.1 (7)
C2—C3—C4—C5−178.7 (9)
Table 1

Selected bond lengths (Å)

Hg1—Cl12.340 (2)
Hg1—Cl22.350 (2)
Hg1—N12.463 (6)
Hg1—O12.746 (6)
Hg1—O32.876 (6)
Hg1—Cl1i 3.204 (2)

Symmetry code: (i) .

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