| Literature DB >> 22798877 |
Luiz C S Pinheiro, Alice M R Bernardino, Solange M S V Wardell, James L Wardell, Edward R T Tiekink.
Abstract
In the title compound, C(14)H(9)FN(2)O(2)S, the thieno[2,3-b]pyridine residue is almost planar (r.m.s. deviation = 0.0194 Å), with the carb-oxy-lic acid group [dihedral angle = 11.9 (3)°] and the benzene ring [71.1 (4)°] being twisted out of this plane to different extents. An intra-molecular N-H⋯O(carbon-yl) hydrogen bond closes an S(6) ring. Supra-molecular chains along [01-1] mediated by O-H⋯N(pyridine) hydrogen bonds feature in the crystal. A three-dimensional architecture is completed by π-π inter-actions occurring between the benzene ring and the two rings of the thieno[2,3-b]pyridine residue [centroid-centroid distances = 3.6963 (13) and 3.3812 (13) Å]. The F atom is disordered over the two meta sites in a near statistical ratio [0.545 (5):0.455 (5)].Entities:
Year: 2012 PMID: 22798877 PMCID: PMC3394012 DOI: 10.1107/S1600536812027195
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C14H9FN2O2S | |
| Orthorhombic, | Mo |
| Hall symbol: P 2c -2n | Cell parameters from 1601 reflections |
| θ = 1.0–27.5° | |
| µ = 0.29 mm−1 | |
| Blade, dark-orange | |
| 0.66 × 0.24 × 0.17 mm |
| Bruker–Nonius Roper CCD camera on κ-goniostat diffractometer | 2643 independent reflections |
| Radiation source: Bruker-Nonius FR591 rotating anode | 2376 reflections with |
| Graphite monochromator | |
| Detector resolution: 9.091 pixels mm-1 | θmax = 27.5°, θmin = 3.5° |
| φ & ω scans | |
| Absorption correction: multi-scan ( | |
| 10259 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 2643 reflections | Δρmax = 0.20 e Å−3 |
| 197 parameters | Δρmin = −0.42 e Å−3 |
| 3 restraints | Absolute structure: Flack (1983), 1181 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: 0.15 (9) |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| S1 | 0.02466 (3) | 0.49277 (6) | 0.56709 (9) | 0.02149 (14) | |
| O1 | 0.26956 (9) | 0.89190 (18) | 1.0209 (2) | 0.0246 (4) | |
| H1O | 0.2865 (16) | 0.959 (2) | 1.090 (3) | 0.037* | |
| O2 | 0.17443 (8) | 1.06688 (18) | 1.0208 (2) | 0.0254 (4) | |
| N1 | 0.15569 (10) | 0.5951 (2) | 0.7157 (2) | 0.0185 (4) | |
| N2 | 0.03616 (11) | 0.9821 (2) | 0.9068 (3) | 0.0214 (4) | |
| H2N | 0.0711 (11) | 1.041 (3) | 0.956 (3) | 0.026* | |
| C1 | 0.18990 (13) | 0.7023 (2) | 0.8094 (3) | 0.0184 (5) | |
| H1 | 0.2445 | 0.6918 | 0.8298 | 0.022* | |
| C2 | 0.15232 (12) | 0.8288 (2) | 0.8800 (2) | 0.0161 (4) | |
| C3 | 0.07089 (13) | 0.8526 (2) | 0.8490 (3) | 0.0167 (4) | |
| C4 | 0.03239 (12) | 0.7380 (2) | 0.7525 (3) | 0.0154 (4) | |
| C5 | −0.04725 (13) | 0.7259 (2) | 0.6927 (3) | 0.0190 (5) | |
| H5 | −0.0872 | 0.7977 | 0.7195 | 0.023* | |
| C6 | −0.05889 (12) | 0.6029 (2) | 0.5952 (3) | 0.0214 (5) | |
| H6 | −0.1081 | 0.5784 | 0.5464 | 0.026* | |
| C7 | 0.07779 (12) | 0.6170 (2) | 0.6923 (3) | 0.0172 (4) | |
| C8 | 0.19891 (12) | 0.9401 (3) | 0.9793 (3) | 0.0198 (5) | |
| C9 | −0.04436 (13) | 1.0256 (3) | 0.9067 (3) | 0.0197 (5) | |
| C10 | −0.06524 (14) | 1.1599 (3) | 0.8256 (3) | 0.0222 (5) | |
| H10 | −0.0279 | 1.2153 | 0.7613 | 0.027* | |
| C12 | −0.19667 (14) | 1.1360 (3) | 0.9319 (4) | 0.0341 (6) | |
| H12 | −0.2487 | 1.1741 | 0.9406 | 0.041* | |
| C14 | −0.09947 (13) | 0.9457 (3) | 1.0002 (3) | 0.0245 (5) | |
| H14 | −0.0857 | 0.8531 | 1.0554 | 0.029* | |
| C11 | −0.14136 (15) | 1.2115 (3) | 0.8400 (3) | 0.0315 (6) | 0.545 (5) |
| C13 | −0.17454 (14) | 1.0032 (3) | 1.0113 (3) | 0.0310 (6) | 0.545 (5) |
| H13 | −0.2122 | 0.9491 | 1.0761 | 0.037* | 0.545 (5) |
| F1 | −0.16627 (15) | 1.3395 (3) | 0.7761 (3) | 0.0330 (9) | 0.545 (5) |
| C11' | −0.14136 (15) | 1.2115 (3) | 0.8400 (3) | 0.0315 (6) | 0.455 (5) |
| H11 | −0.1559 | 1.3032 | 0.7838 | 0.038* | 0.455 (5) |
| C13' | −0.17454 (14) | 1.0032 (3) | 1.0113 (3) | 0.0310 (6) | 0.455 (5) |
| F1' | −0.23113 (18) | 0.9534 (4) | 1.1023 (4) | 0.0392 (12) | 0.455 (5) |
| S1 | 0.0221 (2) | 0.0178 (2) | 0.0245 (3) | −0.0018 (2) | −0.0014 (3) | −0.0059 (2) |
| O1 | 0.0187 (7) | 0.0219 (8) | 0.0332 (9) | 0.0019 (6) | −0.0077 (6) | −0.0077 (7) |
| O2 | 0.0198 (8) | 0.0194 (8) | 0.0370 (10) | −0.0001 (6) | −0.0014 (7) | −0.0092 (7) |
| N1 | 0.0181 (9) | 0.0169 (9) | 0.0205 (9) | 0.0010 (7) | 0.0011 (7) | −0.0018 (8) |
| N2 | 0.0165 (9) | 0.0178 (9) | 0.0300 (11) | 0.0007 (7) | −0.0026 (8) | −0.0070 (8) |
| C1 | 0.0175 (10) | 0.0170 (10) | 0.0208 (12) | 0.0006 (8) | −0.0013 (8) | 0.0037 (9) |
| C2 | 0.0162 (10) | 0.0149 (9) | 0.0171 (11) | −0.0008 (8) | −0.0004 (8) | −0.0001 (8) |
| C3 | 0.0198 (11) | 0.0139 (10) | 0.0163 (10) | −0.0010 (8) | 0.0016 (8) | 0.0019 (9) |
| C4 | 0.0194 (10) | 0.0147 (10) | 0.0123 (10) | 0.0002 (8) | 0.0006 (8) | 0.0015 (8) |
| C5 | 0.0172 (10) | 0.0201 (11) | 0.0197 (11) | 0.0003 (8) | −0.0007 (8) | 0.0030 (9) |
| C6 | 0.0203 (10) | 0.0213 (10) | 0.0226 (12) | −0.0011 (8) | −0.0030 (9) | −0.0002 (9) |
| C7 | 0.0204 (10) | 0.0145 (10) | 0.0165 (10) | −0.0013 (8) | 0.0003 (8) | 0.0006 (8) |
| C8 | 0.0184 (11) | 0.0211 (11) | 0.0199 (12) | −0.0006 (9) | −0.0015 (9) | −0.0005 (9) |
| C9 | 0.0178 (10) | 0.0219 (11) | 0.0194 (11) | 0.0016 (9) | −0.0033 (8) | −0.0071 (9) |
| C10 | 0.0214 (12) | 0.0197 (11) | 0.0256 (12) | −0.0001 (10) | −0.0029 (9) | −0.0040 (10) |
| C12 | 0.0170 (11) | 0.0419 (15) | 0.0434 (15) | 0.0045 (11) | −0.0050 (11) | −0.0252 (13) |
| C14 | 0.0249 (12) | 0.0257 (11) | 0.0230 (12) | −0.0059 (10) | 0.0003 (10) | −0.0021 (10) |
| C11 | 0.0325 (14) | 0.0242 (12) | 0.0379 (15) | 0.0084 (11) | −0.0111 (12) | −0.0113 (11) |
| C13 | 0.0208 (12) | 0.0425 (16) | 0.0296 (14) | −0.0062 (10) | 0.0022 (10) | −0.0162 (12) |
| F1 | 0.0327 (16) | 0.0212 (14) | 0.0452 (18) | 0.0071 (12) | −0.0064 (12) | 0.0067 (12) |
| C11' | 0.0325 (14) | 0.0242 (12) | 0.0379 (15) | 0.0084 (11) | −0.0111 (12) | −0.0113 (11) |
| C13' | 0.0208 (12) | 0.0425 (16) | 0.0296 (14) | −0.0062 (10) | 0.0022 (10) | −0.0162 (12) |
| F1' | 0.0281 (18) | 0.046 (2) | 0.044 (2) | −0.0163 (14) | 0.0099 (15) | −0.0147 (18) |
| S1—C7 | 1.731 (2) | C6—H6 | 0.9500 |
| S1—C6 | 1.733 (2) | C9—C14 | 1.388 (3) |
| O1—C8 | 1.319 (3) | C9—C10 | 1.384 (3) |
| O1—H1O | 0.852 (10) | C10—C11' | 1.380 (3) |
| O2—C8 | 1.227 (3) | C10—C11 | 1.380 (3) |
| N1—C1 | 1.332 (3) | C10—H10 | 0.9500 |
| N1—C7 | 1.356 (3) | C12—C11' | 1.365 (4) |
| N2—C3 | 1.356 (3) | C12—C11 | 1.365 (4) |
| N2—C9 | 1.426 (3) | C12—C13' | 1.373 (4) |
| N2—H2N | 0.881 (10) | C12—C13 | 1.373 (4) |
| C1—C2 | 1.394 (3) | C12—H12 | 0.9500 |
| C1—H1 | 0.9500 | C14—C13' | 1.378 (3) |
| C2—C3 | 1.427 (3) | C14—C13 | 1.378 (3) |
| C2—C8 | 1.484 (3) | C14—H14 | 0.9500 |
| C3—C4 | 1.422 (3) | C11—F1 | 1.298 (4) |
| C4—C7 | 1.394 (3) | C13—H13 | 0.9500 |
| C4—C5 | 1.445 (3) | C11'—H11 | 0.9500 |
| C5—C6 | 1.340 (3) | C13'—F1' | 1.284 (4) |
| C5—H5 | 0.9500 | ||
| C7—S1—C6 | 90.55 (10) | C11'—C10—C9 | 118.6 (2) |
| C8—O1—H1O | 104.9 (19) | C11—C10—C9 | 118.6 (2) |
| C1—N1—C7 | 114.12 (18) | C11'—C10—H10 | 120.7 |
| C3—N2—C9 | 129.99 (18) | C11—C10—H10 | 120.7 |
| C3—N2—H2N | 110.0 (17) | C9—C10—H10 | 120.7 |
| C9—N2—H2N | 119.9 (17) | C11'—C12—C11 | 0.0 (3) |
| N1—C1—C2 | 125.5 (2) | C11'—C12—C13' | 117.7 (2) |
| N1—C1—H1 | 117.3 | C11—C12—C13' | 117.7 (2) |
| C2—C1—H1 | 117.3 | C11'—C12—C13 | 117.7 (2) |
| C1—C2—C3 | 119.5 (2) | C11—C12—C13 | 117.7 (2) |
| C1—C2—C8 | 119.12 (19) | C13'—C12—C13 | 0.0 (2) |
| C3—C2—C8 | 121.30 (19) | C11'—C12—H12 | 121.1 |
| N2—C3—C4 | 124.5 (2) | C11—C12—H12 | 121.1 |
| N2—C3—C2 | 119.2 (2) | C13'—C12—H12 | 121.1 |
| C4—C3—C2 | 116.25 (18) | C13—C12—H12 | 121.1 |
| C7—C4—C3 | 117.46 (18) | C9—C14—C13' | 118.9 (2) |
| C7—C4—C5 | 110.70 (19) | C9—C14—C13 | 118.9 (2) |
| C3—C4—C5 | 131.71 (19) | C13'—C14—C13 | 0.00 (7) |
| C6—C5—C4 | 113.0 (2) | C9—C14—H14 | 120.6 |
| C6—C5—H5 | 123.5 | C13'—C14—H14 | 120.6 |
| C4—C5—H5 | 123.5 | C13—C14—H14 | 120.6 |
| C5—C6—S1 | 113.36 (17) | F1—C11—C12 | 113.5 (3) |
| C5—C6—H6 | 123.3 | F1—C11—C10 | 123.8 (3) |
| S1—C6—H6 | 123.3 | C12—C11—C10 | 122.6 (2) |
| N1—C7—C4 | 127.12 (19) | C12—C13—C14 | 122.1 (2) |
| N1—C7—S1 | 120.36 (16) | C12—C13—H13 | 118.9 |
| C4—C7—S1 | 112.43 (15) | C14—C13—H13 | 118.9 |
| O2—C8—O1 | 122.0 (2) | C12—C11'—C10 | 122.6 (2) |
| O2—C8—C2 | 123.44 (19) | C12—C11'—H11 | 118.7 |
| O1—C8—C2 | 114.57 (19) | C10—C11'—H11 | 118.7 |
| C14—C9—C10 | 120.1 (2) | F1'—C13'—C12 | 109.9 (3) |
| C14—C9—N2 | 121.3 (2) | F1'—C13'—C14 | 127.8 (3) |
| C10—C9—N2 | 118.2 (2) | C12—C13'—C14 | 122.1 (2) |
| C11'—C10—C11 | 0.0 (2) | ||
| C7—N1—C1—C2 | −0.3 (3) | C10—C9—C14—C13' | −0.5 (3) |
| N1—C1—C2—C3 | −1.9 (3) | N2—C9—C14—C13' | 172.4 (2) |
| N1—C1—C2—C8 | −178.91 (19) | C10—C9—C14—C13 | −0.5 (3) |
| C9—N2—C3—C4 | 9.1 (4) | N2—C9—C14—C13 | 172.4 (2) |
| C9—N2—C3—C2 | −173.2 (2) | C11'—C12—C11—F1 | 0 (97) |
| C1—C2—C3—N2 | −174.7 (2) | C13'—C12—C11—F1 | −176.8 (2) |
| C8—C2—C3—N2 | 2.2 (3) | C13—C12—C11—F1 | −176.8 (2) |
| C1—C2—C3—C4 | 3.1 (3) | C11'—C12—C11—C10 | 0 (100) |
| C8—C2—C3—C4 | −179.95 (19) | C13'—C12—C11—C10 | −0.4 (4) |
| N2—C3—C4—C7 | 175.4 (2) | C13—C12—C11—C10 | −0.4 (4) |
| C2—C3—C4—C7 | −2.3 (3) | C11'—C10—C11—F1 | 0 (100) |
| N2—C3—C4—C5 | 0.0 (4) | C9—C10—C11—F1 | 176.5 (3) |
| C2—C3—C4—C5 | −177.7 (2) | C11'—C10—C11—C12 | 0 (75) |
| C7—C4—C5—C6 | 0.2 (3) | C9—C10—C11—C12 | 0.4 (4) |
| C3—C4—C5—C6 | 175.9 (2) | C11'—C12—C13—C14 | −0.1 (4) |
| C4—C5—C6—S1 | −0.3 (3) | C11—C12—C13—C14 | −0.1 (4) |
| C7—S1—C6—C5 | 0.20 (18) | C13'—C12—C13—C14 | 0 (100) |
| C1—N1—C7—C4 | 1.2 (3) | C9—C14—C13—C12 | 0.6 (4) |
| C1—N1—C7—S1 | 177.51 (16) | C13'—C14—C13—C12 | 0 (100) |
| C3—C4—C7—N1 | 0.2 (3) | C11—C12—C11'—C10 | 0 (100) |
| C5—C4—C7—N1 | 176.5 (2) | C13'—C12—C11'—C10 | −0.4 (4) |
| C3—C4—C7—S1 | −176.41 (16) | C13—C12—C11'—C10 | −0.4 (4) |
| C5—C4—C7—S1 | −0.1 (2) | C11—C10—C11'—C12 | 0 (75) |
| C6—S1—C7—N1 | −176.90 (18) | C9—C10—C11'—C12 | 0.4 (4) |
| C6—S1—C7—C4 | −0.07 (17) | C11'—C12—C13'—F1' | 174.9 (3) |
| C1—C2—C8—O2 | 166.8 (2) | C11—C12—C13'—F1' | 174.9 (3) |
| C3—C2—C8—O2 | −10.2 (3) | C13—C12—C13'—F1' | 0 (59) |
| C1—C2—C8—O1 | −13.5 (3) | C11'—C12—C13'—C14 | −0.1 (4) |
| C3—C2—C8—O1 | 169.52 (19) | C11—C12—C13'—C14 | −0.1 (4) |
| C3—N2—C9—C14 | 65.4 (4) | C13—C12—C13'—C14 | 0 (100) |
| C3—N2—C9—C10 | −121.5 (3) | C9—C14—C13'—F1' | −173.6 (3) |
| C14—C9—C10—C11' | 0.0 (3) | C13—C14—C13'—F1' | 0 (79) |
| N2—C9—C10—C11' | −173.1 (2) | C9—C14—C13'—C12 | 0.6 (4) |
| C14—C9—C10—C11 | 0.0 (3) | C13—C14—C13'—C12 | 0 (100) |
| N2—C9—C10—C11 | −173.1 (2) |
| H··· | ||||
| O1—H1o···N1i | 0.86 (2) | 1.84 (2) | 2.681 (2) | 167 (3) |
| N2—H2n···O2 | 0.88 (2) | 1.85 (2) | 2.635 (2) | 147 (2) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1—H1o⋯N1i | 0.86 (2) | 1.84 (2) | 2.681 (2) | 167 (3) |
| N2—H2n⋯O2 | 0.88 (2) | 1.85 (2) | 2.635 (2) | 147 (2) |
Symmetry code: (i) .