Literature DB >> 22802393

Fungal communities in soils along a vegetative ecotone.

Justine Karst1, Bridget Piculell, Christy Brigham, Michael Booth, Jason D Hoeksema.   

Abstract

We investigated the community composition and diversity of soil fungi along a sharp vegetative ecotone between coastal sage scrub (CSS) and nonnative annual grassland habitat at two sites in coastal California. USA- We pooled soil samples across 29 m transects on either side of the ecotone at each of the two sites, and. using clone libraries of fungal ribosomal DNA, we identified 280 operational taxonomic units (OTUs) from a total 40 g soil. We combined information from partial LSU and ITS sequences and found that the majority of OTUs belonged to the phylum Ascomycota, followed by Basidiomycota. Within the Ascomycota. a quarter of OTUs were Sordariomycetes. 17% were Leotiomycet.es, 16% were Dothideomycetes and the remaining OTUs were distributed among the classes Eurotiomycetes, Pezizomycetes, Lecanoromycetes, Orbiliomycetes and Arthoniomycetes. Within the Basidiomycota. all OTUs but one belonged to the subphylum Agaricomycotina. We also sampled plant communities at the same sites to offer a point of comparison for patterns in richness of fungal communities. Fungal communities had higher alpha and beta diversity than plant communities; fungal communities were approximately 20 times as rich as plant communities and the majority of OTUs were found in single soil samples. Soils harbored a unique mycoflora that did not reveal vegetative boundaries or site differences. High alpha and beta diversity and possible sampling artifacts necessitate extensive sampling to reveal differentiation in these fungal communities.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22802393     DOI: 10.3852/12-042

Source DB:  PubMed          Journal:  Mycologia        ISSN: 0027-5514            Impact factor:   2.696


  4 in total

1.  Fungal diversity in soils across a gradient of preserved Brazilian Cerrado.

Authors:  Ademir Sergio Ferreira de Araujo; Walderly Melgaço Bezerra; Vilma Maria Dos Santos; Luis Alfredo Pinheiro Leal Nunes; Maria do Carmo Catanho Pereira de Lyra; Marcia do Vale Barreto Figueiredo; Vania Maria Maciel Melo
Journal:  J Microbiol       Date:  2017-01-27       Impact factor: 3.422

2.  Ectomycorrhizal Community Structure of Salix and Betula spp. at a Saline Site in Central Poland in Relation to the Seasons and Soil Parameters.

Authors:  Katarzyna Hrynkiewicz; Sonia Szymańska; Agnieszka Piernik; Dominika Thiem
Journal:  Water Air Soil Pollut       Date:  2015-03-19       Impact factor: 2.520

3.  Isolation, Identification, and Biocontrol Potential of Root Fungal Endophytes Associated with Solanaceous Plants against Potato Late Blight (Phytophthora infestans).

Authors:  Abbas El-Hasan; Grace Ngatia; Tobias I Link; Ralf T Voegele
Journal:  Plants (Basel)       Date:  2022-06-18

4.  Responses of soil microeukaryotic communities to short-term fumigation-incubation revealed by MiSeq amplicon sequencing.

Authors:  Lin Chen; Jianming Xu; Youzhi Feng; Juntao Wang; Yongjie Yu; Philip C Brookes
Journal:  Front Microbiol       Date:  2015-10-20       Impact factor: 5.640

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.