Literature DB >> 22798929

2,2'-Sulfonyl-dipyrazine 4-oxide.

Ai-Min Li1, Ya Zhang, Zhi-Wei Wang, Chong-Qing Wan.   

Abstract

In the title compound, C(8)H(6)N(4)O(3)S, the dihedral angle between the pyrazine rings is 85.04 (1)°. In the crystal, mol-ecules are arranged along the a axis and are linked by C-H⋯N hydrogen bonds and pyrazine-pyrazine π-π inter-actions [centroid-centroid distance = 3.800 (1) Å, forming an infinite chain array. The chains are connected by C-H⋯O(oxide) hydrogen bonds into layers lying parallel to the ab plane. Along the c axis, the layers are stacked and linked through C-H⋯O(sulfon-yl) inter-actions, forming a three-dimensional network.

Entities:  

Year:  2012        PMID: 22798929      PMCID: PMC3394064          DOI: 10.1107/S1600536812028607

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For metal complexes with 2,2′-sulfonyl­dipyrazine, see: Wan & Mak (2011 ▶). For crystal structures of pyridyl-based N-oxide and their metal complexes, see: Jia et al. (2008 ▶).

Experimental

Crystal data

C8H6N4O3S M = 238.23 Monoclinic, a = 7.6860 (16) Å b = 15.841 (3) Å c = 9.0624 (14) Å β = 117.813 (13)° V = 975.9 (3) Å3 Z = 4 Mo Kα radiation μ = 0.33 mm−1 T = 296 K 0.45 × 0.30 × 0.25 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2007 ▶) T min = 0.688, T max = 1.000 6606 measured reflections 2429 independent reflections 1586 reflections with I > 2σ(I) R int = 0.058

Refinement

R[F 2 > 2σ(F 2)] = 0.063 wR(F 2) = 0.203 S = 1.07 2429 reflections 145 parameters H-atom parameters constrained Δρmax = 0.85 e Å−3 Δρmin = −0.46 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: APEX2 and SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812028607/zq2171sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812028607/zq2171Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C8H6N4O3SF(000) = 488
Mr = 238.23Dx = 1.621 Mg m3Dm = 1.621 Mg m3Dm measured by not measured
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 365 reflections
a = 7.6860 (16) Åθ = 2.6–28.4°
b = 15.841 (3) ŵ = 0.33 mm1
c = 9.0624 (14) ÅT = 296 K
β = 117.813 (13)°Needle-like, colourless
V = 975.9 (3) Å30.45 × 0.30 × 0.25 mm
Z = 4
Bruker APEXII CCD area-detector diffractometer2429 independent reflections
Radiation source: fine-focus sealed tube1586 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.058
ω scansθmax = 28.4°, θmin = 2.6°
Absorption correction: multi-scan (SADABS; Bruker, 2007)h = −10→10
Tmin = 0.688, Tmax = 1.000k = −21→11
6606 measured reflectionsl = −12→11
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.063Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.203H-atom parameters constrained
S = 1.07w = 1/[σ2(Fo2) + (0.0981P)2 + 0.5688P] where P = (Fo2 + 2Fc2)/3
2429 reflections(Δ/σ)max < 0.001
145 parametersΔρmax = 0.85 e Å3
0 restraintsΔρmin = −0.46 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.50844 (11)0.33579 (5)0.25247 (12)0.0436 (3)
N10.8484 (4)0.27476 (19)0.2912 (4)0.0531 (8)
N20.8080 (4)0.12101 (18)0.4199 (4)0.0520 (8)
N30.6907 (4)0.4321 (2)0.5196 (4)0.0540 (8)
N40.7631 (6)0.5635 (2)0.3499 (6)0.0699 (10)
O10.4354 (3)0.35188 (18)0.0788 (3)0.0581 (7)
O20.3755 (4)0.31172 (17)0.3141 (4)0.0627 (8)
O30.7852 (6)0.0494 (2)0.4742 (6)0.0996 (13)
C10.6949 (4)0.25624 (19)0.3152 (4)0.0403 (7)
C20.6667 (5)0.1820 (2)0.3776 (5)0.0494 (9)
H2A0.55520.17320.39100.059*
C30.9681 (5)0.1382 (2)0.4026 (5)0.0535 (9)
H3A1.06850.09850.43510.064*
C40.9844 (5)0.2134 (2)0.3375 (6)0.0582 (10)
H4A1.09590.22290.32440.070*
C50.6391 (4)0.4281 (2)0.3598 (4)0.0416 (8)
C60.7790 (6)0.5037 (3)0.5944 (6)0.0627 (11)
H6A0.81890.51050.70760.075*
C70.8125 (6)0.5678 (3)0.5086 (7)0.0677 (13)
H7A0.87340.61670.56640.081*
C80.6737 (5)0.4914 (2)0.2717 (5)0.0561 (9)
H8A0.63550.48430.15880.067*
U11U22U33U12U13U23
S10.0286 (4)0.0384 (4)0.0661 (6)−0.0005 (3)0.0238 (4)−0.0064 (4)
N10.0336 (13)0.0392 (15)0.090 (2)−0.0016 (11)0.0314 (14)0.0025 (14)
N20.0566 (17)0.0332 (14)0.073 (2)0.0047 (13)0.0357 (16)0.0039 (14)
N30.0531 (17)0.0451 (17)0.062 (2)0.0018 (13)0.0250 (15)−0.0052 (14)
N40.069 (2)0.0405 (17)0.110 (3)−0.0067 (16)0.050 (2)−0.0055 (19)
O10.0378 (12)0.0647 (17)0.0632 (17)0.0072 (11)0.0165 (11)−0.0084 (13)
O20.0493 (14)0.0492 (15)0.109 (2)−0.0070 (12)0.0529 (15)−0.0115 (14)
O30.117 (3)0.0558 (19)0.159 (4)0.020 (2)0.092 (3)0.033 (2)
C10.0313 (14)0.0330 (15)0.0563 (19)−0.0009 (12)0.0203 (13)−0.0058 (14)
C20.0477 (18)0.0394 (17)0.074 (2)0.0008 (14)0.0395 (18)−0.0013 (16)
C30.0350 (16)0.0456 (19)0.072 (2)0.0044 (14)0.0187 (16)−0.0014 (18)
C40.0315 (16)0.0463 (19)0.099 (3)0.0001 (14)0.0318 (18)0.0007 (19)
C50.0311 (14)0.0333 (15)0.062 (2)0.0036 (12)0.0230 (14)−0.0017 (14)
C60.055 (2)0.056 (2)0.068 (3)0.0036 (18)0.0203 (19)−0.017 (2)
C70.047 (2)0.041 (2)0.115 (4)−0.0084 (16)0.038 (2)−0.024 (2)
C80.055 (2)0.045 (2)0.072 (3)0.0007 (16)0.0323 (19)−0.0001 (18)
S1—O11.425 (3)N4—C81.351 (5)
S1—O21.426 (3)C1—C21.366 (5)
S1—C51.784 (3)C2—H2A0.9300
S1—C11.790 (3)C3—C41.362 (6)
N1—C11.328 (4)C3—H3A0.9300
N1—C41.343 (4)C4—H4A0.9300
N2—O31.281 (4)C5—C81.382 (5)
N2—C31.339 (5)C6—C71.374 (7)
N2—C21.368 (4)C6—H6A0.9300
N3—C51.312 (5)C7—H7A0.9300
N3—C61.333 (5)C8—H8A0.9300
N4—C71.306 (6)
O1—S1—O2119.66 (17)N2—C3—C4120.2 (3)
O1—S1—C5106.68 (17)N2—C3—H3A119.9
O2—S1—C5109.23 (16)C4—C3—H3A119.9
O1—S1—C1108.72 (16)N1—C4—C3123.6 (3)
O2—S1—C1107.53 (17)N1—C4—H4A118.2
C5—S1—C1103.92 (14)C3—C4—H4A118.2
C1—N1—C4114.3 (3)N3—C5—C8124.2 (3)
O3—N2—C3121.5 (3)N3—C5—S1116.4 (3)
O3—N2—C2120.0 (3)C8—C5—S1119.4 (3)
C3—N2—C2118.5 (3)N3—C6—C7121.7 (4)
C5—N3—C6114.9 (4)N3—C6—H6A119.1
C7—N4—C8115.9 (4)C7—C6—H6A119.1
N1—C1—C2125.6 (3)N4—C7—C6123.4 (4)
N1—C1—S1115.7 (2)N4—C7—H7A118.3
C2—C1—S1118.6 (2)C6—C7—H7A118.3
C1—C2—N2117.7 (3)N4—C8—C5119.8 (4)
C1—C2—H2A121.1N4—C8—H8A120.1
N2—C2—H2A121.1C5—C8—H8A120.1
C4—N1—C1—C2−1.3 (5)N2—C3—C4—N11.6 (7)
C4—N1—C1—S1−179.2 (3)C6—N3—C5—C81.0 (5)
O1—S1—C1—N159.3 (3)C6—N3—C5—S1−176.7 (3)
O2—S1—C1—N1−169.8 (3)O1—S1—C5—N3169.1 (2)
C5—S1—C1—N1−54.1 (3)O2—S1—C5—N338.4 (3)
O1—S1—C1—C2−118.8 (3)C1—S1—C5—N3−76.1 (3)
O2—S1—C1—C212.1 (3)O1—S1—C5—C8−8.7 (3)
C5—S1—C1—C2127.8 (3)O2—S1—C5—C8−139.4 (3)
N1—C1—C2—N20.1 (6)C1—S1—C5—C8106.1 (3)
S1—C1—C2—N2178.0 (3)C5—N3—C6—C7−0.1 (5)
O3—N2—C2—C1−177.9 (4)C8—N4—C7—C60.5 (6)
C3—N2—C2—C11.9 (5)N3—C6—C7—N4−0.6 (6)
O3—N2—C3—C4177.1 (4)C7—N4—C8—C50.3 (6)
C2—N2—C3—C4−2.8 (6)N3—C5—C8—N4−1.1 (5)
C1—N1—C4—C30.4 (6)S1—C5—C8—N4176.5 (3)
D—H···AD—HH···AD···AD—H···A
C2—H2A···O1i0.932.323.130 (5)146
C3—H3A···O3ii0.932.563.419 (4)153
C7—H7A···N1iii0.932.573.449 (3)157
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C2—H2A⋯O1i 0.932.323.130 (5)146
C3—H3A⋯O3ii 0.932.563.419 (4)153
C7—H7A⋯N1iii 0.932.573.449 (3)157

Symmetry codes: (i) ; (ii) ; (iii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Multi-dimensional transition-metal coordination polymers of 4,4'-bipyridine-N,N'-dioxide: 1D chains and 2D sheets.

Authors:  Junhua Jia; Alexander J Blake; Neil R Champness; Peter Hubberstey; Claire Wilson; Martin Schröder
Journal:  Inorg Chem       Date:  2008-08-29       Impact factor: 5.165

3.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.