| Literature DB >> 22798810 |
Adel S El-Azab, Alaa A-M Abdel-Aziz, Ibrahim A Al-Swaidan, Seik Weng Ng, Edward R T Tiekink.
Abstract
In the title compound, C(10)H(7)N(3)OS(2), the 16 non-H atoms are almost planar (r.m.s. deviation = 0.037 Å) and the S-bound methyl group is syn to the ketone O atom. In the crystal, centrosymmetrically related mol-ecules are connected by pairs of C-H⋯O inter-actions between the ketone O and methyl H atoms. The dimeric aggregates are connected into a linear supra-molecular chain along the b axis via π-π inter-actions occurring between the five-membered and benzene rings [centroid-centroid distance = 3.6123 (9) Å]. The chains assemble into layers in the bc plane via S⋯S inter-actions involving the endocyclic S atoms [S⋯S = 3.4607 (6) and 3.4792 (6) Å].Entities:
Year: 2012 PMID: 22798810 PMCID: PMC3393945 DOI: 10.1107/S1600536812026189
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H7N3OS2 | |
| Monoclinic, | Cu |
| Hall symbol: -P 2ybc | Cell parameters from 2166 reflections |
| θ = 3.7–76.5° | |
| µ = 4.53 mm−1 | |
| β = 91.453 (3)° | Prism, colourless |
| 0.30 × 0.10 × 0.03 mm | |
| Agilent SuperNova Dual diffractometer with an Atlas detector | 2110 independent reflections |
| Radiation source: SuperNova (Cu) X-ray Source | 1937 reflections with |
| Mirror monochromator | |
| Detector resolution: 10.4041 pixels mm-1 | θmax = 76.7°, θmin = 3.7° |
| ω scan | |
| Absorption correction: multi-scan ( | |
| 3781 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2110 reflections | (Δ/σ)max = 0.001 |
| 145 parameters | Δρmax = 0.36 e Å−3 |
| 0 restraints | Δρmin = −0.27 e Å−3 |
| S1 | 0.90968 (3) | 0.75129 (8) | 0.46619 (2) | 0.01702 (12) | |
| S2 | 0.76245 (3) | 1.12015 (8) | 0.55613 (2) | 0.01660 (12) | |
| N1 | 0.90012 (11) | 0.3645 (3) | 0.35873 (8) | 0.0160 (3) | |
| N2 | 0.72981 (11) | 0.5607 (3) | 0.40394 (7) | 0.0145 (3) | |
| N3 | 0.68915 (11) | 0.7516 (3) | 0.45394 (7) | 0.0160 (3) | |
| O1 | 0.55197 (9) | 0.4218 (3) | 0.36566 (7) | 0.0217 (3) | |
| C1 | 0.65417 (13) | 0.4007 (3) | 0.36022 (9) | 0.0159 (3) | |
| C2 | 0.71312 (13) | 0.2152 (3) | 0.31034 (9) | 0.0153 (3) | |
| C3 | 0.64945 (13) | 0.0467 (4) | 0.26154 (9) | 0.0183 (3) | |
| H3 | 0.5691 | 0.0533 | 0.2616 | 0.022* | |
| C4 | 0.70332 (14) | −0.1282 (4) | 0.21351 (9) | 0.0196 (3) | |
| H4 | 0.6602 | −0.2429 | 0.1806 | 0.024* | |
| C5 | 0.82196 (14) | −0.1368 (3) | 0.21325 (9) | 0.0192 (3) | |
| H5 | 0.8589 | −0.2560 | 0.1796 | 0.023* | |
| C6 | 0.88539 (13) | 0.0261 (3) | 0.26135 (9) | 0.0179 (3) | |
| H6 | 0.9657 | 0.0173 | 0.2609 | 0.021* | |
| C7 | 0.83228 (13) | 0.2050 (3) | 0.31091 (9) | 0.0149 (3) | |
| C8 | 0.84595 (12) | 0.5289 (3) | 0.40102 (8) | 0.0149 (3) | |
| C9 | 0.77423 (13) | 0.8644 (3) | 0.48930 (9) | 0.0152 (3) | |
| C10 | 0.61018 (14) | 1.1556 (4) | 0.55743 (10) | 0.0211 (3) | |
| H10A | 0.5903 | 1.2965 | 0.5938 | 0.032* | |
| H10B | 0.5762 | 0.9854 | 0.5730 | 0.032* | |
| H10C | 0.5815 | 1.2041 | 0.5062 | 0.032* |
| S1 | 0.01263 (19) | 0.0180 (2) | 0.0204 (2) | −0.00013 (13) | −0.00028 (14) | −0.00389 (14) |
| S2 | 0.0170 (2) | 0.0176 (2) | 0.0151 (2) | 0.00105 (14) | −0.00022 (14) | −0.00248 (14) |
| N1 | 0.0136 (6) | 0.0176 (7) | 0.0167 (6) | 0.0001 (5) | 0.0003 (5) | −0.0019 (5) |
| N2 | 0.0124 (6) | 0.0179 (7) | 0.0133 (6) | 0.0031 (5) | 0.0007 (5) | −0.0011 (5) |
| N3 | 0.0161 (6) | 0.0180 (7) | 0.0139 (6) | 0.0031 (5) | 0.0001 (5) | −0.0018 (5) |
| O1 | 0.0118 (5) | 0.0294 (7) | 0.0239 (6) | 0.0024 (5) | −0.0007 (4) | −0.0067 (5) |
| C1 | 0.0148 (7) | 0.0191 (7) | 0.0138 (7) | 0.0014 (6) | −0.0011 (6) | −0.0006 (6) |
| C2 | 0.0151 (7) | 0.0176 (7) | 0.0131 (7) | 0.0011 (6) | −0.0001 (5) | 0.0006 (6) |
| C3 | 0.0146 (7) | 0.0227 (8) | 0.0176 (7) | 0.0013 (7) | −0.0018 (6) | −0.0009 (6) |
| C4 | 0.0190 (8) | 0.0219 (8) | 0.0177 (8) | 0.0007 (6) | −0.0041 (6) | −0.0031 (6) |
| C5 | 0.0204 (8) | 0.0207 (8) | 0.0166 (7) | 0.0037 (6) | 0.0012 (6) | −0.0032 (6) |
| C6 | 0.0135 (7) | 0.0206 (8) | 0.0195 (7) | 0.0022 (6) | 0.0013 (6) | −0.0013 (6) |
| C7 | 0.0149 (7) | 0.0160 (7) | 0.0139 (7) | −0.0004 (6) | 0.0001 (5) | 0.0017 (6) |
| C8 | 0.0127 (7) | 0.0159 (7) | 0.0160 (7) | −0.0008 (6) | −0.0005 (5) | 0.0023 (6) |
| C9 | 0.0155 (7) | 0.0160 (7) | 0.0141 (7) | 0.0019 (6) | 0.0005 (5) | 0.0014 (6) |
| C10 | 0.0178 (7) | 0.0261 (9) | 0.0194 (8) | 0.0048 (7) | 0.0015 (6) | −0.0032 (7) |
| S1—C8 | 1.7473 (16) | C2—C7 | 1.409 (2) |
| S1—C9 | 1.7542 (16) | C3—C4 | 1.378 (2) |
| S2—C9 | 1.7378 (16) | C3—H3 | 0.9500 |
| S2—C10 | 1.8091 (17) | C4—C5 | 1.403 (2) |
| N1—C8 | 1.286 (2) | C4—H4 | 0.9500 |
| N1—C7 | 1.393 (2) | C5—C6 | 1.378 (2) |
| N2—C8 | 1.3840 (18) | C5—H5 | 0.9500 |
| N2—N3 | 1.3866 (18) | C6—C7 | 1.403 (2) |
| N2—C1 | 1.409 (2) | C6—H6 | 0.9500 |
| N3—C9 | 1.296 (2) | C10—H10A | 0.9800 |
| O1—C1 | 1.2186 (19) | C10—H10B | 0.9800 |
| C1—C2 | 1.461 (2) | C10—H10C | 0.9800 |
| C2—C3 | 1.403 (2) | ||
| C8—S1—C9 | 88.48 (7) | C6—C5—H5 | 119.7 |
| C9—S2—C10 | 100.19 (8) | C4—C5—H5 | 119.7 |
| C8—N1—C7 | 114.96 (13) | C5—C6—C7 | 120.47 (14) |
| C8—N2—N3 | 117.51 (13) | C5—C6—H6 | 119.8 |
| C8—N2—C1 | 122.09 (13) | C7—C6—H6 | 119.8 |
| N3—N2—C1 | 120.37 (12) | N1—C7—C6 | 118.30 (14) |
| C9—N3—N2 | 108.78 (13) | N1—C7—C2 | 122.93 (14) |
| O1—C1—N2 | 121.69 (14) | C6—C7—C2 | 118.77 (14) |
| O1—C1—C2 | 126.16 (15) | N1—C8—N2 | 127.10 (14) |
| N2—C1—C2 | 112.15 (13) | N1—C8—S1 | 124.55 (12) |
| C3—C2—C7 | 120.23 (14) | N2—C8—S1 | 108.35 (11) |
| C3—C2—C1 | 119.08 (14) | N3—C9—S2 | 124.42 (12) |
| C7—C2—C1 | 120.69 (14) | N3—C9—S1 | 116.88 (12) |
| C4—C3—C2 | 120.06 (15) | S2—C9—S1 | 118.69 (9) |
| C4—C3—H3 | 120.0 | S2—C10—H10A | 109.5 |
| C2—C3—H3 | 120.0 | S2—C10—H10B | 109.5 |
| C3—C4—C5 | 119.90 (15) | H10A—C10—H10B | 109.5 |
| C3—C4—H4 | 120.0 | S2—C10—H10C | 109.5 |
| C5—C4—H4 | 120.0 | H10A—C10—H10C | 109.5 |
| C6—C5—C4 | 120.56 (15) | H10B—C10—H10C | 109.5 |
| C8—N2—N3—C9 | −0.24 (19) | C3—C2—C7—N1 | −179.16 (15) |
| C1—N2—N3—C9 | 177.60 (13) | C1—C2—C7—N1 | 0.9 (2) |
| C8—N2—C1—O1 | 176.66 (15) | C3—C2—C7—C6 | 0.7 (2) |
| N3—N2—C1—O1 | −1.1 (2) | C1—C2—C7—C6 | −179.20 (15) |
| C8—N2—C1—C2 | −3.1 (2) | C7—N1—C8—N2 | 0.4 (2) |
| N3—N2—C1—C2 | 179.13 (13) | C7—N1—C8—S1 | 179.87 (11) |
| O1—C1—C2—C3 | 1.9 (3) | N3—N2—C8—N1 | −179.87 (15) |
| N2—C1—C2—C3 | −178.30 (14) | C1—N2—C8—N1 | 2.3 (2) |
| O1—C1—C2—C7 | −178.17 (16) | N3—N2—C8—S1 | 0.61 (17) |
| N2—C1—C2—C7 | 1.6 (2) | C1—N2—C8—S1 | −177.18 (12) |
| C7—C2—C3—C4 | −0.5 (2) | C9—S1—C8—N1 | 179.88 (15) |
| C1—C2—C3—C4 | 179.44 (15) | C9—S1—C8—N2 | −0.59 (11) |
| C2—C3—C4—C5 | −0.3 (3) | N2—N3—C9—S2 | 178.77 (11) |
| C3—C4—C5—C6 | 0.8 (3) | N2—N3—C9—S1 | −0.27 (17) |
| C4—C5—C6—C7 | −0.5 (3) | C10—S2—C9—N3 | 0.76 (16) |
| C8—N1—C7—C6 | 178.13 (15) | C10—S2—C9—S1 | 179.79 (10) |
| C8—N1—C7—C2 | −2.0 (2) | C8—S1—C9—N3 | 0.53 (13) |
| C5—C6—C7—N1 | 179.67 (15) | C8—S1—C9—S2 | −178.57 (10) |
| C5—C6—C7—C2 | −0.2 (2) |
| H··· | ||||
| C10—H10 | 0.98 | 2.32 | 3.170 (2) | 145 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C10—H10 | 0.98 | 2.32 | 3.170 (2) | 145 |
Symmetry code: (i) .