| Literature DB >> 22798929 |
Ai-Min Li1, Ya Zhang, Zhi-Wei Wang, Chong-Qing Wan.
Abstract
In the title compound, C(8)H(6)N(4)O(3)S, the dihedral angle between the pyrazine rings is 85.04 (1)°. In the crystal, mol-ecules are arranged along the a axis and are linked by C-H⋯N hydrogen bonds and pyrazine-pyrazine π-π inter-actions [centroid-centroid distance = 3.800 (1) Å, forming an infinite chain array. The chains are connected by C-H⋯O(oxide) hydrogen bonds into layers lying parallel to the ab plane. Along the c axis, the layers are stacked and linked through C-H⋯O(sulfon-yl) inter-actions, forming a three-dimensional network.Entities:
Year: 2012 PMID: 22798929 PMCID: PMC3394064 DOI: 10.1107/S1600536812028607
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C8H6N4O3S | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 365 reflections |
| θ = 2.6–28.4° | |
| µ = 0.33 mm−1 | |
| β = 117.813 (13)° | Needle-like, colourless |
| 0.45 × 0.30 × 0.25 mm | |
| Bruker APEXII CCD area-detector diffractometer | 2429 independent reflections |
| Radiation source: fine-focus sealed tube | 1586 reflections with |
| Graphite monochromator | |
| ω scans | θmax = 28.4°, θmin = 2.6° |
| Absorption correction: multi-scan ( | |
| 6606 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2429 reflections | (Δ/σ)max < 0.001 |
| 145 parameters | Δρmax = 0.85 e Å−3 |
| 0 restraints | Δρmin = −0.46 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| S1 | 0.50844 (11) | 0.33579 (5) | 0.25247 (12) | 0.0436 (3) | |
| N1 | 0.8484 (4) | 0.27476 (19) | 0.2912 (4) | 0.0531 (8) | |
| N2 | 0.8080 (4) | 0.12101 (18) | 0.4199 (4) | 0.0520 (8) | |
| N3 | 0.6907 (4) | 0.4321 (2) | 0.5196 (4) | 0.0540 (8) | |
| N4 | 0.7631 (6) | 0.5635 (2) | 0.3499 (6) | 0.0699 (10) | |
| O1 | 0.4354 (3) | 0.35188 (18) | 0.0788 (3) | 0.0581 (7) | |
| O2 | 0.3755 (4) | 0.31172 (17) | 0.3141 (4) | 0.0627 (8) | |
| O3 | 0.7852 (6) | 0.0494 (2) | 0.4742 (6) | 0.0996 (13) | |
| C1 | 0.6949 (4) | 0.25624 (19) | 0.3152 (4) | 0.0403 (7) | |
| C2 | 0.6667 (5) | 0.1820 (2) | 0.3776 (5) | 0.0494 (9) | |
| H2A | 0.5552 | 0.1732 | 0.3910 | 0.059* | |
| C3 | 0.9681 (5) | 0.1382 (2) | 0.4026 (5) | 0.0535 (9) | |
| H3A | 1.0685 | 0.0985 | 0.4351 | 0.064* | |
| C4 | 0.9844 (5) | 0.2134 (2) | 0.3375 (6) | 0.0582 (10) | |
| H4A | 1.0959 | 0.2229 | 0.3244 | 0.070* | |
| C5 | 0.6391 (4) | 0.4281 (2) | 0.3598 (4) | 0.0416 (8) | |
| C6 | 0.7790 (6) | 0.5037 (3) | 0.5944 (6) | 0.0627 (11) | |
| H6A | 0.8189 | 0.5105 | 0.7076 | 0.075* | |
| C7 | 0.8125 (6) | 0.5678 (3) | 0.5086 (7) | 0.0677 (13) | |
| H7A | 0.8734 | 0.6167 | 0.5664 | 0.081* | |
| C8 | 0.6737 (5) | 0.4914 (2) | 0.2717 (5) | 0.0561 (9) | |
| H8A | 0.6355 | 0.4843 | 0.1588 | 0.067* |
| S1 | 0.0286 (4) | 0.0384 (4) | 0.0661 (6) | −0.0005 (3) | 0.0238 (4) | −0.0064 (4) |
| N1 | 0.0336 (13) | 0.0392 (15) | 0.090 (2) | −0.0016 (11) | 0.0314 (14) | 0.0025 (14) |
| N2 | 0.0566 (17) | 0.0332 (14) | 0.073 (2) | 0.0047 (13) | 0.0357 (16) | 0.0039 (14) |
| N3 | 0.0531 (17) | 0.0451 (17) | 0.062 (2) | 0.0018 (13) | 0.0250 (15) | −0.0052 (14) |
| N4 | 0.069 (2) | 0.0405 (17) | 0.110 (3) | −0.0067 (16) | 0.050 (2) | −0.0055 (19) |
| O1 | 0.0378 (12) | 0.0647 (17) | 0.0632 (17) | 0.0072 (11) | 0.0165 (11) | −0.0084 (13) |
| O2 | 0.0493 (14) | 0.0492 (15) | 0.109 (2) | −0.0070 (12) | 0.0529 (15) | −0.0115 (14) |
| O3 | 0.117 (3) | 0.0558 (19) | 0.159 (4) | 0.020 (2) | 0.092 (3) | 0.033 (2) |
| C1 | 0.0313 (14) | 0.0330 (15) | 0.0563 (19) | −0.0009 (12) | 0.0203 (13) | −0.0058 (14) |
| C2 | 0.0477 (18) | 0.0394 (17) | 0.074 (2) | 0.0008 (14) | 0.0395 (18) | −0.0013 (16) |
| C3 | 0.0350 (16) | 0.0456 (19) | 0.072 (2) | 0.0044 (14) | 0.0187 (16) | −0.0014 (18) |
| C4 | 0.0315 (16) | 0.0463 (19) | 0.099 (3) | 0.0001 (14) | 0.0318 (18) | 0.0007 (19) |
| C5 | 0.0311 (14) | 0.0333 (15) | 0.062 (2) | 0.0036 (12) | 0.0230 (14) | −0.0017 (14) |
| C6 | 0.055 (2) | 0.056 (2) | 0.068 (3) | 0.0036 (18) | 0.0203 (19) | −0.017 (2) |
| C7 | 0.047 (2) | 0.041 (2) | 0.115 (4) | −0.0084 (16) | 0.038 (2) | −0.024 (2) |
| C8 | 0.055 (2) | 0.045 (2) | 0.072 (3) | 0.0007 (16) | 0.0323 (19) | −0.0001 (18) |
| S1—O1 | 1.425 (3) | N4—C8 | 1.351 (5) |
| S1—O2 | 1.426 (3) | C1—C2 | 1.366 (5) |
| S1—C5 | 1.784 (3) | C2—H2A | 0.9300 |
| S1—C1 | 1.790 (3) | C3—C4 | 1.362 (6) |
| N1—C1 | 1.328 (4) | C3—H3A | 0.9300 |
| N1—C4 | 1.343 (4) | C4—H4A | 0.9300 |
| N2—O3 | 1.281 (4) | C5—C8 | 1.382 (5) |
| N2—C3 | 1.339 (5) | C6—C7 | 1.374 (7) |
| N2—C2 | 1.368 (4) | C6—H6A | 0.9300 |
| N3—C5 | 1.312 (5) | C7—H7A | 0.9300 |
| N3—C6 | 1.333 (5) | C8—H8A | 0.9300 |
| N4—C7 | 1.306 (6) | ||
| O1—S1—O2 | 119.66 (17) | N2—C3—C4 | 120.2 (3) |
| O1—S1—C5 | 106.68 (17) | N2—C3—H3A | 119.9 |
| O2—S1—C5 | 109.23 (16) | C4—C3—H3A | 119.9 |
| O1—S1—C1 | 108.72 (16) | N1—C4—C3 | 123.6 (3) |
| O2—S1—C1 | 107.53 (17) | N1—C4—H4A | 118.2 |
| C5—S1—C1 | 103.92 (14) | C3—C4—H4A | 118.2 |
| C1—N1—C4 | 114.3 (3) | N3—C5—C8 | 124.2 (3) |
| O3—N2—C3 | 121.5 (3) | N3—C5—S1 | 116.4 (3) |
| O3—N2—C2 | 120.0 (3) | C8—C5—S1 | 119.4 (3) |
| C3—N2—C2 | 118.5 (3) | N3—C6—C7 | 121.7 (4) |
| C5—N3—C6 | 114.9 (4) | N3—C6—H6A | 119.1 |
| C7—N4—C8 | 115.9 (4) | C7—C6—H6A | 119.1 |
| N1—C1—C2 | 125.6 (3) | N4—C7—C6 | 123.4 (4) |
| N1—C1—S1 | 115.7 (2) | N4—C7—H7A | 118.3 |
| C2—C1—S1 | 118.6 (2) | C6—C7—H7A | 118.3 |
| C1—C2—N2 | 117.7 (3) | N4—C8—C5 | 119.8 (4) |
| C1—C2—H2A | 121.1 | N4—C8—H8A | 120.1 |
| N2—C2—H2A | 121.1 | C5—C8—H8A | 120.1 |
| C4—N1—C1—C2 | −1.3 (5) | N2—C3—C4—N1 | 1.6 (7) |
| C4—N1—C1—S1 | −179.2 (3) | C6—N3—C5—C8 | 1.0 (5) |
| O1—S1—C1—N1 | 59.3 (3) | C6—N3—C5—S1 | −176.7 (3) |
| O2—S1—C1—N1 | −169.8 (3) | O1—S1—C5—N3 | 169.1 (2) |
| C5—S1—C1—N1 | −54.1 (3) | O2—S1—C5—N3 | 38.4 (3) |
| O1—S1—C1—C2 | −118.8 (3) | C1—S1—C5—N3 | −76.1 (3) |
| O2—S1—C1—C2 | 12.1 (3) | O1—S1—C5—C8 | −8.7 (3) |
| C5—S1—C1—C2 | 127.8 (3) | O2—S1—C5—C8 | −139.4 (3) |
| N1—C1—C2—N2 | 0.1 (6) | C1—S1—C5—C8 | 106.1 (3) |
| S1—C1—C2—N2 | 178.0 (3) | C5—N3—C6—C7 | −0.1 (5) |
| O3—N2—C2—C1 | −177.9 (4) | C8—N4—C7—C6 | 0.5 (6) |
| C3—N2—C2—C1 | 1.9 (5) | N3—C6—C7—N4 | −0.6 (6) |
| O3—N2—C3—C4 | 177.1 (4) | C7—N4—C8—C5 | 0.3 (6) |
| C2—N2—C3—C4 | −2.8 (6) | N3—C5—C8—N4 | −1.1 (5) |
| C1—N1—C4—C3 | 0.4 (6) | S1—C5—C8—N4 | 176.5 (3) |
| H··· | ||||
| C2—H2 | 0.93 | 2.32 | 3.130 (5) | 146 |
| C3—H3 | 0.93 | 2.56 | 3.419 (4) | 153 |
| C7—H7 | 0.93 | 2.57 | 3.449 (3) | 157 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C2—H2 | 0.93 | 2.32 | 3.130 (5) | 146 |
| C3—H3 | 0.93 | 2.56 | 3.419 (4) | 153 |
| C7—H7 | 0.93 | 2.57 | 3.449 (3) | 157 |
Symmetry codes: (i) ; (ii) ; (iii) .