| Literature DB >> 22798851 |
Masoumeh Tabatabaee, Mahboubeh A Sharif, Michal Dušek, Michaela Pojarová.
Abstract
In the crystal structure of the title compound, C(4)H(8)N(3)O(+)·Cl(-), N-H⋯Cl hydrogen bonds link the components into chains along [010]. In addition, weak C-H⋯Cl hydrogen bonds link the chains into a two-dimensional network perpendicular to (001).Entities:
Year: 2012 PMID: 22798851 PMCID: PMC3393986 DOI: 10.1107/S1600536812027080
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C4H8N3O+·Cl− | |
| Monoclinic, | Cu |
| Hall symbol: -P 2yn | Cell parameters from 5086 reflections |
| θ = 4.4–66.9° | |
| µ = 4.51 mm−1 | |
| β = 98.369 (2)° | Plate, colourless |
| 0.57 × 0.35 × 0.15 mm | |
| Oxford Diffraction Xcalibur Atlas Gemini ultra diffractometer | 1167 independent reflections |
| Radiation source: Enhance Ultra (Cu) X-ray Source | 1158 reflections with |
| Mirror monochromator | |
| Detector resolution: 10.3784 pixels mm-1 | θmax = 67.0°, θmin = 6.4° |
| Rotation method data acquisition using ω scans | |
| Absorption correction: multi-scan ( | |
| 5373 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1167 reflections | (Δ/σ)max < 0.001 |
| 83 parameters | Δρmax = 0.28 e Å−3 |
| 0 restraints | Δρmin = −0.18 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 0.86814 (3) | 0.71590 (4) | 0.45236 (3) | 0.02046 (16) | |
| O1 | 0.43618 (13) | 0.57647 (13) | 0.32081 (12) | 0.0358 (3) | |
| N1 | 0.79940 (13) | 0.13245 (15) | 0.41934 (11) | 0.0238 (3) | |
| H1 | 0.8035 | 0.0210 | 0.4217 | 0.029* | |
| H2 | 0.8847 | 0.1923 | 0.4421 | 0.029* | |
| N2 | 0.64629 (13) | 0.38708 (14) | 0.37714 (11) | 0.0217 (3) | |
| H3 | 0.7227 | 0.4646 | 0.4031 | 0.026* | |
| C1 | 0.48933 (16) | 0.43236 (18) | 0.33205 (13) | 0.0234 (3) | |
| C2 | 0.40103 (16) | 0.26312 (17) | 0.30246 (14) | 0.0211 (3) | |
| H4 | 0.3128 | 0.2525 | 0.3529 | 0.025* | |
| H5 | 0.3606 | 0.2526 | 0.2090 | 0.025* | |
| N3 | 0.52395 (13) | 0.13463 (14) | 0.34360 (11) | 0.0189 (3) | |
| C3 | 0.66330 (16) | 0.21100 (17) | 0.38107 (13) | 0.0184 (3) | |
| C4 | 0.49578 (15) | −0.04876 (17) | 0.31667 (13) | 0.0222 (3) | |
| H6 | 0.4772 | −0.0674 | 0.2228 | 0.027* | |
| H7 | 0.4040 | −0.0858 | 0.3545 | 0.027* | |
| H8 | 0.5876 | −0.1142 | 0.3549 | 0.027* |
| Cl1 | 0.0170 (2) | 0.0197 (2) | 0.0238 (2) | −0.00117 (10) | 0.00001 (14) | −0.00029 (10) |
| O1 | 0.0308 (6) | 0.0202 (6) | 0.0562 (7) | 0.0037 (4) | 0.0058 (5) | 0.0023 (5) |
| N1 | 0.0176 (6) | 0.0207 (6) | 0.0312 (6) | −0.0022 (4) | −0.0029 (5) | −0.0001 (5) |
| N2 | 0.0203 (6) | 0.0182 (6) | 0.0262 (6) | −0.0030 (4) | 0.0019 (5) | −0.0020 (4) |
| C1 | 0.0225 (7) | 0.0205 (7) | 0.0279 (7) | 0.0009 (5) | 0.0055 (5) | 0.0006 (5) |
| C2 | 0.0162 (7) | 0.0191 (6) | 0.0276 (7) | 0.0028 (5) | 0.0021 (5) | 0.0011 (6) |
| N3 | 0.0166 (5) | 0.0163 (6) | 0.0233 (6) | −0.0002 (4) | 0.0007 (4) | 0.0001 (4) |
| C3 | 0.0203 (7) | 0.0188 (7) | 0.0163 (6) | −0.0019 (5) | 0.0032 (5) | −0.0007 (4) |
| C4 | 0.0195 (7) | 0.0175 (6) | 0.0285 (7) | −0.0017 (5) | 0.0002 (5) | −0.0008 (5) |
| O1—C1 | 1.1976 (18) | C2—N3 | 1.4533 (16) |
| N1—C3 | 1.3094 (18) | C2—H4 | 0.9700 |
| N1—H1 | 0.8600 | C2—H5 | 0.9700 |
| N1—H2 | 0.8600 | N3—C3 | 1.3237 (18) |
| N2—C3 | 1.3647 (17) | N3—C4 | 1.4530 (17) |
| N2—C1 | 1.3856 (17) | C4—H6 | 0.9600 |
| N2—H3 | 0.8921 | C4—H7 | 0.9600 |
| C1—C2 | 1.5118 (19) | C4—H8 | 0.9600 |
| C3—N1—H1 | 120.0 | H4—C2—H5 | 109.2 |
| C3—N1—H2 | 120.0 | C3—N3—C4 | 127.01 (11) |
| H1—N1—H2 | 120.0 | C3—N3—C2 | 110.53 (11) |
| C3—N2—C1 | 110.62 (11) | C4—N3—C2 | 121.15 (10) |
| C3—N2—H3 | 126.1 | N1—C3—N3 | 126.05 (12) |
| C1—N2—H3 | 123.3 | N1—C3—N2 | 123.57 (12) |
| O1—C1—N2 | 126.44 (13) | N3—C3—N2 | 110.36 (11) |
| O1—C1—C2 | 127.82 (12) | N3—C4—H6 | 109.5 |
| N2—C1—C2 | 105.73 (11) | N3—C4—H7 | 109.5 |
| N3—C2—C1 | 102.59 (11) | H6—C4—H7 | 109.5 |
| N3—C2—H4 | 111.2 | N3—C4—H8 | 109.5 |
| C1—C2—H4 | 111.2 | H6—C4—H8 | 109.5 |
| N3—C2—H5 | 111.2 | H7—C4—H8 | 109.5 |
| C1—C2—H5 | 111.2 |
| H··· | ||||
| N1—H1···Cl1i | 0.86 | 2.42 | 3.2714 (12) | 169 |
| N1—H2···Cl1ii | 0.86 | 2.32 | 3.1506 (12) | 163 |
| N2—H3···Cl1 | 0.89 | 2.31 | 3.1808 (11) | 165 |
| C2—H4···Cl1iii | 0.97 | 2.69 | 3.6271 (14) | 162 |
| C4—H8···Cl1i | 0.96 | 2.77 | 3.7241 (13) | 175 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1⋯Cl1i | 0.86 | 2.42 | 3.2714 (12) | 169 |
| N1—H2⋯Cl1ii | 0.86 | 2.32 | 3.1506 (12) | 163 |
| N2—H3⋯Cl1 | 0.89 | 2.31 | 3.1808 (11) | 165 |
| C2—H4⋯Cl1iii | 0.97 | 2.69 | 3.6271 (14) | 162 |
| C4—H8⋯Cl1i | 0.96 | 2.77 | 3.7241 (13) | 175 |
Symmetry codes: (i) ; (ii) ; (iii) .