| Literature DB >> 22802730 |
Jeffrey W Eaton1, Leigh F Johnson, Joshua A Salomon, Till Bärnighausen, Eran Bendavid, Anna Bershteyn, David E Bloom, Valentina Cambiano, Christophe Fraser, Jan A C Hontelez, Salal Humair, Daniel J Klein, Elisa F Long, Andrew N Phillips, Carel Pretorius, John Stover, Edward A Wenger, Brian G Williams, Timothy B Hallett.
Abstract
BACKGROUND: Many mathematical models have investigated the impact of expanding access to antiretroviral therapy (ART) on new HIV infections. Comparing results and conclusions across models is challenging because models have addressed slightly different questions and have reported different outcome metrics. This study compares the predictions of several mathematical models simulating the same ART intervention programmes to determine the extent to which models agree about the epidemiological impact of expanded ART. METHODS ANDEntities:
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Year: 2012 PMID: 22802730 PMCID: PMC3393664 DOI: 10.1371/journal.pmed.1001245
Source DB: PubMed Journal: PLoS Med ISSN: 1549-1277 Impact factor: 11.069
Description of mathematical models.
| Model Name [Key References] | Model Authors | Model Type | Model Calibration | Population Structure | Sexual Mixing | Variation in Infectiousness over Course of Infection | Increased Male-to-Female Transmission? | Reduced Transmission on ART | Behaviour Change in 2000s |
| BBH | Till Bärnighausen, David Bloom, Salal Humair | Deterministic (analytically derived) | Initialized to epidemic state in year 2009; HIV incidence generated using national data on HIV prevalence, mortality, ART, and sexual behaviour | Two-sex, age 15–49 y | Homogeneous heterosexual mixing | Early infection, latent infection, late-stage/AIDS | 3 times greater | 96.5% | Not applicable |
| Bendavid | Eran Bendavid | Microsimulation | Calibrated to current epidemic state in year 2012; select parameters estimated by scanning ranges from literature. | Two-sex, age-structured | Short- and long-term partners; heterogeneity in number of partners; decrease with age; short partners assortative by 5-y age group | Early infection, then according to VL (partner VL not tracked, randomly sampled from population) | No, but includes circumcision | 91% (mediated by VL) | Not applicable |
| CD4 HIV/ART (CD4 Model of HIV and ART) | John Stover, Carel Pretorius | Deterministic | Incidence curve imported from Spectrum model | Single-sex, age 15+ y | Sexual mixing not explicitly modelled; infection by multiplying fixed force of infection by current HIV prevalence | Early infection (×9.2), asymptomatic, symptomatic (×7.3) | Not applicable | 96% | Not applicable (incidence curve input from Spectrum) |
| Eaton | Jeffrey Eaton, Timothy Hallett, Geoffrey Garnett | Deterministic | Sex-specific age (15–49 y) HH prevalence (HSRC '02, '05, '08) and ANC prevalence '90–'08 estimated using Bayesian framework | Two-sex, age 15–49 y (sexually active) and age 50+ y (not sexually active) | Three sexual risk groups, with partially assortative mixing by risk group | Early infection (×38), CD4>350 (×0.61), 350>CD4>200, 200>CD4>100 (×3.75), CD4≤100 (×0.71) | No | 92% | Reduction in unprotected sexual contacts over ∼1999 to 2011 (timing and amount estimated) |
| EMOD | Daniel Klein, Anna Bershteyn, Edward Wenger, Karima Nigmatulina, Philip Eckhoff | Microsimulation | HIV prevalence time series (ANC '90–'09) and by age and sex (HSRC '08); sexual behaviour informed by Africa Centre for Health and Population Studies | Two-sex, age-structured | Transitory, informal, and marital relationships; heterogeneity in propensity for each type of relationship by age and sex | Early infection (×26), asymptomatic, AIDS (×7.2) | No, but includes male circumcision | 96% | Increase in condom usage; most change occurs between 1999 and 2009 |
| Fraser | Christophe Fraser | Deterministic | UNAIDS age 15–49 y HIV prevalence estimates, fit by least squares | Two-sex, age 15–49 y | Three sexual risk groups, with partially assortative mixing by risk group | Early infection (×26, adjusted for partner duration), CD4>200, CD4≤200 (×2.4) | No, but 76% of males are circumcised (based on Western Cape) | 90% | No |
| Goals | Carel Pretorius, John Stover | Deterministic | Calibrated to match time series in HIV prevalence from Spectrum projection | Two-sex, age 15–49 y | Not sexually active, low, medium, high (CSW and clients) risk, plus IDU and MSM; mixing perfectly assortative by risk group except low risk mix with CSW client | Early infection (×28), asymptomatic, symptomatic (×7.3) | 1.4 times greater | 92% | Increase in condom usage over 1996 to 2009 |
| Granich | Brian Williams, Reuben Granich | Deterministic | Calibrated to annual national age 15–49 y prevalence estimates | Single-sex, age 15–49 y | Homogeneous | No | Not applicable | 99% | No |
| HIV Portfolio | Elisa Long, Margaret Brandeau, Douglas Owens | Deterministic | Initialized to current epidemic state in year 2011 | Two-sex, age 15–49 y | Homogeneous | Early infection (∼×5), CD4>350, 350>CD4>200 (∼×1.6), CD4≤200 (∼×2) | ∼1.5 times greater, plus circumcision | 90% | Not applicable |
| STDSIM | Jan Hontelez, Sake de Vlas, Frank Tanser, Roel Bakker, Till Bärnighausen, Marie-Louise Newell, Rob Baltussen, Mark Lurie | Microsimulation | Calibrated to the Hlabisa subdistrict of KwaZulu-Natal using data from the Africa Centre for Health and Population Studies | Two-sex, age-structured | Marriages, casual partnerships, and commercial sex; heterogeneity in propensity to form each type or relationship; changes with age | Early infection (×15), asymptomatic, symptomatic (×3), AIDS (×7.5) | 2 times greater, plus circumcision | 92% | Increase in condom usage and improvement in STI treatment over 1995 to 2003 |
| STI-HIV Interaction | Leigh Johnson | Deterministic | Age-specific household prevalence (HSRC '02, '05, '08) and age-specific ANC prevalence ('90–'08) estimated using Bayesian framework | Two-sex, age-structured (5-y age groups) | High and low risk assortatively mixing; further stratified by short- and long-term partnerships, plus CSW | Early infection (×10), asymptomatic, pre-AIDS (×2.5), AIDS (×5) | ∼2.5 times greater | 90% (range: 78%–98%) | Increase in condom usage; most of increase occurs between 1995 and 2005 |
| Synthesis Transmission | Valentina Cambiano, Andrew Phillips, Deenan Pillay, Jens Lundgren, Geoff Garnett | Microsimulation | Calibrated using national HH survey data (HSRC '02, '05, '08) | Two-sex, age-structured | Primary partner and short-term partners; four different risk groups for propensity for short-term partners; semi-assortative by age | Early infection, then transmission determined by VL (primary partner's VL tracked, short-term sampled from population VL distribution) | ∼1.5 times greater | Determined by adherence and viral load | Reduction in number of unprotected partners over period 1996 to 2008 |
ANC, antenatal clinic; CSW, commercial sex worker; HH, household; HSRC, South African Human Sciences Research Council; IDU, injecting drug user; MSM, men who have sex with men; STI, sexually transmitted infection; VL, viral load.
Number of adults starting ART each year in the short term.
| Year | “Low" Future Scale-Up | “Baseline" Future Scale-Up | “Medium" Future Scale-Up | “High" Future Scale-Up |
| 2012 | 400,000 | 400,000 | 600,000 | 800,000 |
| 2013 | 200,000 | 400,000 | 600,000 | 900,000 |
| 2014 | 200,000 | 400,000 | 600,000 | 900,000 |
| 2015 | 200,000 | 400,000 | 600,000 | 700,000 |
| 2016 | 200,000 | 400,000 | 600,000 | 600,000 |
| Total | 1,200,000 | 2,000,000 | 3,000,000 | 3,900,000 |
Number of adults (age 15 y and older) initiating ART between midpoint of the previous year and the midpoint of indicated year.
Figure 1No-treatment counterfactual epidemic trends.
Male (left) and female (right) HIV prevalence (top) and incidence (bottom) amongst 15- to 49-y-olds for counterfactual HIV epidemics with no ART. The STDSIM model is calibrated to a more severe epidemic in the Hlabisa subdistrict of KwaZulu-Natal Province, South Africa. The CD4 HIV/ART and Granich models do not stratify by sex, and the same prevalence and incidence curves are plotted for both sexes for these models. PYs, person-years.
Selected model outputs for counterfactual simulation with no ART.
| Model Name | Age 15–49 y HIV Prevalence in Year 2012 (Percent) | Sex Ratio in Prevalence, Year 2012 (Female/Male) | Age 15–49 y HIV Incidence in Year 2012 (per 100 Person-Years) | Sex ratio in Incidence, Year 2012 (Female/Male) | Average Annual Population Growth Rate, Age 15+ y Population (per 100 People) | Year of Peak HIV Incidence | Percentage Change from Peak Incidence to year 2012 (Percent) | Percentage Change in Incidence, Year 2012 to 2020 (Percent) | Percentage Change in Incidence, Year 2020 to 2050 (Percent) | |||||||
| Male | Female | Male | Female | 2012–2020 | 2012–2050 | Male | Female | Male | Female | Male | Female | Male | Female | |||
| BBH | 10.4 | 16.8 | 1.6 | 1.2 | 2.2 | 1.8 | 0.5 | 0.5 | −9 | −13 | −30 | −30 | ||||
| Bendavid | 13.6 | 19.4 | 1.4 | 1.7 | 1.7 | 1.0 | 0.8 | 1.0 | −33 | −29 | ||||||
| CD4 HIV/ART | 14.8 | 1.3 | 1.5 | 1.1 | 1998 | −61 | −15 | −13 | ||||||||
| Eaton | 11.1 | 19.2 | 1.7 | 1.1 | 2.0 | 1.9 | 1.4 | 1.5 | 1996 | 1997 | −45 | −36 | −4 | −4 | −2 | −1 |
| EMOD | 15.4 | 19.9 | 1.3 | 1.5 | 1.8 | 1.2 | 0.6 | 0.5 | 2001 | 2000 | −23 | −18 | −7 | −8 | −25 | −25 |
| Fraser | 15.4 | 18.0 | 1.2 | 1.4 | 1.7 | 1.2 | −0.2 | 0.0 | 1997 | 1997 | −40 | −42 | −8 | −10 | −19 | −19 |
| Goals | 16.0 | 20.0 | 1.3 | 2.0 | 2.6 | 1.3 | 0.3 | 0.1 | 1998 | 1999 | −36 | −25 | −3 | −1 | 3 | 5 |
| Granich | 14.9 | 1.7 | −0.2 | −0.1 | 1997 | −22 | 1 | 0 | ||||||||
| HIV Portfolio | 15.9 | 22.0 | 1.4 | 2.3 | 2.6 | 1.1 | −0.8 | −0.6 | −11 | 3 | −19 | −18 | ||||
| STDSIM | 23.1 | 33.0 | 1.4 | 3.0 | 3.9 | 1.3 | −1.3 | −1.3 | 1995 | 2003 | −6 | 3 | 2 | 2 | −8 | −7 |
| STI-HIV | 12.6 | 20.0 | 1.6 | 1.4 | 2.3 | 1.6 | 0.4 | 0.1 | 1999 | 1999 | −28 | −23 | −5 | −6 | −6 | −11 |
| Synthesis Transmission | 15.2 | 23.1 | 1.5 | 1.6 | 2.4 | 1.5 | 0.7 | 0.5 | 2001 | 2005 | −18 | −25 | −43 | −47 | −12 | −15 |
Average annual growth rate for years 2012 to 2040.
Model calibrated to HIV epidemic in KwaZulu-Natal Province.
Figure 2Impact of treatment for a scenario with eligibility at CD4≤350 cells/µl, 80% access, and 85% retention.
(A) The percentage reduction in HIV incidence in the years 2020 and 2050 when eligibility for treatment is at CD4 count ≤350 cells/µl, 80% of individuals are treated, and 85% are retained on treatment after 3 y. (B) The cumulative number of person-years of ART provided per infection averted for the same scenario. Horizontal lines indicate 95% credible intervals (CI). For the Bendavid model, results in year 2040 are reported in the right panels.
Figure 3Proportion reduction in HIV incidence in year 2020.
For each model, the proportion reduction in HIV incidence in year 2020 for increasing access levels from 50% to 100% (horizontal axis). ART eligibility thresholds are indicated by line colour; 85% retention is indicated by solid lines, and perfect 100% retention is indicated by dashed lines.
Figure 4Cumulative number of person-years of ART provided per infection averted through year 2020.
The cumulative person-years of ART provided per infection averted through the year 2020 for increasing access levels from 50% to 100% (horizontal axis), assuming 85% retention after 3 y. ART eligibility thresholds of are indicated by line colour. Varying retention did not affect trends between access and efficiency for any models.
Figure 5Impact of treatment by transmission in each CD4 category.
(A) The percentage of all HIV transmissions from individuals in each CD4 cell count category in year 2012, in the no-ART counterfactual simulation. (B) The reduction in incidence in year 2020, for the 80% access and 85% retention scenario, according to the cumulative proportion of transmission that occurs after eligibility (A). For the scenario where all HIV-positive adults are eligible (“all HIV+ eligible"), the percentage of transmission after ART eligibility is the percentage of transmission that occurs after the end of primary HIV infection. Colours for models are the same as in Figures 1 and 2. The BBH, Bendavid, and STI-HIV Interaction models do not estimate the proportion of transmission in each CD4 category and are not included in this figure.
Figure 6The impact of the existing ART programme in South Africa on HIV prevalence and incidence.
The percentage increase in HIV prevalence (top) and the percentage reduction in HIV incidence rate (bottom) compared to what would have occurred in the absence of any ART for years the 2006 to 2011. These are estimated by comparing HIV prevalence and incidence in a model calibrated to the existing scale-up of ART in South Africa from 2001 to 2011 with a model simulation with no ART provision. The CD4 HIV/ART, Eaton, Goals, Granich, and STI-HIV Interaction models use the same estimates of the number starting ART each year (from [45]). Fraser uses an existing calibration to the ART scale-up in the Western Cape Province. STDSIM is calibrated to the number of people on ART in the Hlabisa subdistrict. Vertical lines on the Eaton and STI-HIV Interaction models indicate 95% credible intervals (CI).
HIV incidence rate per 100 person-years in year 2016 for different potential scenarios of future ART scale-up.
| Model | “Low" Future Scale-Up | “Baseline" Future Scale-Up | “Medium" Future Scale-Up | “High" Future Scale-Up | ||||
| HIV Incidence 2016 | Number Different from “Baseline" | HIV Incidence 2016 | Number Different from “Baseline" | HIV Incidence 2016 | Number Different from “Baseline" | HIV Incidence 2016 | Number Different from “Baseline" | |
| Bendavid | 1.20 | 39,000 | 1.14 | — | 1.06 | −64,000 | 0.89 | −270,000 |
| CD4 HIV/ART | 1.77 | 176,000 | 1.21 | — | 0.80 | −327,000 | 0.54 | −506,000 |
| Eaton | 1.23 (1.07, 1.39) | 106,000 (100,000, 113,000) | 1.05 (0.89, 1.21) | — | 0.79 (0.65, 0.95) | −111,000 (−118,000, −101,000) | 0.70 (0.56, 0.83) | −310,000 (−334,000, −286,000) |
| Goals | 1.50 | 186,000 | 1.16 | — | 0.88 | −187,000 | 0.64 | −419,000 |
| Granich | 1.34 | 142,000 | 1.14 | — | 0.87 | −225,000 | 0.53 | −521,000 |
Number of adults (age 15 y and older) initiating ART between midpoint of the previous year and the midpoint of indicated year.
HIV incidence rate per 100 susceptible person-years amongst 15- to 49-y-olds at midpoint of year 2016.
Cumulative number of additional new infections over the period mid-2011 to mid-2016 compared to “baseline" future scale-up scenario (rounded to nearest 1,000).
The Eaton model reports posterior mean and 95% credible intervals.