Literature DB >> 22798933

(3Z)-1,1,1-Trifluoro-4-phenyl-4-[(2-{[(1Z)-4,4,4-trifluoro-3-oxo-1-phenyl-but-1-en-1-yl]amino}-eth-yl)amino]-but-3-en-2-one.

Abdullah M Asiri, Hassan M Faidallah, Khalid A Alamry, Seik Weng Ng, Edward R T Tiekink.   

Abstract

In the title compound, C(22)H(18)F(6)N(2)O(2), the five atoms comprising each O=C-C=C-N fragment are almost coplanar (the r.m.s. deviation for the fitted atoms being 0.008 and 0.002 Å) and form a dihedral angle of 47.70 (12)°. The phenyl ring attached to each of the O=C-C=C-N fragments is twisted out of the respective plane with dihedral angles of 64.46 (11) and 61.82 (10)°, respectively. An almost orthogonal relationship for the phenyl rings is indicated by the dihedral angle between them of 78.19 (14)°. The conformation about each ethyl-ene bond is Z, which allows for the formation of intra-molecular N-H⋯O hydrogen bonds which close S(6) loops. The most prominent feature of the crystal packing are N-H⋯O hydrogen bonds that result in supra-molecular chains along the a axis. The F atoms of one -CF(3) groups are disordered over three sets of sites with site-occupation factors of 0.318 (4), 0.360 (10) and 0.322 (9).

Entities:  

Year:  2012        PMID: 22798933      PMCID: PMC3394068          DOI: 10.1107/S1600536812028875

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the structure of the compound in which the CF3 substituents of the title compound are replaced by 2-thienyl groups, see: Asiri et al. (2011 ▶).

Experimental

Crystal data

C22H18F6N2O2 M = 456.38 Monoclinic, a = 13.0411 (9) Å b = 15.897 (1) Å c = 10.9417 (9) Å β = 112.306 (9)° V = 2098.6 (3) Å3 Z = 4 Mo Kα radiation μ = 0.13 mm−1 T = 100 K 0.35 × 0.15 × 0.15 mm

Data collection

Agilent SuperNova Dual diffractometer with an Atlas detector Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012 ▶) T min = 0.538, T max = 1.000 10523 measured reflections 4845 independent reflections 3146 reflections with I > 2σ(I) R int = 0.041

Refinement

R[F 2 > 2σ(F 2)] = 0.060 wR(F 2) = 0.165 S = 1.02 4845 reflections 309 parameters 19 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.51 e Å−3 Δρmin = −0.50 e Å−3 Data collection: CrysAlis PRO (Agilent, 2012 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812028875/bt5954sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812028875/bt5954Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812028875/bt5954Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C22H18F6N2O2F(000) = 936
Mr = 456.38Dx = 1.444 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2319 reflections
a = 13.0411 (9) Åθ = 2.4–27.5°
b = 15.897 (1) ŵ = 0.13 mm1
c = 10.9417 (9) ÅT = 100 K
β = 112.306 (9)°Prism, colourless
V = 2098.6 (3) Å30.35 × 0.15 × 0.15 mm
Z = 4
Agilent SuperNova Dual diffractometer with an Atlas detector4845 independent reflections
Radiation source: SuperNova (Mo) X-ray Source3146 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.041
Detector resolution: 10.4041 pixels mm-1θmax = 27.6°, θmin = 2.4°
ω scanh = −16→16
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012)k = −15→20
Tmin = 0.538, Tmax = 1.000l = −10→14
10523 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.060Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.165H atoms treated by a mixture of independent and constrained refinement
S = 1.02w = 1/[σ2(Fo2) + (0.0641P)2 + 1.085P] where P = (Fo2 + 2Fc2)/3
4845 reflections(Δ/σ)max = 0.002
309 parametersΔρmax = 0.51 e Å3
19 restraintsΔρmin = −0.50 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
O11.01821 (13)0.40373 (11)0.50828 (17)0.0287 (4)
O20.44440 (13)0.44780 (12)0.37678 (17)0.0304 (4)
N20.63608 (17)0.52490 (14)0.3995 (2)0.0276 (5)
N10.86126 (16)0.46861 (13)0.5887 (2)0.0253 (5)
F11.0661 (7)0.2668 (4)0.3981 (6)0.0556 (19)*0.318 (4)
F21.1419 (5)0.2588 (4)0.6132 (6)0.0514 (19)*0.318 (4)
F30.9898 (5)0.1853 (4)0.4922 (7)0.041 (2)*0.318 (4)
F1'1.0158 (7)0.2543 (4)0.3630 (4)0.0332 (16)*0.360 (10)
F2'1.1461 (3)0.2603 (3)0.5612 (7)0.0142 (13)*0.360 (10)
F3'1.0020 (5)0.1831 (3)0.5290 (9)0.0150 (14)*0.360 (10)
F1"0.9793 (7)0.2360 (5)0.3631 (5)0.055 (2)*0.322 (9)
F2"1.1364 (4)0.2625 (3)0.5098 (9)0.0290 (17)*0.322 (9)
F3"1.0224 (6)0.1860 (4)0.5657 (8)0.038 (2)*0.322 (9)
F40.35986 (14)0.28737 (11)0.28834 (17)0.0491 (5)
F50.37037 (12)0.31466 (10)0.10070 (16)0.0394 (4)
F60.26345 (11)0.38801 (10)0.16715 (15)0.0382 (4)
C11.0361 (2)0.25715 (17)0.4985 (3)0.0370 (7)
C20.98029 (19)0.33504 (16)0.5274 (2)0.0260 (6)
C30.8934 (2)0.32256 (17)0.5709 (3)0.0284 (6)
H30.87120.26660.57910.034*
C40.83811 (19)0.38913 (16)0.6026 (2)0.0252 (5)
C50.75063 (19)0.36831 (17)0.6547 (3)0.0277 (6)
C60.6563 (2)0.32548 (17)0.5745 (3)0.0314 (6)
H60.64800.30970.48750.038*
C70.5742 (2)0.30574 (19)0.6215 (3)0.0379 (7)
H70.50910.27730.56600.045*
C80.5872 (2)0.3275 (2)0.7495 (3)0.0409 (7)
H80.53100.31380.78150.049*
C90.6812 (2)0.3689 (2)0.8300 (3)0.0413 (7)
H90.69020.38320.91780.050*
C100.7632 (2)0.38983 (19)0.7832 (3)0.0347 (7)
H100.82780.41880.83880.042*
C110.80105 (19)0.54221 (16)0.6068 (3)0.0274 (6)
H11A0.85500.58490.65950.033*
H11B0.75510.52550.65690.033*
C120.72688 (19)0.58088 (16)0.4758 (3)0.0279 (6)
H12A0.69560.63430.49300.033*
H12B0.77200.59410.42320.033*
C130.62859 (19)0.47929 (17)0.2947 (2)0.0265 (6)
C140.71669 (19)0.48676 (17)0.2393 (2)0.0271 (6)
C150.7362 (2)0.56297 (19)0.1885 (3)0.0369 (7)
H150.69250.61100.18740.044*
C160.8199 (2)0.5682 (2)0.1397 (3)0.0437 (8)
H160.83350.62010.10530.052*
C170.8833 (2)0.4990 (2)0.1406 (3)0.0440 (8)
H170.94090.50340.10790.053*
C180.8634 (2)0.4231 (2)0.1890 (3)0.0396 (7)
H180.90740.37540.18960.047*
C190.7791 (2)0.41635 (19)0.2368 (3)0.0315 (6)
H190.76420.36370.26780.038*
C200.54108 (19)0.42385 (16)0.2348 (2)0.0267 (6)
H200.53970.39250.16030.032*
C210.45487 (19)0.41255 (16)0.2804 (2)0.0263 (6)
C220.3625 (2)0.35051 (17)0.2078 (3)0.0302 (6)
H10.918 (3)0.479 (2)0.562 (3)0.054 (10)*
H20.583 (3)0.5189 (19)0.430 (3)0.046 (9)*
U11U22U33U12U13U23
O10.0229 (9)0.0269 (10)0.0412 (10)−0.0004 (8)0.0176 (8)0.0006 (8)
O20.0222 (8)0.0362 (11)0.0367 (10)−0.0024 (8)0.0155 (8)−0.0076 (9)
N20.0201 (10)0.0286 (12)0.0379 (12)−0.0047 (9)0.0155 (9)−0.0050 (10)
N10.0197 (10)0.0252 (12)0.0355 (11)−0.0005 (9)0.0156 (9)−0.0017 (10)
F40.0464 (10)0.0404 (10)0.0557 (11)−0.0172 (9)0.0140 (9)0.0040 (9)
F50.0262 (8)0.0437 (10)0.0501 (9)−0.0018 (7)0.0167 (7)−0.0203 (8)
F60.0196 (7)0.0469 (10)0.0478 (9)0.0001 (7)0.0125 (7)−0.0173 (8)
C10.0284 (14)0.0281 (15)0.0609 (19)−0.0017 (12)0.0241 (14)0.0029 (14)
C20.0188 (11)0.0237 (14)0.0340 (13)0.0021 (10)0.0085 (10)0.0008 (11)
C30.0231 (12)0.0240 (14)0.0407 (14)−0.0012 (11)0.0148 (11)0.0035 (12)
C40.0172 (11)0.0297 (14)0.0278 (12)−0.0022 (11)0.0075 (10)0.0006 (11)
C50.0204 (11)0.0289 (14)0.0366 (13)0.0010 (11)0.0139 (11)0.0059 (12)
C60.0244 (12)0.0327 (15)0.0378 (14)−0.0052 (12)0.0126 (11)0.0031 (12)
C70.0247 (13)0.0413 (17)0.0482 (16)−0.0053 (13)0.0144 (12)0.0106 (14)
C80.0283 (14)0.0485 (19)0.0539 (18)0.0021 (14)0.0245 (14)0.0166 (15)
C90.0376 (15)0.056 (2)0.0385 (15)−0.0001 (15)0.0235 (13)0.0081 (15)
C100.0254 (13)0.0469 (18)0.0321 (14)−0.0035 (13)0.0114 (11)0.0032 (13)
C110.0224 (12)0.0255 (14)0.0392 (14)−0.0042 (11)0.0170 (11)−0.0078 (12)
C120.0230 (12)0.0236 (13)0.0419 (14)−0.0031 (11)0.0178 (11)−0.0036 (12)
C130.0218 (12)0.0253 (14)0.0340 (13)0.0052 (11)0.0123 (11)0.0027 (11)
C140.0214 (12)0.0322 (14)0.0287 (13)−0.0039 (11)0.0105 (10)−0.0007 (11)
C150.0333 (14)0.0386 (17)0.0404 (15)−0.0017 (13)0.0159 (13)0.0055 (13)
C160.0382 (16)0.058 (2)0.0377 (15)−0.0148 (16)0.0173 (13)0.0064 (15)
C170.0307 (14)0.071 (2)0.0371 (16)−0.0130 (16)0.0208 (13)−0.0074 (16)
C180.0277 (14)0.057 (2)0.0376 (15)0.0010 (14)0.0161 (12)−0.0115 (14)
C190.0263 (13)0.0392 (16)0.0314 (13)−0.0011 (12)0.0136 (11)−0.0063 (12)
C200.0213 (12)0.0282 (14)0.0313 (13)−0.0007 (11)0.0109 (10)−0.0032 (11)
C210.0206 (12)0.0248 (13)0.0333 (13)0.0002 (11)0.0099 (11)−0.0011 (11)
C220.0226 (12)0.0306 (15)0.0385 (14)−0.0002 (11)0.0129 (11)−0.0045 (12)
O1—C21.249 (3)C7—C81.389 (4)
O2—C211.247 (3)C7—H70.9500
N2—C131.328 (3)C8—C91.376 (4)
N2—C121.463 (3)C8—H80.9500
N2—H20.88 (3)C9—C101.390 (4)
N1—C41.321 (3)C9—H90.9500
N1—C111.464 (3)C10—H100.9500
N1—H10.91 (3)C11—C121.521 (4)
F1—C11.308 (5)C11—H11A0.9900
F2—C11.471 (5)C11—H11B0.9900
F3—C11.282 (6)C12—H12A0.9900
F1'—C11.405 (5)C12—H12B0.9900
F2'—C11.335 (4)C13—C201.393 (4)
F3'—C11.345 (5)C13—C141.493 (3)
F1"—C11.422 (6)C14—C191.390 (4)
F2"—C11.269 (5)C14—C151.396 (4)
F3"—C11.397 (5)C15—C161.388 (4)
F4—C221.344 (3)C15—H150.9500
F5—C221.342 (3)C16—C171.374 (4)
F6—C221.336 (3)C16—H160.9500
C1—C21.529 (4)C17—C181.382 (4)
C2—C31.400 (3)C17—H170.9500
C3—C41.397 (4)C18—C191.389 (4)
C3—H30.9500C18—H180.9500
C4—C51.493 (3)C19—H190.9500
C5—C61.388 (4)C20—C211.404 (3)
C5—C101.395 (4)C20—H200.9500
C6—C71.388 (4)C21—C221.526 (4)
C6—H60.9500
C13—N2—C12127.1 (2)C9—C10—C5120.0 (3)
C13—N2—H2117 (2)C9—C10—H10120.0
C12—N2—H2116 (2)C5—C10—H10120.0
C4—N1—C11126.2 (2)N1—C11—C12112.2 (2)
C4—N1—H1118 (2)N1—C11—H11A109.2
C11—N1—H1116 (2)C12—C11—H11A109.2
F3—C1—F1110.2 (4)N1—C11—H11B109.2
F2'—C1—F3'107.3 (4)C12—C11—H11B109.2
F2"—C1—F3"109.6 (4)H11A—C11—H11B107.9
F2'—C1—F1'106.2 (3)N2—C12—C11112.3 (2)
F3'—C1—F1'106.6 (4)N2—C12—H12A109.1
F2"—C1—F1"103.1 (4)C11—C12—H12A109.1
F3"—C1—F1"103.7 (4)N2—C12—H12B109.1
F3—C1—F2109.4 (4)C11—C12—H12B109.1
F1—C1—F2103.4 (4)H12A—C12—H12B107.9
F2"—C1—C2118.6 (3)N2—C13—C20122.0 (2)
F3—C1—C2118.8 (4)N2—C13—C14119.4 (2)
F1—C1—C2113.3 (4)C20—C13—C14118.6 (2)
F2'—C1—C2111.5 (3)C19—C14—C15119.6 (2)
F3'—C1—C2115.5 (3)C19—C14—C13119.4 (2)
F3"—C1—C2112.4 (3)C15—C14—C13121.0 (2)
F1'—C1—C2109.3 (3)C16—C15—C14119.7 (3)
F1"—C1—C2107.8 (3)C16—C15—H15120.2
F2—C1—C2100.1 (3)C14—C15—H15120.2
O1—C2—C3127.2 (2)C17—C16—C15120.5 (3)
O1—C2—C1115.1 (2)C17—C16—H16119.8
C3—C2—C1117.7 (2)C15—C16—H16119.8
C4—C3—C2122.6 (2)C16—C17—C18120.2 (3)
C4—C3—H3118.7C16—C17—H17119.9
C2—C3—H3118.7C18—C17—H17119.9
N1—C4—C3122.3 (2)C17—C18—C19120.2 (3)
N1—C4—C5119.8 (2)C17—C18—H18119.9
C3—C4—C5117.9 (2)C19—C18—H18119.9
C6—C5—C10119.6 (2)C14—C19—C18119.9 (3)
C6—C5—C4119.3 (2)C14—C19—H19120.1
C10—C5—C4121.1 (2)C18—C19—H19120.1
C7—C6—C5120.0 (3)C13—C20—C21122.5 (2)
C7—C6—H6120.0C13—C20—H20118.7
C5—C6—H6120.0C21—C20—H20118.7
C6—C7—C8120.1 (3)O2—C21—C20127.1 (2)
C6—C7—H7120.0O2—C21—C22114.4 (2)
C8—C7—H7120.0C20—C21—C22118.6 (2)
C9—C8—C7120.2 (2)F6—C22—F5106.5 (2)
C9—C8—H8119.9F6—C22—F4106.8 (2)
C7—C8—H8119.9F5—C22—F4106.5 (2)
C8—C9—C10120.1 (3)F6—C22—C21110.9 (2)
C8—C9—H9119.9F5—C22—C21114.9 (2)
C10—C9—H9119.9F4—C22—C21110.7 (2)
F2"—C1—C2—O127.6 (6)C7—C8—C9—C100.6 (5)
F3—C1—C2—O1−167.4 (4)C8—C9—C10—C5−0.5 (5)
F1—C1—C2—O1−35.7 (5)C6—C5—C10—C9−0.4 (4)
F2'—C1—C2—O152.0 (4)C4—C5—C10—C9−179.2 (3)
F3'—C1—C2—O1174.8 (5)C4—N1—C11—C12−104.0 (3)
F3"—C1—C2—O1157.3 (4)C13—N2—C12—C11−103.8 (3)
F1'—C1—C2—O1−65.0 (5)N1—C11—C12—N266.1 (3)
F1"—C1—C2—O1−89.0 (5)C12—N2—C13—C20175.8 (2)
F2—C1—C2—O173.7 (4)C12—N2—C13—C14−3.7 (4)
F2"—C1—C2—C3−152.8 (5)N2—C13—C14—C19118.6 (3)
F3—C1—C2—C312.2 (5)C20—C13—C14—C19−60.9 (3)
F1—C1—C2—C3144.0 (4)N2—C13—C14—C15−62.2 (3)
F2'—C1—C2—C3−128.3 (4)C20—C13—C14—C15118.2 (3)
F3'—C1—C2—C3−5.5 (5)C19—C14—C15—C16−1.9 (4)
F3"—C1—C2—C3−23.1 (5)C13—C14—C15—C16179.0 (2)
F1'—C1—C2—C3114.7 (5)C14—C15—C16—C170.2 (4)
F1"—C1—C2—C390.7 (5)C15—C16—C17—C180.7 (4)
F2—C1—C2—C3−106.6 (4)C16—C17—C18—C190.1 (4)
O1—C2—C3—C4−1.7 (4)C15—C14—C19—C182.7 (4)
C1—C2—C3—C4178.7 (2)C13—C14—C19—C18−178.2 (2)
C11—N1—C4—C3173.6 (2)C17—C18—C19—C14−1.8 (4)
C11—N1—C4—C5−6.8 (4)N2—C13—C20—C210.3 (4)
C2—C3—C4—N12.8 (4)C14—C13—C20—C21179.8 (2)
C2—C3—C4—C5−176.9 (2)C13—C20—C21—O2−0.7 (4)
N1—C4—C5—C6116.6 (3)C13—C20—C21—C22179.8 (2)
C3—C4—C5—C6−63.7 (3)O2—C21—C22—F656.6 (3)
N1—C4—C5—C10−64.5 (3)C20—C21—C22—F6−123.8 (3)
C3—C4—C5—C10115.1 (3)O2—C21—C22—F5177.4 (2)
C10—C5—C6—C71.2 (4)C20—C21—C22—F5−3.0 (4)
C4—C5—C6—C7−179.9 (2)O2—C21—C22—F4−61.8 (3)
C5—C6—C7—C8−1.1 (4)C20—C21—C22—F4117.7 (3)
C6—C7—C8—C90.2 (5)
D—H···AD—HH···AD···AD—H···A
N1—H1···O10.91 (3)2.02 (3)2.719 (3)133 (3)
N1—H1···O1i0.91 (3)2.28 (3)2.997 (3)135 (3)
N2—H2···O20.88 (3)2.02 (3)2.709 (3)134 (3)
N2—H2···O2ii0.88 (3)2.33 (3)3.039 (3)137 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1⋯O10.91 (3)2.02 (3)2.719 (3)133 (3)
N1—H1⋯O1i 0.91 (3)2.28 (3)2.997 (3)135 (3)
N2—H2⋯O20.88 (3)2.02 (3)2.709 (3)134 (3)
N2—H2⋯O2ii 0.88 (3)2.33 (3)3.039 (3)137 (3)

Symmetry codes: (i) ; (ii) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  1,1,1-Trifluoro-4-(thio-phen-2-yl)-4-[(2-{[4,4,4-trifluoro-3-oxo-1-(thio-phen-2-yl)but-1-en-1-yl]amino}-eth-yl)amino]-but-3-en-2-one.

Authors:  Abdullah M Asiri; Abdulrahman O Al-Youbi; Hassan M Faidallah; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-09-17
  2 in total

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