Literature DB >> 22798869

tert-Butyl 2-sulfanylidene-2,3-dihydro-1H-imidazole-1-carboxyl-ate.

Pei-Chi Lee, Yi-Cin Guo, Bor-Hunn Huang, Ming-Jen Chen.   

Abstract

In the title mol-ecule, C(8)H(12)N(2)O(2)S, the n class="Chemical">imidazole ring forms a dihedral angle of 5.9 (2)° with the mean plane of the carboxyl-ate group. In the crystal, mol-ecules are linked by pairs of N-H⋯S hydrogen bonds, forming inversion dimers.

Entities:  

Year:  2012        PMID: 22798869      PMCID: PMC3394004          DOI: 10.1107/S1600536812027924

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

The title compound is a mercaptoimidazole derivative. For applications of n class="Chemical">mercaptoimidazole derivatives in the treatment of hyperpigmentation, see: Kasraee (2002 ▶); Kasraee et al. (2005 ▶) and for inhibiting tyrosinase, see: Liao et al. (2012 ▶). For related structures containing inter­molecular N—H⋯S hydrogen bonds, see: Krepps et al. (2001 ▶).

Experimental

Crystal data

C8H12N2O2S M = 200.26 Monoclinic, a = 6.8316 (3) Å b = 8.8893 (5) Å c = 17.5458 (15) Å β = 90.789 (6)° V = 1065.42 (12) Å3 Z = 4 Mo Kα radiation μ = 0.28 mm−1 T = 293 K 0.60 × 0.50 × 0.35 mm

Data collection

Agilent Xcalibur Sapphire3 Gemini diffractometer Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011 ▶) T min = 0.859, T max = 1.000 4722 measured reflections 2472 independent reflections 1808 reflections with I > 2σ(I) R int = 0.047

Refinement

R[F 2 > 2σ(F 2)] = 0.070 wR(F 2) = 0.213 S = 1.09 2472 reflections 118 parameters H-atom parameters constrained Δρmax = 0.37 e Å−3 Δρmin = −0.67 e Å−3 Data collection: CrysAlis PRO (Agilent, 2011 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812027924/lh5490sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812027924/lh5490Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812027924/lh5490Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C8H12N2O2S-
Mr = 200.26Dx = 1.248 Mg m3
Monoclinic, P21/cMelting point: 439 K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 6.8316 (3) ÅCell parameters from 1507 reflections
b = 8.8893 (5) Åθ = 3.0–29.2°
c = 17.5458 (15) ŵ = 0.28 mm1
β = 90.789 (6)°T = 293 K
V = 1065.42 (12) Å3Parallelpiped, colourless
Z = 40.60 × 0.50 × 0.35 mm
F(000) = 424
Agilent Xcalibur Sapphire3 Gemini diffractometer2472 independent reflections
Radiation source: fine-focus sealed tube1808 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.047
Detector resolution: 16.0690 pixels mm-1θmax = 29.2°, θmin = 3.0°
ω scansh = −9→9
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011)k = −11→11
Tmin = 0.859, Tmax = 1.000l = −23→21
4722 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.070Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.213H-atom parameters constrained
S = 1.09w = 1/[σ2(Fo2) + (0.120P)2] where P = (Fo2 + 2Fc2)/3
2472 reflections(Δ/σ)max < 0.001
118 parametersΔρmax = 0.37 e Å3
0 restraintsΔρmin = −0.67 e Å3
Experimental. Absorption correction: CrysAlisPro, Agilent Technologies, Version 1.171.35.19 (release 27-10-2011 CrysAlis171 .NET) (compiled Oct 27 2011,15:02:11) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S0.27124 (9)0.62848 (7)0.03744 (6)0.0726 (4)
O10.3738 (3)0.9165 (2)0.12448 (15)0.0823 (8)
O20.1365 (3)1.08602 (18)0.14513 (10)0.0541 (5)
N1−0.1123 (3)0.6966 (2)0.03370 (11)0.0468 (5)
H1A−0.14570.61260.01290.056*
N20.0567 (3)0.87696 (19)0.08377 (11)0.0389 (5)
C10.0732 (3)0.7337 (2)0.05224 (13)0.0415 (5)
C2−0.2421 (3)0.8086 (3)0.05181 (14)0.0508 (6)
H2A−0.37700.80610.04400.061*
C3−0.1412 (3)0.9201 (3)0.08217 (13)0.0472 (6)
H3A−0.19161.01090.09940.057*
C40.2096 (3)0.9595 (3)0.11969 (14)0.0469 (6)
C50.2572 (4)1.1899 (3)0.19323 (15)0.0587 (7)
C60.1128 (6)1.3169 (4)0.2072 (2)0.0962 (12)
H6A0.00461.27950.23600.144*
H6B0.06561.35530.15920.144*
H6C0.17691.39600.23520.144*
C70.4278 (5)1.2477 (4)0.1471 (2)0.0896 (11)
H7A0.51771.16690.13790.134*
H7B0.49351.32640.17480.134*
H7C0.38001.28650.09920.134*
C80.3180 (8)1.1119 (4)0.2653 (2)0.1084 (15)
H8A0.40831.03270.25380.163*
H8B0.20471.07020.28930.163*
H8C0.37981.18290.29920.163*
U11U22U33U12U13U23
S0.0365 (4)0.0442 (5)0.1370 (8)−0.0011 (3)0.0015 (4)−0.0349 (4)
O10.0419 (11)0.0628 (12)0.142 (2)0.0071 (9)−0.0166 (12)−0.0510 (13)
O20.0475 (10)0.0450 (9)0.0696 (11)0.0052 (8)−0.0040 (8)−0.0234 (8)
N10.0350 (10)0.0458 (11)0.0598 (11)−0.0064 (9)0.0021 (8)−0.0122 (9)
N20.0304 (9)0.0365 (9)0.0501 (10)0.0008 (7)0.0051 (7)−0.0070 (8)
C10.0348 (12)0.0363 (11)0.0535 (12)−0.0065 (9)0.0045 (9)−0.0055 (10)
C20.0310 (11)0.0640 (16)0.0574 (14)0.0018 (11)0.0019 (10)−0.0141 (12)
C30.0346 (12)0.0546 (14)0.0525 (13)0.0079 (10)0.0028 (9)−0.0103 (11)
C40.0383 (12)0.0404 (12)0.0622 (14)0.0022 (10)0.0011 (10)−0.0125 (11)
C50.0710 (18)0.0431 (13)0.0619 (15)−0.0010 (13)−0.0053 (13)−0.0206 (12)
C60.104 (3)0.0696 (19)0.115 (3)0.014 (2)−0.003 (2)−0.048 (2)
C70.090 (2)0.0680 (19)0.111 (3)−0.0256 (19)0.000 (2)−0.029 (2)
C80.167 (5)0.082 (3)0.075 (2)0.001 (2)−0.038 (2)−0.0115 (19)
S—C11.668 (2)C5—C81.496 (5)
O1—C41.186 (3)C5—C71.518 (4)
O2—C41.312 (3)C5—C61.521 (4)
O2—C51.492 (3)C6—H6A0.9600
N1—C11.345 (3)C6—H6B0.9600
N1—C21.374 (3)C6—H6C0.9600
N1—H1A0.8600C7—H7A0.9600
N2—C11.394 (3)C7—H7B0.9600
N2—C31.405 (3)C7—H7C0.9600
N2—C41.417 (3)C8—H8A0.9600
C2—C31.316 (3)C8—H8B0.9600
C2—H2A0.9300C8—H8C0.9600
C3—H3A0.9300
C4—O2—C5120.9 (2)O2—C5—C6101.3 (2)
C1—N1—C2112.04 (19)C8—C5—C6112.4 (3)
C1—N1—H1A124.0C7—C5—C6109.8 (3)
C2—N1—H1A124.0C5—C6—H6A109.5
C1—N2—C3108.91 (18)C5—C6—H6B109.5
C1—N2—C4125.90 (19)H6A—C6—H6B109.5
C3—N2—C4124.82 (19)C5—C6—H6C109.5
N1—C1—N2103.84 (18)H6A—C6—H6C109.5
N1—C1—S126.03 (17)H6B—C6—H6C109.5
N2—C1—S130.11 (16)C5—C7—H7A109.5
C3—C2—N1107.6 (2)C5—C7—H7B109.5
C3—C2—H2A126.2H7A—C7—H7B109.5
N1—C2—H2A126.2C5—C7—H7C109.5
C2—C3—N2107.6 (2)H7A—C7—H7C109.5
C2—C3—H3A126.2H7B—C7—H7C109.5
N2—C3—H3A126.2C5—C8—H8A109.5
O1—C4—O2128.0 (2)C5—C8—H8B109.5
O1—C4—N2123.7 (2)H8A—C8—H8B109.5
O2—C4—N2108.25 (19)C5—C8—H8C109.5
O2—C5—C8109.7 (2)H8A—C8—H8C109.5
O2—C5—C7109.3 (2)H8B—C8—H8C109.5
C8—C5—C7113.7 (3)
D—H···AD—HH···AD···AD—H···A
N1—H1A···Si0.862.473.324 (2)174
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1A⋯Si 0.862.473.324 (2)174

Symmetry code: (i) .

  4 in total

1.  Depigmentation of brown Guinea pig skin by topical application of methimazole.

Authors:  Behrooz Kasraee
Journal:  J Invest Dermatol       Date:  2002-01       Impact factor: 8.551

2.  Kinetics of ergothioneine inhibition of mushroom tyrosinase.

Authors:  Wayne C Liao; Wen Hong Wu; Pei-Chuan Tsai; Hui-Feng Wang; Yi-Hsin Liu; Chin-Feng Chan
Journal:  Appl Biochem Biotechnol       Date:  2011-11-10       Impact factor: 2.926

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Topical methimazole as a new treatment for postinflammatory hyperpigmentation: report of the first case.

Authors:  Behrooz Kasraee; Farhad Handjani; Amin Parhizgar; Gholamhosein R Omrani; Mohammad Reza Fallahi; Mitra Amini; Mohammad Nikbakhsh; Christian Tran; Ambros Hügin; Olivier Sorg; Jean-Hilaire Saurat
Journal:  Dermatology       Date:  2005       Impact factor: 5.366

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.