Literature DB >> 22803195

A home for raw proteomics data.

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Abstract

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Year:  2012        PMID： 22803195     DOI： 10.1038/nmeth.2011

Source DB:  PubMed          Journal:  Nat Methods        ISSN： 1548-7091            Impact factor:   28.547


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  6 in total

Review 1.  Making proteomics data accessible and reusable: current state of proteomics databases and repositories.

Authors:  Yasset Perez-Riverol; Emanuele Alpi; Rui Wang; Henning Hermjakob; Juan Antonio Vizcaíno
Journal:  Proteomics       Date:  2015-03       Impact factor: 3.984

2.  Streaming visualisation of quantitative mass spectrometry data based on a novel raw signal decomposition method.

Authors:  Yan Zhang; Ranjeet Bhamber; Isabel Riba-Garcia; Hanqing Liao; Richard D Unwin; Andrew W Dowsey
Journal:  Proteomics       Date:  2015-03-09       Impact factor: 3.984

3.  Detection of viral proteins in human cells lines by xeno-proteomics: elimination of the last valid excuse for not testing every cellular proteome dataset for viral proteins.

Authors:  Alexey L Chernobrovkin; Roman A Zubarev
Journal:  PLoS One       Date:  2014-03-11       Impact factor: 3.240

4.  Reanalysis of phosphoproteomics data uncovers ADP-ribosylation sites.

Authors:  Ivan Matic; Ivan Ahel; Ronald T Hay
Journal:  Nat Methods       Date:  2012-07-30       Impact factor: 28.547

5.  The PRoteomics IDEntifications (PRIDE) database and associated tools: status in 2013.

Authors:  Juan Antonio Vizcaíno; Richard G Côté; Attila Csordas; José A Dianes; Antonio Fabregat; Joseph M Foster; Johannes Griss; Emanuele Alpi; Melih Birim; Javier Contell; Gavin O'Kelly; Andreas Schoenegger; David Ovelleiro; Yasset Pérez-Riverol; Florian Reisinger; Daniel Ríos; Rui Wang; Henning Hermjakob
Journal:  Nucleic Acids Res       Date:  2012-11-29       Impact factor: 16.971

6.  ProteomeXchange provides globally coordinated proteomics data submission and dissemination.

Authors:  Juan A Vizcaíno; Eric W Deutsch; Rui Wang; Attila Csordas; Florian Reisinger; Daniel Ríos; José A Dianes; Zhi Sun; Terry Farrah; Nuno Bandeira; Pierre-Alain Binz; Ioannis Xenarios; Martin Eisenacher; Gerhard Mayer; Laurent Gatto; Alex Campos; Robert J Chalkley; Hans-Joachim Kraus; Juan Pablo Albar; Salvador Martinez-Bartolomé; Rolf Apweiler; Gilbert S Omenn; Lennart Martens; Andrew R Jones; Henning Hermjakob
Journal:  Nat Biotechnol       Date:  2014-03       Impact factor: 54.908
  6 in total

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