Literature DB >> 22807755

A second monoclinic polymorph of di-μ-chlorido-bis-(chlorido{2-[(4-ethyl-phen-yl)imino-meth-yl]pyridine-κ²N,N'}copper(II)).

Mehdi Khalaj1, Saeed Dehghanpour, Ali Mahmoudi, Arash Khalaj, Alan J Lough.   

Abstract

The title compound, [Cu₂Cl₄(C₁₄H₁₄N₂)₂], is a new polymorph of a previously reported compound [Dehghanpour et al. (2011 ▶). Acta Cryst. E67, m1296]. The current polymorph was obtained from an acetonitrile solution of the title compound. Like the first polymorph, it is monoclinic (space group P2₁/c). The unique Cu(II) ion in the title centrosymmetric dinuclear complex is in a distorted trigonal-bipyramidal coordination environment formed by the bis--chelating N-heterocyclic ligand, two bridging Cl ligands and one terminal Cl ligand. In the crystal, weak C-H⋯Cl hydrogen bonds are observed in addition to π-π stacking inter-actions, with a centroid-centroid distance of 3.6597 (18) Å.

Entities:  

Year:  2012        PMID: 22807755      PMCID: PMC3393187          DOI: 10.1107/S1600536812026347

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of the ligand, see: Dehghanpour et al. (2009 ▶). For background to diimine complexes and related structures, see: Dehghanpour et al. (2011 ▶); Salehzadeh et al. (2011 ▶). For an index of trigonality as a general descriptor of five-coord­inate complexes, see: Addison et al. (1984 ▶).

Experimental

Crystal data

[Cu2Cl4(C14H14N2)2] M = 689.42 Monoclinic, a = 7.8480 (4) Å b = 13.7160 (6) Å c = 14.4601 (7) Å β = 113.924 (3)° V = 1422.80 (12) Å3 Z = 2 Mo Kα radiation μ = 1.90 mm−1 T = 150 K 0.30 × 0.25 × 0.20 mm

Data collection

Nonius KappaCCD diffractometer Absorption correction: multi-scan (SORTAV; Blessing, 1995 ▶) T min = 0.581, T max = 0.689 7862 measured reflections 3249 independent reflections 2399 reflections with I > 2σ(I) R int = 0.045

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.102 S = 1.05 3249 reflections 173 parameters H-atom parameters constrained Δρmax = 0.76 e Å−3 Δρmin = −0.70 e Å−3 Data collection: COLLECT (Nonius, 2002 ▶); cell refinement: DENZO-SMN (Otwinowski & Minor, 1997 ▶); data reduction: DENZO-SMN; program(s) used to solve structure: SIR92 (Altomare et al., 1994 ▶); program(s) used to refine structure: SHELXTL (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶) and Mercury (Macrae et al., 2006) ▶; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812026347/fb2253sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812026347/fb2253Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu2Cl4(C14H14N2)2]F(000) = 700
Mr = 689.42Dx = 1.609 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 4440 reflections
a = 7.8480 (4) Åθ = 2.6–27.5°
b = 13.7160 (6) ŵ = 1.90 mm1
c = 14.4601 (7) ÅT = 150 K
β = 113.924 (3)°Block, orange
V = 1422.80 (12) Å30.30 × 0.25 × 0.20 mm
Z = 2
Nonius KappaCCD diffractometer3249 independent reflections
Radiation source: fine-focus sealed tube2399 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.045
Detector resolution: 9 pixels mm-1θmax = 27.5°, θmin = 2.8°
φ scans and ω scans with κ offsetsh = −10→10
Absorption correction: multi-scan (SORTAV; Blessing, 1995)k = −17→15
Tmin = 0.581, Tmax = 0.689l = −12→18
7862 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040Hydrogen site location: difference Fourier map
wR(F2) = 0.102H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0441P)2 + 0.8729P] where P = (Fo2 + 2Fc2)/3
3249 reflections(Δ/σ)max = 0.001
173 parametersΔρmax = 0.76 e Å3
0 restraintsΔρmin = −0.70 e Å3
55 constraints
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.50129 (5)0.45502 (2)0.61249 (3)0.02458 (13)
Cl10.60970 (11)0.59376 (5)0.56397 (5)0.0301 (2)
Cl20.33826 (11)0.53968 (5)0.68632 (6)0.03089 (19)
N10.7670 (3)0.40393 (17)0.70183 (18)0.0239 (5)
N20.4320 (3)0.32164 (16)0.64881 (17)0.0227 (5)
C10.9333 (4)0.4446 (2)0.7264 (2)0.0290 (7)
H1A0.94030.50660.69870.035*
C21.0974 (4)0.4000 (2)0.7912 (2)0.0329 (7)
H2A1.21390.43150.80770.040*
C31.0897 (4)0.3100 (2)0.8311 (2)0.0337 (7)
H3A1.20030.27840.87570.040*
C40.9176 (4)0.2662 (2)0.8049 (2)0.0342 (7)
H4A0.90790.20340.83010.041*
C50.7598 (4)0.3157 (2)0.7415 (2)0.0265 (6)
C60.5738 (4)0.2752 (2)0.7108 (2)0.0287 (7)
H6A0.55730.21400.73680.034*
C70.2496 (4)0.2788 (2)0.6146 (2)0.0262 (6)
C80.2256 (5)0.1806 (2)0.6308 (3)0.0442 (9)
H8A0.33100.13980.66340.053*
C90.0487 (5)0.1429 (3)0.5996 (3)0.0530 (11)
H9A0.03400.07580.61110.064*
C10−0.1092 (4)0.1998 (2)0.5515 (3)0.0368 (8)
C11−0.0829 (4)0.2962 (2)0.5328 (2)0.0302 (7)
H11A−0.18830.33640.49830.036*
C120.0946 (4)0.3355 (2)0.5634 (2)0.0279 (7)
H12A0.10940.40180.54910.033*
C13−0.3033 (5)0.1564 (3)0.5204 (3)0.0522 (10)
H13A−0.32050.13710.58210.063*
H13B−0.39710.20720.48540.063*
C14−0.3384 (6)0.0684 (3)0.4514 (3)0.0581 (11)
H14A−0.46750.04650.43070.087*
H14B−0.25320.01560.48760.087*
H14C−0.31700.08620.39130.087*
U11U22U33U12U13U23
Cu10.0276 (2)0.01543 (19)0.0310 (2)−0.00135 (14)0.01221 (17)0.00164 (14)
Cl10.0399 (4)0.0189 (4)0.0290 (4)−0.0081 (3)0.0116 (3)0.0005 (3)
Cl20.0375 (4)0.0188 (4)0.0416 (4)−0.0010 (3)0.0214 (4)−0.0044 (3)
N10.0276 (13)0.0190 (12)0.0258 (13)−0.0006 (11)0.0116 (11)0.0015 (10)
N20.0259 (13)0.0171 (12)0.0258 (13)−0.0004 (10)0.0113 (10)−0.0018 (10)
C10.0290 (16)0.0277 (16)0.0307 (17)−0.0014 (13)0.0127 (14)0.0044 (13)
C20.0263 (16)0.0390 (18)0.0329 (18)−0.0026 (15)0.0114 (14)0.0017 (14)
C30.0287 (17)0.0326 (17)0.0346 (18)0.0042 (14)0.0074 (14)0.0065 (14)
C40.0360 (18)0.0232 (15)0.0378 (18)0.0020 (15)0.0094 (15)0.0050 (14)
C50.0298 (16)0.0205 (14)0.0299 (16)0.0022 (13)0.0127 (13)0.0014 (12)
C60.0322 (17)0.0186 (14)0.0345 (17)0.0005 (13)0.0127 (14)0.0043 (13)
C70.0268 (15)0.0233 (15)0.0298 (16)−0.0013 (13)0.0126 (13)0.0006 (12)
C80.0275 (18)0.0250 (17)0.069 (3)0.0008 (15)0.0081 (17)0.0166 (17)
C90.0330 (19)0.0299 (19)0.082 (3)−0.0036 (16)0.009 (2)0.0176 (19)
C100.0278 (17)0.0346 (19)0.047 (2)−0.0026 (15)0.0136 (15)0.0002 (15)
C110.0265 (16)0.0283 (16)0.0328 (17)0.0048 (13)0.0090 (14)−0.0013 (13)
C120.0300 (16)0.0193 (14)0.0317 (17)0.0016 (13)0.0097 (13)0.0000 (12)
C130.033 (2)0.042 (2)0.076 (3)−0.0026 (17)0.0158 (19)0.004 (2)
C140.048 (2)0.072 (3)0.048 (2)−0.023 (2)0.0130 (19)−0.003 (2)
Cu1—N22.037 (2)C6—H6A0.9500
Cu1—N12.079 (2)C7—C121.379 (4)
Cu1—Cl22.2876 (8)C7—C81.393 (4)
Cu1—Cl12.3067 (8)C8—C91.375 (5)
Cu1—Cl1i2.4321 (8)C8—H8A0.9500
Cl1—Cu1i2.4321 (8)C9—C101.389 (5)
N1—C11.328 (4)C9—H9A0.9500
N1—C51.350 (4)C10—C111.382 (4)
N2—C61.280 (4)C10—C131.523 (5)
N2—C71.437 (4)C11—C121.388 (4)
C1—C21.390 (4)C11—H11A0.9500
C1—H1A0.9500C12—H12A0.9500
C2—C31.374 (4)C13—C141.520 (6)
C2—H2A0.9500C13—H13A0.9900
C3—C41.384 (4)C13—H13B0.9900
C3—H3A0.9500C14—H14A0.9800
C4—C51.383 (4)C14—H14B0.9800
C4—H4A0.9500C14—H14C0.9800
C5—C61.453 (4)
N2—Cu1—N180.94 (9)N2—C6—H6A119.9
N2—Cu1—Cl294.43 (7)C5—C6—H6A119.9
N1—Cu1—Cl2119.40 (7)C12—C7—C8119.1 (3)
N2—Cu1—Cl1171.55 (7)C12—C7—N2119.5 (3)
N1—Cu1—Cl193.80 (7)C8—C7—N2121.4 (3)
Cl2—Cu1—Cl193.91 (3)C9—C8—C7119.7 (3)
N2—Cu1—Cl1i90.23 (7)C9—C8—H8A120.1
N1—Cu1—Cl1i113.66 (7)C7—C8—H8A120.1
Cl2—Cu1—Cl1i126.81 (3)C8—C9—C10122.0 (3)
Cl1—Cu1—Cl1i85.82 (3)C8—C9—H9A119.0
Cu1—Cl1—Cu1i94.18 (3)C10—C9—H9A119.0
C1—N1—C5118.0 (3)C11—C10—C9117.5 (3)
C1—N1—Cu1130.8 (2)C11—C10—C13121.8 (3)
C5—N1—Cu1111.22 (19)C9—C10—C13120.7 (3)
C6—N2—C7119.9 (2)C10—C11—C12121.3 (3)
C6—N2—Cu1112.36 (19)C10—C11—H11A119.3
C7—N2—Cu1127.69 (18)C12—C11—H11A119.3
N1—C1—C2122.4 (3)C7—C12—C11120.3 (3)
N1—C1—H1A118.8C7—C12—H12A119.9
C2—C1—H1A118.8C11—C12—H12A119.9
C3—C2—C1119.5 (3)C14—C13—C10113.4 (3)
C3—C2—H2A120.3C14—C13—H13A108.9
C1—C2—H2A120.3C10—C13—H13A108.9
C2—C3—C4118.6 (3)C14—C13—H13B108.9
C2—C3—H3A120.7C10—C13—H13B108.9
C4—C3—H3A120.7H13A—C13—H13B107.7
C5—C4—C3118.7 (3)C13—C14—H14A109.5
C5—C4—H4A120.7C13—C14—H14B109.5
C3—C4—H4A120.7H14A—C14—H14B109.5
N1—C5—C4122.8 (3)C13—C14—H14C109.5
N1—C5—C6115.0 (3)H14A—C14—H14C109.5
C4—C5—C6122.2 (3)H14B—C14—H14C109.5
N2—C6—C5120.3 (3)
N2—Cu1—Cl1—Cu1i62.3 (5)Cu1—N1—C5—C4−179.1 (2)
N1—Cu1—Cl1—Cu1i113.48 (7)C1—N1—C5—C6−179.5 (3)
Cl2—Cu1—Cl1—Cu1i−126.67 (3)Cu1—N1—C5—C62.2 (3)
Cl1i—Cu1—Cl1—Cu1i0.0C3—C4—C5—N11.7 (5)
N2—Cu1—N1—C1178.7 (3)C3—C4—C5—C6−179.7 (3)
Cl2—Cu1—N1—C1−91.4 (3)C7—N2—C6—C5176.6 (3)
Cl1—Cu1—N1—C15.3 (3)Cu1—N2—C6—C5−4.4 (4)
Cl1i—Cu1—N1—C192.4 (3)N1—C5—C6—N21.5 (4)
N2—Cu1—N1—C5−3.39 (19)C4—C5—C6—N2−177.3 (3)
Cl2—Cu1—N1—C586.6 (2)C6—N2—C7—C12168.0 (3)
Cl1—Cu1—N1—C5−176.73 (19)Cu1—N2—C7—C12−10.8 (4)
Cl1i—Cu1—N1—C5−89.63 (19)C6—N2—C7—C8−12.8 (4)
N1—Cu1—N2—C64.2 (2)Cu1—N2—C7—C8168.4 (3)
Cl2—Cu1—N2—C6−114.9 (2)C12—C7—C8—C9−2.7 (5)
Cl1—Cu1—N2—C656.1 (6)N2—C7—C8—C9178.1 (3)
Cl1i—Cu1—N2—C6118.1 (2)C7—C8—C9—C100.1 (6)
N1—Cu1—N2—C7−176.9 (2)C8—C9—C10—C112.1 (6)
Cl2—Cu1—N2—C764.0 (2)C8—C9—C10—C13−178.3 (4)
Cl1—Cu1—N2—C7−125.0 (4)C9—C10—C11—C12−1.8 (5)
Cl1i—Cu1—N2—C7−63.0 (2)C13—C10—C11—C12178.6 (3)
C5—N1—C1—C2−0.4 (4)C8—C7—C12—C112.9 (5)
Cu1—N1—C1—C2177.5 (2)N2—C7—C12—C11−177.8 (3)
N1—C1—C2—C30.6 (5)C10—C11—C12—C7−0.7 (5)
C1—C2—C3—C40.3 (5)C11—C10—C13—C14123.0 (4)
C2—C3—C4—C5−1.4 (5)C9—C10—C13—C14−56.6 (5)
C1—N1—C5—C4−0.8 (4)
D—H···AD—HH···AD···AD—H···A
C1—H1A···Cl10.952.803.364 (3)119
C2—H2A···Cl2ii0.952.763.445 (3)130
C6—H6A···Cl2iii0.952.623.506 (3)155
C12—H12A···Cl20.952.803.450 (3)126
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C1—H1A⋯Cl10.952.803.364 (3)119
C2—H2A⋯Cl2i 0.952.763.445 (3)130
C6—H6A⋯Cl2ii 0.952.623.506 (3)155
C12—H12A⋯Cl20.952.803.450 (3)126

Symmetry codes: (i) ; (ii) .

  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  An empirical correction for absorption anisotropy.

Authors:  R H Blessing
Journal:  Acta Crystallogr A       Date:  1995-01-01       Impact factor: 2.290

3.  Di-μ-chlorido-bis-{chlorido[4-nitro-N-(pyridin-2-yl-methyl-idene-κN)aniline-κN]mercury(II)}.

Authors:  Sadegh Salehzadeh; Saeed Dehghanpour; Mehdi Khalaj; Mohammad Rahimishakiba
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-02-12

4.  Di-μ-chlorido-bis-(chlorido{2-[(4-ethyl-phen-yl)imino-meth-yl]pyridine-κN,N'}copper(II)).

Authors:  Saeed Dehghanpour; Ali Mahmoudi; Mehdi Khalaj; Somayeh Abbasi; Fresia Mojahed
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-08-27

5.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  5 in total

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