Literature DB >> 22798810

2-Methyl-sulfanyl-9H-1,3,4-thia-diazolo[2,3-b]quinazolin-9-one.

Adel S El-Azab, Alaa A-M Abdel-Aziz, Ibrahim A Al-Swaidan, Seik Weng Ng, Edward R T Tiekink.   

Abstract

In the title compound, C(10)H(7)N(3)OS(2), the 16 non-H atoms are almost planar (r.m.s. deviation = 0.037 Å) and the S-bound methyl group is syn to the ketone O atom. In the crystal, centrosymmetrically related mol-ecules are connected by pairs of C-H⋯O inter-actions between the ketone O and methyl H atoms. The dimeric aggregates are connected into a linear supra-molecular chain along the b axis via π-π inter-actions occurring between the five-membered and benzene rings [centroid-centroid distance = 3.6123 (9) Å]. The chains assemble into layers in the bc plane via S⋯S inter-actions involving the endocyclic S atoms [S⋯S = 3.4607 (6) and 3.4792 (6) Å].

Entities:  

Year:  2012        PMID: 22798810      PMCID: PMC3393945          DOI: 10.1107/S1600536812026189

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For recent studies on the synthesis and biological properties of quinazoline-4(3H)-one derivatives, see: El-Azab & ElTahir (2012 ▶); El-Azab et al. (2011 ▶). For the synthesis and anti-microbial activity of the title compound, see: El-Azab (2007 ▶).

Experimental

Crystal data

C10H7N3OS2 M = 249.31 Monoclinic, a = 11.8193 (4) Å b = 4.9841 (2) Å c = 17.4985 (6) Å β = 91.453 (3)° V = 1030.48 (6) Å3 Z = 4 Cu Kα radiation μ = 4.53 mm−1 T = 100 K 0.30 × 0.10 × 0.03 mm

Data collection

Agilent SuperNova Dual diffractometer with an Atlas detector Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012 ▶) T min = 0.344, T max = 0.876 3781 measured reflections 2110 independent reflections 1937 reflections with I > 2σ(I) R int = 0.018

Refinement

R[F 2 > 2σ(F 2)] = 0.029 wR(F 2) = 0.082 S = 1.09 2110 reflections 145 parameters H-atom parameters constrained Δρmax = 0.36 e Å−3 Δρmin = −0.27 e Å−3 Data collection: CrysAlis PRO (Agilent, 2012 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812026189/hb6843sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812026189/hb6843Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812026189/hb6843Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H7N3OS2F(000) = 512
Mr = 249.31Dx = 1.607 Mg m3
Monoclinic, P21/cCu Kα radiation, λ = 1.54184 Å
Hall symbol: -P 2ybcCell parameters from 2166 reflections
a = 11.8193 (4) Åθ = 3.7–76.5°
b = 4.9841 (2) ŵ = 4.53 mm1
c = 17.4985 (6) ÅT = 100 K
β = 91.453 (3)°Prism, colourless
V = 1030.48 (6) Å30.30 × 0.10 × 0.03 mm
Z = 4
Agilent SuperNova Dual diffractometer with an Atlas detector2110 independent reflections
Radiation source: SuperNova (Cu) X-ray Source1937 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.018
Detector resolution: 10.4041 pixels mm-1θmax = 76.7°, θmin = 3.7°
ω scanh = −12→14
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012)k = −5→6
Tmin = 0.344, Tmax = 0.876l = −15→21
3781 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.029Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.082H-atom parameters constrained
S = 1.09w = 1/[σ2(Fo2) + (0.0457P)2 + 0.3686P] where P = (Fo2 + 2Fc2)/3
2110 reflections(Δ/σ)max = 0.001
145 parametersΔρmax = 0.36 e Å3
0 restraintsΔρmin = −0.27 e Å3
xyzUiso*/Ueq
S10.90968 (3)0.75129 (8)0.46619 (2)0.01702 (12)
S20.76245 (3)1.12015 (8)0.55613 (2)0.01660 (12)
N10.90012 (11)0.3645 (3)0.35873 (8)0.0160 (3)
N20.72981 (11)0.5607 (3)0.40394 (7)0.0145 (3)
N30.68915 (11)0.7516 (3)0.45394 (7)0.0160 (3)
O10.55197 (9)0.4218 (3)0.36566 (7)0.0217 (3)
C10.65417 (13)0.4007 (3)0.36022 (9)0.0159 (3)
C20.71312 (13)0.2152 (3)0.31034 (9)0.0153 (3)
C30.64945 (13)0.0467 (4)0.26154 (9)0.0183 (3)
H30.56910.05330.26160.022*
C40.70332 (14)−0.1282 (4)0.21351 (9)0.0196 (3)
H40.6602−0.24290.18060.024*
C50.82196 (14)−0.1368 (3)0.21325 (9)0.0192 (3)
H50.8589−0.25600.17960.023*
C60.88539 (13)0.0261 (3)0.26135 (9)0.0179 (3)
H60.96570.01730.26090.021*
C70.83228 (13)0.2050 (3)0.31091 (9)0.0149 (3)
C80.84595 (12)0.5289 (3)0.40102 (8)0.0149 (3)
C90.77423 (13)0.8644 (3)0.48930 (9)0.0152 (3)
C100.61018 (14)1.1556 (4)0.55743 (10)0.0211 (3)
H10A0.59031.29650.59380.032*
H10B0.57620.98540.57300.032*
H10C0.58151.20410.50620.032*
U11U22U33U12U13U23
S10.01263 (19)0.0180 (2)0.0204 (2)−0.00013 (13)−0.00028 (14)−0.00389 (14)
S20.0170 (2)0.0176 (2)0.0151 (2)0.00105 (14)−0.00022 (14)−0.00248 (14)
N10.0136 (6)0.0176 (7)0.0167 (6)0.0001 (5)0.0003 (5)−0.0019 (5)
N20.0124 (6)0.0179 (7)0.0133 (6)0.0031 (5)0.0007 (5)−0.0011 (5)
N30.0161 (6)0.0180 (7)0.0139 (6)0.0031 (5)0.0001 (5)−0.0018 (5)
O10.0118 (5)0.0294 (7)0.0239 (6)0.0024 (5)−0.0007 (4)−0.0067 (5)
C10.0148 (7)0.0191 (7)0.0138 (7)0.0014 (6)−0.0011 (6)−0.0006 (6)
C20.0151 (7)0.0176 (7)0.0131 (7)0.0011 (6)−0.0001 (5)0.0006 (6)
C30.0146 (7)0.0227 (8)0.0176 (7)0.0013 (7)−0.0018 (6)−0.0009 (6)
C40.0190 (8)0.0219 (8)0.0177 (8)0.0007 (6)−0.0041 (6)−0.0031 (6)
C50.0204 (8)0.0207 (8)0.0166 (7)0.0037 (6)0.0012 (6)−0.0032 (6)
C60.0135 (7)0.0206 (8)0.0195 (7)0.0022 (6)0.0013 (6)−0.0013 (6)
C70.0149 (7)0.0160 (7)0.0139 (7)−0.0004 (6)0.0001 (5)0.0017 (6)
C80.0127 (7)0.0159 (7)0.0160 (7)−0.0008 (6)−0.0005 (5)0.0023 (6)
C90.0155 (7)0.0160 (7)0.0141 (7)0.0019 (6)0.0005 (5)0.0014 (6)
C100.0178 (7)0.0261 (9)0.0194 (8)0.0048 (7)0.0015 (6)−0.0032 (7)
S1—C81.7473 (16)C2—C71.409 (2)
S1—C91.7542 (16)C3—C41.378 (2)
S2—C91.7378 (16)C3—H30.9500
S2—C101.8091 (17)C4—C51.403 (2)
N1—C81.286 (2)C4—H40.9500
N1—C71.393 (2)C5—C61.378 (2)
N2—C81.3840 (18)C5—H50.9500
N2—N31.3866 (18)C6—C71.403 (2)
N2—C11.409 (2)C6—H60.9500
N3—C91.296 (2)C10—H10A0.9800
O1—C11.2186 (19)C10—H10B0.9800
C1—C21.461 (2)C10—H10C0.9800
C2—C31.403 (2)
C8—S1—C988.48 (7)C6—C5—H5119.7
C9—S2—C10100.19 (8)C4—C5—H5119.7
C8—N1—C7114.96 (13)C5—C6—C7120.47 (14)
C8—N2—N3117.51 (13)C5—C6—H6119.8
C8—N2—C1122.09 (13)C7—C6—H6119.8
N3—N2—C1120.37 (12)N1—C7—C6118.30 (14)
C9—N3—N2108.78 (13)N1—C7—C2122.93 (14)
O1—C1—N2121.69 (14)C6—C7—C2118.77 (14)
O1—C1—C2126.16 (15)N1—C8—N2127.10 (14)
N2—C1—C2112.15 (13)N1—C8—S1124.55 (12)
C3—C2—C7120.23 (14)N2—C8—S1108.35 (11)
C3—C2—C1119.08 (14)N3—C9—S2124.42 (12)
C7—C2—C1120.69 (14)N3—C9—S1116.88 (12)
C4—C3—C2120.06 (15)S2—C9—S1118.69 (9)
C4—C3—H3120.0S2—C10—H10A109.5
C2—C3—H3120.0S2—C10—H10B109.5
C3—C4—C5119.90 (15)H10A—C10—H10B109.5
C3—C4—H4120.0S2—C10—H10C109.5
C5—C4—H4120.0H10A—C10—H10C109.5
C6—C5—C4120.56 (15)H10B—C10—H10C109.5
C8—N2—N3—C9−0.24 (19)C3—C2—C7—N1−179.16 (15)
C1—N2—N3—C9177.60 (13)C1—C2—C7—N10.9 (2)
C8—N2—C1—O1176.66 (15)C3—C2—C7—C60.7 (2)
N3—N2—C1—O1−1.1 (2)C1—C2—C7—C6−179.20 (15)
C8—N2—C1—C2−3.1 (2)C7—N1—C8—N20.4 (2)
N3—N2—C1—C2179.13 (13)C7—N1—C8—S1179.87 (11)
O1—C1—C2—C31.9 (3)N3—N2—C8—N1−179.87 (15)
N2—C1—C2—C3−178.30 (14)C1—N2—C8—N12.3 (2)
O1—C1—C2—C7−178.17 (16)N3—N2—C8—S10.61 (17)
N2—C1—C2—C71.6 (2)C1—N2—C8—S1−177.18 (12)
C7—C2—C3—C4−0.5 (2)C9—S1—C8—N1179.88 (15)
C1—C2—C3—C4179.44 (15)C9—S1—C8—N2−0.59 (11)
C2—C3—C4—C5−0.3 (3)N2—N3—C9—S2178.77 (11)
C3—C4—C5—C60.8 (3)N2—N3—C9—S1−0.27 (17)
C4—C5—C6—C7−0.5 (3)C10—S2—C9—N30.76 (16)
C8—N1—C7—C6178.13 (15)C10—S2—C9—S1179.79 (10)
C8—N1—C7—C2−2.0 (2)C8—S1—C9—N30.53 (13)
C5—C6—C7—N1179.67 (15)C8—S1—C9—S2−178.57 (10)
C5—C6—C7—C2−0.2 (2)
D—H···AD—HH···AD···AD—H···A
C10—H10A···O1i0.982.323.170 (2)145
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C10—H10A⋯O1i 0.982.323.170 (2)145

Symmetry code: (i) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Design and synthesis of novel 7-aminoquinazoline derivatives: antitumor and anticonvulsant activities.

Authors:  Adel S El-Azab; Kamal E H Eltahir
Journal:  Bioorg Med Chem Lett       Date:  2012-01-28       Impact factor: 2.823

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.