Literature DB >> 22806019

Cloning, purification and characterization of an alkali-stable endoxylanase from thermophilic Geobacillus sp. 71.

Sabriye Canakcı1, Zeliha Cevher, Kadriye Inan, Muslum Tokgoz, Fatmagul Bahar, Murat Kacagan, Fulya Ay Sal, Ali Osman Belduz.   

Abstract

The gene encoding a xylanase from Geobacillus sp. 71 was isolated, cloned, and sequenced. Purification of the Geobacillus sp 7.1 xylanase, XyzGeo71, following overexpression in E. coli produced an enzyme of 47 kDa with an optimum temperature of 75°C. The optimum pH of the enzyme is 8.0, but it is active over a broad pH range. This protein showed the highest sequence identity (93%) with the xylanase from Geobacillus thermodenitrificans NG80-2. XyzGeo71 contains a catalytic domain that belongs to the glycoside hydrolase family 10 (GH10). XyzGeo71 exhibited good pH stability, remaining stable after treatment with buffers ranging from pH 7.0 to 11.0 for 6 h. Its activity was partially inhibited by Al(3+) and Cu(2+) but strongly inhibited by Hg(2+). The enzyme follows Michaelis-Menten kinetics, with K(m) and V(max) values of 0.425 mg xylan/ml and 500 μmol/min.mg, respectively. The enzyme was free from cellulase activity and degraded xylan in an endo fashion. The action of the enzyme on oat spelt xylan produced xylobiose and xylotetrose.

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Year:  2012        PMID: 22806019     DOI: 10.1007/s11274-011-1000-3

Source DB:  PubMed          Journal:  World J Microbiol Biotechnol        ISSN: 0959-3993            Impact factor:   3.312


  26 in total

Review 1.  Biotechnology of microbial xylanases: enzymology, molecular biology, and application.

Authors:  S Subramaniyan; P Prema
Journal:  Crit Rev Biotechnol       Date:  2002       Impact factor: 8.429

2.  Purification and characterization of a novel cellulase-free xylanase from Acrophialophora nainiana.

Authors:  Orlando Aparecido Vieira Cardoso; Edivaldo Ximenes Ferreira Filho
Journal:  FEMS Microbiol Lett       Date:  2003-06-27       Impact factor: 2.742

3.  A highly thermostable alkaline cellulase-free xylanase from thermoalkalophilic Bacillus sp. JB 99 suitable for paper and pulp industry: purification and characterization.

Authors:  Dengeti Shrinivas; Gunashekaran Savitha; Kumar Raviranjan; Gajanan Ramchandra Naik
Journal:  Appl Biochem Biotechnol       Date:  2010-05-14       Impact factor: 2.926

4.  Cloning, expression, and characterization of protease-resistant xylanase from Streptomyces fradiae var. k11.

Authors:  Ning Li; Peilong Yang; Yaru Wang; Huiying Luo; Kun Meng; Ningfeng Wu; Yunliu Fan; Bin Yao
Journal:  J Microbiol Biotechnol       Date:  2008-03       Impact factor: 2.351

5.  Purification and properties of two thermostable alkaline xylanases from an alkaliphilic bacillus sp

Authors: 
Journal:  Appl Environ Microbiol       Date:  1998-09       Impact factor: 4.792

6.  Purification and characterization of thermoalkalophilic xylanase isolated from the Enterobacter sp. MTCC 5112.

Authors:  Rakhee Khandeparkar; Narayan B Bhosle
Journal:  Res Microbiol       Date:  2005-12-27       Impact factor: 3.992

7.  Crystal structure of Streptomyces olivaceoviridis E-86 beta-xylanase containing xylan-binding domain.

Authors:  Z Fujimoto; A Kuno; S Kaneko; S Yoshida; H Kobayashi; I Kusakabe; H Mizuno
Journal:  J Mol Biol       Date:  2000-07-14       Impact factor: 5.469

8.  Characterization of a recombinant thermostable xylanase from deep-sea thermophilic Geobacillus sp. MT-1 in East Pacific.

Authors:  Suijie Wu; Bin Liu; Xiaobo Zhang
Journal:  Appl Microbiol Biotechnol       Date:  2006-04-11       Impact factor: 4.813

9.  Purification and characterization of a thermostable xylanase from Bacillus stearothermophilus T-6.

Authors:  A Khasin; I Alchanati; Y Shoham
Journal:  Appl Environ Microbiol       Date:  1993-06       Impact factor: 4.792

10.  Characterization and sequence of a Thermomonospora fusca xylanase.

Authors:  D Irwin; E D Jung; D B Wilson
Journal:  Appl Environ Microbiol       Date:  1994-03       Impact factor: 4.792

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  8 in total

1.  Characteristics of thermostable endoxylanase and β-xylosidase of the extremely thermophilic bacterium Geobacillus thermodenitrificans TSAA1 and its applicability in generating xylooligosaccharides and xylose from agro-residues.

Authors:  Ashima Anand; Vikash Kumar; T Satyanarayana
Journal:  Extremophiles       Date:  2013-03-16       Impact factor: 2.395

2.  Characterization and constitutive expression of an acidic mesophilic endo-1,4-β-D-xylanohydrolase with high thermotolerance and catalytic efficiency in Pichia pastoris.

Authors:  Ning Guo; Jia Zheng; Jian Tian; Lishuang Wu; Hongbo Zhou
Journal:  World J Microbiol Biotechnol       Date:  2013-05-14       Impact factor: 3.312

3.  Complete genome sequence, metabolic model construction and phenotypic characterization of Geobacillus LC300, an extremely thermophilic, fast growing, xylose-utilizing bacterium.

Authors:  Lauren T Cordova; Christopher P Long; Keerthi P Venkataramanan; Maciek R Antoniewicz
Journal:  Metab Eng       Date:  2015-09-21       Impact factor: 9.783

4.  Properties of an alkali-thermo stable xylanase from Geobacillus thermodenitrificans A333 and applicability in xylooligosaccharides generation.

Authors:  Loredana Marcolongo; Francesco La Cara; Alessandra Morana; Anna Di Salle; Giovanni Del Monaco; Susana M Paixão; Luis Alves; Elena Ionata
Journal:  World J Microbiol Biotechnol       Date:  2015-02-17       Impact factor: 3.312

5.  13C metabolic flux analysis of three divergent extremely thermophilic bacteria: Geobacillus sp. LC300, Thermus thermophilus HB8, and Rhodothermus marinus DSM 4252.

Authors:  Lauren T Cordova; Robert M Cipolla; Adti Swarup; Christopher P Long; Maciek R Antoniewicz
Journal:  Metab Eng       Date:  2017-10-14       Impact factor: 9.783

6.  Comparative analysis of the Geobacillus hemicellulose utilization locus reveals a highly variable target for improved hemicellulolysis.

Authors:  Pieter De Maayer; Phillip J Brumm; David A Mead; Don A Cowan
Journal:  BMC Genomics       Date:  2014-10-01       Impact factor: 3.969

7.  Hyperthermostable Thermotoga maritima xylanase XYN10B shows high activity at high temperatures in the presence of biomass-dissolving hydrophilic ionic liquids.

Authors:  Tianyi Yu; Sasikala Anbarasan; Yawei Wang; Kübra Telli; Aşkın Sevinç Aslan; Zhengding Su; Yin Zhou; Li Zhang; Piia Iivonen; Sami Havukainen; Tero Mentunen; Michael Hummel; Herbert Sixta; Baris Binay; Ossi Turunen; Hairong Xiong
Journal:  Extremophiles       Date:  2016-05-30       Impact factor: 2.395

8.  Biochemical characterization of the xylan hydrolysis profile of the extracellular endo-xylanase from Geobacillus thermodenitrificans T12.

Authors:  Martinus J A Daas; Patricia Murciano Martínez; Antonius H P van de Weijer; John van der Oost; Willem M de Vos; Mirjam A Kabel; Richard van Kranenburg
Journal:  BMC Biotechnol       Date:  2017-05-18       Impact factor: 2.563

  8 in total

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