Literature DB >> 22800615

A functional germline variant in the P53 polyadenylation signal and risk of esophageal squamous cell carcinoma.

Liqing Zhou1, Qipeng Yuan, Ming Yang.   

Abstract

AIM: P53 plays a critical role in the maintenance of genomic stability as well as the control of cell growth and apoptosis. Recently, an uncommon P53 genetic variant (rs78378222) was reported to be significantly associated with multiple cancers in Caucasians in a genome-wide association study. rs78378222 locates in the 3'-untranslated region of the P53 gene, and this A-to-C polymorphism results in changes of the AATAAA polyadenylation signal to AATACA, which leads to impaired 3'-end processing of P53 mRNA and decreased P53 expression.
METHODS: We evaluated the association between this polymorphism and esophageal squamous cell carcinoma (ESCC) risk in a case-control cohort consisting of 405 ESCC patients and 810 healthy controls. Odds ratios (ORs) and 95% confidence intervals (CIs) were calculated by logistic regression.
RESULTS: We did observe this polymorphism with low minor allele frequency in Chinese Han population. Additionally, significantly increased ESCC risk was associated with P53 rs78378222 A>C polymorphism. Compared with rs78378222AA carriers, the OR of developing ESCC for AC carriers was 3.22 (95% CI=1.71-6.33, P=1.34×10(-4)).
CONCLUSION: These results suggest that this functional uncommon P53 rs78378222 variant is associated with ESCC risk in the current Han Chinese population.
Copyright © 2012 Elsevier B.V. All rights reserved.

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Year:  2012        PMID: 22800615     DOI: 10.1016/j.gene.2012.07.007

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  16 in total

1.  Further Confirmation of Germline Glioma Risk Variant rs78378222 in TP53 and Its Implication in Tumor Tissues via Integrative Analysis of TCGA Data.

Authors:  Zhaoming Wang; Preetha Rajaraman; Beatrice S Melin; Charles C Chung; Weijia Zhang; Roberta McKean-Cowdin; Dominique Michaud; Meredith Yeager; Anders Ahlbom; Demetrius Albanes; Ulrika Andersson; Laura E Beane Freeman; Julie E Buring; Mary Ann Butler; Tania Carreón; Maria Feychting; Susan M Gapstur; J Michael Gaziano; Graham G Giles; Goran Hallmans; Roger Henriksson; Judith Hoffman-Bolton; Peter D Inskip; Cari M Kitahara; Loic Le Marchand; Martha S Linet; Shengchao Li; Ulrike Peters; Mark P Purdue; Nathaniel Rothman; Avima M Ruder; Howard D Sesso; Gianluca Severi; Meir Stampfer; Victoria L Stevens; Kala Visvanathan; Sophia S Wang; Emily White; Anne Zeleniuch-Jacquotte; Robert Hoover; Joseph F Fraumeni; Nilanjan Chatterjee; Patricia Hartge; Stephen J Chanock
Journal:  Hum Mutat       Date:  2015-05-18       Impact factor: 4.878

2.  Association between microsomal epoxide hydrolase 1 polymorphisms and susceptibility to esophageal cancer: a meta-analysis.

Authors:  Weixin Zhao; Jianfeng Luo; Xuwei Cai
Journal:  Tumour Biol       Date:  2013-05-17

Review 3.  The dichotomy of p53 regulation by noncoding RNAs.

Authors:  Qipan Deng; Lindsey Becker; Xiaodong Ma; Xiaoming Zhong; Ken Young; Kenneth Ramos; Yong Li
Journal:  J Mol Cell Biol       Date:  2014-04-04       Impact factor: 6.216

4.  Single nucleotide variation in the TP53 3' untranslated region in diffuse large B-cell lymphoma treated with rituximab-CHOP: a report from the International DLBCL Rituximab-CHOP Consortium Program.

Authors:  Yong Li; Michael W Gordon; Zijun Y Xu-Monette; Carlo Visco; Alexander Tzankov; Dehui Zou; Lugui Qiu; Santiago Montes-Moreno; Karen Dybkaer; Attilio Orazi; Youli Zu; Govind Bhagat; Kristy L Richards; Eric D Hsi; William W L Choi; J Han van Krieken; Qin Huang; Weiyun Ai; Maurilio Ponzoni; Andrés J M Ferreri; Jane N Winter; Ronald S Go; Miguel A Piris; Michael B Møller; Lin Wu; Michael Wang; Kenneth S Ramos; L Jeffrey Medeiros; Ken H Young
Journal:  Blood       Date:  2013-03-20       Impact factor: 22.113

5.  The ALDH7A1 genetic polymorphisms contribute to development of esophageal squamous cell carcinoma.

Authors:  Haiyong Wang; Lei Tong; Jinyu Wei; Wenting Pan; Lichao Li; Yunxia Ge; Liqing Zhou; Qipeng Yuan; Changchun Zhou; Ming Yang
Journal:  Tumour Biol       Date:  2014-09-12

6.  Alterations in polyadenylation and its implications for endocrine disease.

Authors:  Anders Rehfeld; Mireya Plass; Anders Krogh; Lennart Friis-Hansen
Journal:  Front Endocrinol (Lausanne)       Date:  2013-05-08       Impact factor: 5.555

7.  Association between a rare novel TP53 variant (rs78378222) and melanoma, squamous cell carcinoma of head and neck and lung cancer susceptibility in non-Hispanic Whites.

Authors:  Xiaoxiang Guan; Li-E Wang; Zhensheng Liu; Erich M Sturgis; Qingyi Wei
Journal:  J Cell Mol Med       Date:  2013-06-07       Impact factor: 5.310

Review 8.  Impaired pre-mRNA processing and altered architecture of 3' untranslated regions contribute to the development of human disorders.

Authors:  Eva Michalova; Borivoj Vojtesek; Roman Hrstka
Journal:  Int J Mol Sci       Date:  2013-07-26       Impact factor: 5.923

9.  Functional polymorphisms in interleukin-23 receptor and susceptibility to esophageal squamous cell carcinoma in Chinese population.

Authors:  Bin Ni; Shaomu Chen; Hongya Xie; Haitao Ma
Journal:  PLoS One       Date:  2014-02-28       Impact factor: 3.240

10.  Replication study of ESCC susceptibility genetic polymorphisms locating in the ADH1B-ADH1C-ADH7 cluster identified by GWAS.

Authors:  Jiwen Wang; Jinyu Wei; Xiaoling Xu; Wenting Pan; Yunxia Ge; Changchun Zhou; Chao Liu; Jia Gao; Ming Yang; Weimin Mao
Journal:  PLoS One       Date:  2014-04-10       Impact factor: 3.240

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