Literature DB >> 22798812

(11R,12S)-16-Amino-tetra-cyclo-[6.6.2.0(2,7).0(9,14)]hexa-deca-2(7),3,5,9(14),10,12-hexaen-15-ol.

Alaa A-M Abdel-Aziz, Adel S El-Azab, Magda A El-Sherbeny, Seik Weng Ng, Edward R T Tiekink.   

Abstract

In the title compound, C(16)H(15)NO, the dihedral angle between the outer benzene rings is 51.88 (6)°, and each of the central six-membered rings has a boat conformation. The hy-droxy and amino groups are syn, and the hy-droxy H atom forms an intra-molecular O-H⋯N hydrogen bond. In the crystal, mol-ecules assemble via C-H⋯O and C-H⋯π inter-actions, consolidating a three-dimensional architecture.

Entities:  

Year:  2012        PMID: 22798812      PMCID: PMC3393947          DOI: 10.1107/S1600536812026542

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For chiral ligands in asymmetric catalytic reactions, see: Yamakuchi et al. (2005 ▶). For the synthesis of the title compound, see: Hashimoto et al. (1998 ▶); Matsunaga et al. (2005 ▶). For a related structure, see: Abdel-Aziz et al. (2012 ▶).

Experimental

Crystal data

C16H15NO M = 237.29 Monoclinic, a = 8.6224 (2) Å b = 7.1140 (1) Å c = 10.0210 (2) Å β = 106.707 (2)° V = 588.74 (2) Å3 Z = 2 Cu Kα radiation μ = 0.65 mm−1 T = 100 K 0.40 × 0.30 × 0.20 mm

Data collection

Agilent SuperNova Dual diffractometer with an Atlas detector Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012 ▶) T min = 0.590, T max = 1.000 4044 measured reflections 2375 independent reflections 2357 reflections with I > 2σ(I) R int = 0.011

Refinement

R[F 2 > 2σ(F 2)] = 0.029 wR(F 2) = 0.077 S = 1.06 2375 reflections 175 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.20 e Å−3 Δρmin = −0.17 e Å−3 Absolute structure: Flack (1983 ▶), 1060 Friedel pairs Flack parameter: 0.0 (2) Data collection: CrysAlis PRO (Agilent, 2012 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812026542/pv2558sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812026542/pv2558Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H15NOF(000) = 252
Mr = 237.29Dx = 1.339 Mg m3
Monoclinic, P21Cu Kα radiation, λ = 1.54184 Å
Hall symbol: P 2ybCell parameters from 3312 reflections
a = 8.6224 (2) Åθ = 4.6–76.4°
b = 7.1140 (1) ŵ = 0.65 mm1
c = 10.0210 (2) ÅT = 100 K
β = 106.707 (2)°Prism, colourless
V = 588.74 (2) Å30.40 × 0.30 × 0.20 mm
Z = 2
Agilent SuperNova Dual diffractometer with an Atlas detector2375 independent reflections
Radiation source: SuperNova (Cu) X-ray Source2357 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.011
Detector resolution: 10.4041 pixels mm-1θmax = 76.6°, θmin = 4.6°
ω scanh = −10→10
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012)k = −8→8
Tmin = 0.590, Tmax = 1.000l = −12→7
4044 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.029H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.077w = 1/[σ2(Fo2) + (0.0469P)2 + 0.1178P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max < 0.001
2375 reflectionsΔρmax = 0.20 e Å3
175 parametersΔρmin = −0.17 e Å3
1 restraintAbsolute structure: Flack (1983), 1060 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.0 (2)
xyzUiso*/Ueq
O10.49638 (11)0.50034 (15)0.64491 (10)0.0241 (2)
N10.71887 (14)0.29044 (18)0.80145 (14)0.0240 (3)
C10.96576 (14)0.71372 (17)0.75647 (12)0.0142 (2)
C21.12329 (14)0.73301 (18)0.74782 (12)0.0158 (2)
H21.20810.65750.80380.019*
C31.15501 (14)0.86460 (19)0.65592 (12)0.0160 (2)
H31.26200.87770.64880.019*
C41.03187 (15)0.97688 (19)0.57454 (12)0.0168 (2)
H41.05571.06840.51420.020*
C50.87298 (15)0.95569 (18)0.58111 (12)0.0160 (2)
H50.78821.03060.52440.019*
C60.84091 (15)0.82368 (17)0.67170 (12)0.0144 (3)
C70.67531 (14)0.77274 (18)0.68480 (12)0.0151 (2)
H70.58830.85550.62630.018*
C80.65031 (15)0.56368 (19)0.63948 (13)0.0180 (3)
H80.65550.55280.54140.022*
C90.78995 (15)0.43912 (18)0.73668 (13)0.0181 (3)
H90.85140.37870.67730.022*
C100.90784 (14)0.57079 (17)0.84339 (13)0.0150 (3)
H100.99980.49970.90700.018*
C110.80732 (14)0.67230 (17)0.92286 (12)0.0141 (2)
C120.82683 (14)0.66176 (18)1.06492 (13)0.0161 (2)
H120.90930.58481.12250.019*
C130.72441 (15)0.76507 (18)1.12256 (12)0.0181 (3)
H130.73770.75911.21990.022*
C140.60311 (15)0.87664 (18)1.03815 (13)0.0178 (3)
H140.53460.94791.07820.021*
C150.58155 (14)0.88446 (17)0.89508 (13)0.0159 (2)
H150.49780.95970.83740.019*
C160.68295 (14)0.78190 (18)0.83726 (12)0.0145 (2)
H1o0.526 (3)0.384 (4)0.696 (2)0.048 (6)*
H1n0.720 (3)0.316 (4)0.891 (3)0.060 (7)*
H2n0.772 (3)0.179 (4)0.803 (2)0.043 (5)*
U11U22U33U12U13U23
O10.0167 (4)0.0288 (6)0.0270 (5)−0.0084 (4)0.0067 (4)−0.0030 (4)
N10.0266 (6)0.0152 (5)0.0352 (6)−0.0026 (5)0.0170 (5)−0.0005 (5)
C10.0170 (5)0.0130 (6)0.0131 (5)−0.0007 (5)0.0051 (4)−0.0011 (4)
C20.0156 (5)0.0163 (6)0.0153 (5)0.0009 (4)0.0043 (4)−0.0019 (4)
C30.0143 (5)0.0184 (6)0.0161 (5)−0.0018 (5)0.0059 (4)−0.0029 (5)
C40.0200 (6)0.0178 (6)0.0141 (5)−0.0025 (5)0.0072 (4)0.0004 (5)
C50.0178 (6)0.0161 (6)0.0135 (5)0.0023 (5)0.0036 (4)0.0000 (4)
C60.0143 (5)0.0156 (6)0.0141 (5)−0.0006 (4)0.0051 (4)−0.0023 (4)
C70.0127 (5)0.0183 (6)0.0146 (5)0.0013 (5)0.0042 (4)0.0007 (5)
C80.0167 (6)0.0211 (7)0.0179 (6)−0.0030 (5)0.0075 (5)−0.0039 (5)
C90.0201 (6)0.0146 (6)0.0229 (6)−0.0029 (5)0.0114 (5)−0.0029 (5)
C100.0148 (5)0.0141 (6)0.0171 (6)0.0006 (4)0.0064 (4)0.0017 (4)
C110.0149 (5)0.0120 (6)0.0162 (6)−0.0023 (4)0.0059 (4)0.0001 (4)
C120.0168 (5)0.0137 (6)0.0177 (6)−0.0019 (5)0.0051 (4)0.0020 (4)
C130.0222 (6)0.0191 (6)0.0152 (5)−0.0057 (5)0.0088 (5)−0.0011 (5)
C140.0181 (6)0.0158 (6)0.0230 (6)−0.0034 (5)0.0113 (5)−0.0040 (5)
C150.0132 (5)0.0146 (6)0.0206 (6)−0.0005 (5)0.0058 (4)0.0002 (5)
C160.0142 (5)0.0144 (6)0.0164 (5)−0.0027 (5)0.0065 (4)−0.0003 (5)
O1—C81.4174 (15)C7—C81.5518 (17)
O1—H1o0.96 (3)C7—H71.0000
N1—C91.4644 (17)C8—C91.5841 (18)
N1—H1n0.91 (3)C8—H81.0000
N1—H2n0.91 (3)C9—C101.5586 (17)
C1—C21.3924 (16)C9—H91.0000
C1—C61.4024 (16)C10—C111.5177 (16)
C1—C101.5140 (16)C10—H101.0000
C2—C31.3944 (18)C11—C121.3867 (17)
C2—H20.9500C11—C161.4017 (16)
C3—C41.3902 (17)C12—C131.3954 (18)
C3—H30.9500C12—H120.9500
C4—C51.3985 (17)C13—C141.3895 (18)
C4—H40.9500C13—H130.9500
C5—C61.3881 (17)C14—C151.3928 (18)
C5—H50.9500C14—H140.9500
C6—C71.5150 (16)C15—C161.3869 (17)
C7—C161.5116 (15)C15—H150.9500
C8—O1—H1o100.4 (13)C7—C8—H8108.7
C9—N1—H1n113.9 (17)C9—C8—H8108.7
C9—N1—H2n110.8 (14)N1—C9—C10113.79 (11)
H1n—N1—H2n107 (2)N1—C9—C8109.61 (10)
C2—C1—C6120.00 (11)C10—C9—C8108.43 (10)
C2—C1—C10126.23 (11)N1—C9—H9108.3
C6—C1—C10113.60 (10)C10—C9—H9108.3
C3—C2—C1119.17 (11)C8—C9—H9108.3
C3—C2—H2120.4C1—C10—C11108.35 (10)
C1—C2—H2120.4C1—C10—C9105.47 (10)
C2—C3—C4120.76 (11)C11—C10—C9106.73 (10)
C2—C3—H3119.6C1—C10—H10112.0
C4—C3—H3119.6C11—C10—H10112.0
C3—C4—C5120.25 (11)C9—C10—H10112.0
C3—C4—H4119.9C12—C11—C16120.26 (11)
C5—C4—H4119.9C12—C11—C10126.43 (11)
C6—C5—C4119.06 (11)C16—C11—C10113.29 (10)
C6—C5—H5120.5C11—C12—C13119.47 (11)
C4—C5—H5120.5C11—C12—H12120.3
C5—C6—C1120.73 (11)C13—C12—H12120.3
C5—C6—C7126.05 (11)C14—C13—C12120.27 (11)
C1—C6—C7113.11 (10)C14—C13—H13119.9
C16—C7—C6108.00 (9)C12—C13—H13119.9
C16—C7—C8107.41 (10)C13—C14—C15120.25 (11)
C6—C7—C8105.01 (10)C13—C14—H14119.9
C16—C7—H7112.0C15—C14—H14119.9
C6—C7—H7112.0C16—C15—C14119.70 (11)
C8—C7—H7112.0C16—C15—H15120.2
O1—C8—C7110.26 (10)C14—C15—H15120.2
O1—C8—C9110.68 (11)C15—C16—C11120.02 (11)
C7—C8—C9109.82 (10)C15—C16—C7126.54 (11)
O1—C8—H8108.7C11—C16—C7113.44 (10)
C6—C1—C2—C31.06 (17)C2—C1—C10—C9−113.84 (13)
C10—C1—C2—C3176.01 (12)C6—C1—C10—C961.39 (12)
C1—C2—C3—C40.59 (18)N1—C9—C10—C1−179.42 (10)
C2—C3—C4—C5−1.72 (19)C8—C9—C10—C1−57.17 (11)
C3—C4—C5—C61.17 (18)N1—C9—C10—C11−64.31 (13)
C4—C5—C6—C10.48 (17)C8—C9—C10—C1157.94 (12)
C4—C5—C6—C7−175.42 (11)C1—C10—C11—C12−128.68 (13)
C2—C1—C6—C5−1.61 (17)C9—C10—C11—C12118.16 (13)
C10—C1—C6—C5−177.17 (11)C1—C10—C11—C1652.62 (13)
C2—C1—C6—C7174.79 (11)C9—C10—C11—C16−60.54 (13)
C10—C1—C6—C7−0.77 (14)C16—C11—C12—C13−1.70 (18)
C5—C6—C7—C16−129.68 (13)C10—C11—C12—C13179.68 (12)
C1—C6—C7—C1654.15 (13)C11—C12—C13—C140.43 (18)
C5—C6—C7—C8115.94 (13)C12—C13—C14—C150.78 (18)
C1—C6—C7—C8−60.23 (12)C13—C14—C15—C16−0.72 (18)
C16—C7—C8—O166.32 (12)C14—C15—C16—C11−0.55 (17)
C6—C7—C8—O1−178.88 (10)C14—C15—C16—C7179.28 (12)
C16—C7—C8—C9−55.90 (12)C12—C11—C16—C151.77 (17)
C6—C7—C8—C958.89 (12)C10—C11—C16—C15−179.44 (11)
O1—C8—C9—N11.54 (14)C12—C11—C16—C7−178.08 (11)
C7—C8—C9—N1123.51 (11)C10—C11—C16—C70.71 (14)
O1—C8—C9—C10−123.22 (11)C6—C7—C16—C15126.02 (13)
C7—C8—C9—C10−1.25 (13)C8—C7—C16—C15−121.19 (13)
C2—C1—C10—C11132.18 (12)C6—C7—C16—C11−54.14 (14)
C6—C1—C10—C11−52.59 (13)C8—C7—C16—C1158.65 (12)
D—H···AD—HH···AD···AD—H···A
O1—H1o···N10.96 (3)1.82 (2)2.577 (2)133 (2)
C5—H5···O1i0.952.563.3506 (16)141
C4—H4···Cg1ii0.952.613.5064 (14)158
C10—H10···Cg2iii1.002.953.9212 (14)164
C12—H12···Cg1iii0.952.673.5159 (14)149
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 and Cg2 are the centroids of the C1–C6 and C11–C16 benzene rings, respectively.

D—H⋯A D—HH⋯A DA D—H⋯A
O1—H1o⋯N10.96 (3)1.82 (2)2.577 (2)133 (2)
C5—H5⋯O1i 0.952.563.3506 (16)141
C4—H4⋯Cg1ii 0.952.613.5064 (14)158
C10—H10⋯Cg2iii 1.002.953.9212 (14)164
C12—H12⋯Cg1iii 0.952.673.5159 (14)149

Symmetry codes: (i) ; (ii) ; (iii) .

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