Literature DB >> 22807742

Poly[[hexa-μ-aqua-diaqua-bis-(μ₄-dihydrogen benzene-1,2,4,5-tetra-carboxyl-ato)magnesiumdisodium] dihydrate].

Dan Zhao1, Peng Liang, Yan-Feng Li, Sen Qiu, Jun-Ran Ren.   

Abstract

The asymmetric unit of the title compound, {[MgNa₂(C₁₀H₄O₈)₂(H₂O)₈]·2H₂O}(n), contains one octa-hedrally coordin-ated Mg(II) atom (site symmetry 2/m), one octahedrally coordinated Na(I) atom (site symmetry 2) and one half of the dihydrogen benzene-1,2,4,5-tetra-carboxyl-ate (btec) ligand, the second half of the ligand being generated by a twofold rotation axis. The basic framework of the title compound features infinite (-Na-Na-Mg-)(n) chains along [10-1] with the metal cations bridged by the coordinating water molecules. The chains are isolated from each other by μ₄-bridging btec ligands, which form inter-molecular O-H⋯O hydrogen bonds to uncoordinated water mol-ecules and the coordinated water mol-ecules of a neighbouring chain. In each btec ligand, there are also intramolecular O-H⋯O hydrogen bonds.

Entities:  

Year:  2012        PMID: 22807742      PMCID: PMC3393174          DOI: 10.1107/S1600536812024634

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For structures based on the H4btec ligand, see: Gong & Zhang (2011 ▶); Liu et al. (2009 ▶, 2010 ▶); Zhang et al. (2007 ▶).

Experimental

Crystal data

[MgNa2(C10H4O8)2(H2O)8]·2H2O M = 754.71 Monoclinic, a = 7.3335 (13) Å b = 20.155 (4) Å c = 10.4450 (18) Å β = 103.325 (3)° V = 1502.3 (5) Å3 Z = 2 Mo Kα radiation μ = 0.20 mm−1 T = 296 K 0.20 × 0.05 × 0.05 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.961, T max = 0.990 4088 measured reflections 1440 independent reflections 1272 reflections with I > 2σ(I) R int = 0.022

Refinement

R[F 2 > 2σ(F 2)] = 0.030 wR(F 2) = 0.089 S = 1.08 1440 reflections 122 parameters H-atom parameters constrained Δρmax = 0.23 e Å−3 Δρmin = −0.21 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812024634/ez2296sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812024634/ez2296Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[MgNa2(C10H4O8)2(H2O)8]·2H2OF(000) = 780
Mr = 754.71Dx = 1.668 Mg m3
Monoclinic, C2/mMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2yCell parameters from 2031 reflections
a = 7.3335 (13) Åθ = 2.9–27.8°
b = 20.155 (4) ŵ = 0.20 mm1
c = 10.4450 (18) ÅT = 296 K
β = 103.325 (3)°Prism, colourless
V = 1502.3 (5) Å30.20 × 0.05 × 0.05 mm
Z = 2
Bruker APEXII CCD area-detector diffractometer1440 independent reflections
Radiation source: fine-focus sealed tube1272 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.022
Detector resolution: 83.33 pixels mm-1θmax = 25.5°, θmin = 2.0°
ω scansh = −8→8
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)k = −24→22
Tmin = 0.961, Tmax = 0.990l = −11→12
4088 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.030H-atom parameters constrained
wR(F2) = 0.089w = 1/[σ2(Fo2) + (0.0445P)2 + 0.7471P] where P = (Fo2 + 2Fc2)/3
S = 1.08(Δ/σ)max < 0.001
1440 reflectionsΔρmax = 0.23 e Å3
122 parametersΔρmin = −0.21 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0033 (7)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Mg10.00000.00000.00000.0220 (2)
Na10.31699 (13)0.00000.32732 (8)0.0356 (3)
O10.30603 (18)0.11183 (5)0.30357 (11)0.0464 (3)
C10.50000.18685 (9)0.50000.0233 (4)
H10.50000.14070.50000.028*
O20.20225 (19)0.31210 (6)0.17351 (10)0.0487 (4)
C20.50000.32051 (9)0.50000.0221 (4)
H20.50000.36670.50000.027*
O30.20002 (18)0.19389 (6)0.17286 (10)0.0481 (4)
H30.21320.24560.16070.072*
C30.39709 (18)0.28869 (6)0.38857 (12)0.0211 (3)
O40.31030 (15)0.39579 (5)0.30165 (10)0.0339 (3)
C40.39692 (18)0.21864 (6)0.38884 (12)0.0214 (3)
O50.28991 (19)0.00000.08188 (14)0.0288 (3)
H50.35300.03400.05640.043*
C50.2960 (2)0.17086 (7)0.28270 (14)0.0283 (3)
O60.3317 (3)0.00000.56419 (17)0.0483 (5)
H60.2884−0.03680.59630.073*
C60.29702 (19)0.33570 (7)0.28103 (13)0.0258 (3)
O70.50000.09605 (7)0.00000.0311 (3)
H70.43670.1223−0.05900.047*
O80.00000.10073 (7)0.00000.0322 (4)
H8−0.06810.1262−0.05600.048*
O90.0320 (2)0.0000−0.19461 (14)0.0314 (4)
H90.08970.0325−0.21910.047*
U11U22U33U12U13U23
Mg10.0265 (5)0.0161 (4)0.0222 (5)0.0000.0032 (4)0.000
Na10.0521 (6)0.0188 (4)0.0328 (5)0.0000.0034 (4)0.000
O10.0678 (8)0.0176 (6)0.0428 (7)−0.0038 (5)−0.0098 (6)−0.0044 (5)
C10.0259 (10)0.0152 (9)0.0275 (10)0.0000.0037 (8)0.000
O20.0697 (8)0.0256 (6)0.0343 (6)0.0023 (5)−0.0222 (6)0.0038 (5)
C20.0262 (9)0.0136 (9)0.0258 (10)0.0000.0046 (8)0.000
O30.0683 (8)0.0244 (6)0.0350 (6)−0.0028 (5)−0.0224 (6)−0.0032 (5)
C30.0216 (7)0.0186 (7)0.0225 (7)0.0007 (5)0.0038 (5)0.0014 (5)
O40.0478 (7)0.0177 (5)0.0335 (6)0.0032 (4)0.0040 (5)0.0050 (4)
C40.0215 (6)0.0185 (7)0.0231 (7)−0.0010 (5)0.0031 (5)−0.0012 (5)
O50.0280 (7)0.0221 (7)0.0363 (8)0.0000.0070 (6)0.000
C50.0318 (8)0.0214 (7)0.0282 (7)−0.0012 (6)0.0000 (6)−0.0036 (6)
O60.0713 (12)0.0291 (8)0.0533 (11)0.0000.0321 (9)0.000
C60.0282 (7)0.0211 (7)0.0263 (7)0.0011 (5)0.0028 (6)0.0028 (6)
O70.0357 (8)0.0214 (7)0.0304 (8)0.000−0.0046 (6)0.000
O80.0419 (9)0.0162 (7)0.0299 (8)0.000−0.0094 (6)0.000
O90.0469 (9)0.0185 (7)0.0324 (8)0.0000.0166 (7)0.000
Mg1—O82.0301 (14)O2—C61.2691 (17)
Mg1—O8i2.0302 (14)O2—H31.3505
Mg1—O92.0992 (14)C2—C31.3895 (15)
Mg1—O9i2.0992 (14)C2—C3iv1.3895 (15)
Mg1—O5i2.1008 (14)C2—H20.9300
Mg1—O52.1008 (14)O3—C51.2865 (17)
Mg1—Na1i3.6645 (10)O3—H31.0579
Mg1—Na13.6646 (10)C3—C41.4119 (18)
Na1—O12.2669 (12)C3—C61.5225 (18)
Na1—O1ii2.2669 (12)O4—C61.2301 (17)
Na1—O62.4515 (19)C4—C51.5250 (18)
Na1—O52.5252 (16)O5—H50.9007
Na1—O6iii2.564 (2)O6—Na1iii2.564 (2)
Na1—O9i2.6146 (18)O6—H60.9011
Na1—Na1iii3.9692 (17)O7—H70.8628
O1—C51.2088 (18)O8—H80.8481
C1—C41.3876 (15)O9—Na1i2.6146 (17)
C1—C4iv1.3876 (15)O9—H90.8510
C1—H10.9300
O8—Mg1—O8i180.0O1ii—Na1—Mg184.21 (4)
O8—Mg1—O990.0O6—Na1—Mg1144.34 (6)
O8i—Mg1—O990.0O5—Na1—Mg133.73 (3)
O8—Mg1—O9i90.0O6iii—Na1—Mg1140.26 (5)
O8i—Mg1—O9i90.0O9i—Na1—Mg134.15 (3)
O9—Mg1—O9i180.00 (8)O1—Na1—Na1iii95.68 (4)
O8—Mg1—O5i90.0O1ii—Na1—Na1iii95.68 (4)
O8i—Mg1—O5i90.0O6—Na1—Na1iii38.69 (5)
O9—Mg1—O5i86.23 (6)O5—Na1—Na1iii143.24 (5)
O9i—Mg1—O5i93.77 (6)O6iii—Na1—Na1iii36.70 (4)
O8—Mg1—O590.0O9i—Na1—Na1iii148.88 (5)
O8i—Mg1—O590.0Mg1—Na1—Na1iii176.97 (4)
O9—Mg1—O593.77 (6)C5—O1—Na1175.97 (11)
O9i—Mg1—O586.23 (6)C4—C1—C4iv125.01 (18)
O5i—Mg1—O5180.0C4—C1—H1117.5
O8—Mg1—Na1i90.0C4iv—C1—H1117.5
O8i—Mg1—Na1i90.0C6—O2—H3115.2
O9—Mg1—Na1i44.36 (4)C3—C2—C3iv125.01 (17)
O9i—Mg1—Na1i135.64 (4)C3—C2—H2117.5
O5i—Mg1—Na1i41.87 (4)C3iv—C2—H2117.5
O5—Mg1—Na1i138.13 (4)C5—O3—H3114.6
O8—Mg1—Na190.0C2—C3—C4117.42 (12)
O8i—Mg1—Na190.0C2—C3—C6114.02 (12)
O9—Mg1—Na1135.64 (4)C4—C3—C6128.56 (11)
O9i—Mg1—Na144.36 (4)C1—C4—C3117.57 (12)
O5i—Mg1—Na1138.13 (4)C1—C4—C5113.34 (13)
O5—Mg1—Na141.87 (4)C3—C4—C5129.09 (11)
Na1i—Mg1—Na1180.0Mg1—O5—Na1104.40 (6)
O1—Na1—O1ii167.72 (7)Mg1—O5—H5114.8
O1—Na1—O695.89 (4)Na1—O5—H5112.0
O1ii—Na1—O695.89 (4)O1—C5—O3120.93 (13)
O1—Na1—O584.05 (4)O1—C5—C4119.43 (13)
O1ii—Na1—O584.05 (4)O3—C5—C4119.64 (12)
O6—Na1—O5178.07 (7)Na1—O6—Na1iii104.61 (6)
O1—Na1—O6iii93.16 (4)Na1—O6—H6116.0
O1ii—Na1—O6iii93.16 (4)Na1iii—O6—H6103.9
O6—Na1—O6iii75.39 (6)O4—C6—O2121.94 (13)
O5—Na1—O6iii106.54 (6)O4—C6—C3118.58 (12)
O1—Na1—O9i86.35 (4)O2—C6—C3119.48 (12)
O1ii—Na1—O9i86.35 (4)Mg1—O8—H8127.2
O6—Na1—O9i110.19 (6)Mg1—O9—Na1i101.49 (6)
O5—Na1—O9i67.88 (5)Mg1—O9—H9117.8
O6iii—Na1—O9i174.41 (6)Na1i—O9—H9109.5
O1—Na1—Mg184.21 (4)
D—H···AD—HH···AD···AD—H···A
O3—H3···O21.061.352.3827 (17)163
O5—H5···O70.901.832.7313 (14)173
O6—H6···O4v0.901.972.8519 (15)167
O7—H7···O2vi0.861.912.7699 (14)173
O8—H8···O3vii0.851.942.7779 (14)172
O9—H9···O4vi0.851.912.7559 (14)171
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O3—H3⋯O21.061.352.3827 (17)163
O5—H5⋯O70.901.832.7313 (14)173
O6—H6⋯O4i 0.901.972.8519 (15)167
O7—H7⋯O2ii 0.861.912.7699 (14)173
O8—H8⋯O3iii 0.851.942.7779 (14)172
O9—H9⋯O4ii 0.851.912.7559 (14)171

Symmetry codes: (i) ; (ii) ; (iii) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Poly[μ-aqua-aqua-(μ-benzene-1,2,4,5-tetra-carboxyl-ato)gadolinate(III)potassium(I)].

Authors:  Xue Yun Gong; Lei Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-05-11
  2 in total

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