| Literature DB >> 22798799 |
Manman Zhang1, Li Li, Fugen Yuan, Hui Qian.
Abstract
The title compound, C(34)H(54)N(2)O(2)·0.25H(2)O, the organic mol-ecule, a potential tetra-dentate ligand with a bulky phenolic donor, has overall mirror symmetry. A partially occupied water mol-ecule of solvation is present in the lattice. The six-membered 1,3-diazinane ring displays a chair conformation. An intra-molecular O-H⋯N hydrogen bond ocurs. In the crystal, mol-ecules are linked by O-H⋯O inter-actions.Entities:
Year: 2012 PMID: 22798799 PMCID: PMC3393934 DOI: 10.1107/S1600536812026505
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C34H54N2O2·0.25H2O | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ac 2n | Cell parameters from 9920 reflections |
| θ = 2.6–27.6° | |
| µ = 0.07 mm−1 | |
| Prism, colorless | |
| 0.33 × 0.24 × 0.16 mm |
| Bruker SMART APEXII CCD diffractometer | 3411 reflections with |
| Radiation source: fine-focus sealed tube | |
| Graphite monochromator | θmax = 27.6°, θmin = 1.6° |
| phi and ω scans | |
| 29196 measured reflections | |
| 3908 independent reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.038 | |
| 3908 reflections | Δρmax = 0.38 e Å−3 |
| 180 parameters | Δρmin = −0.31 e Å−3 |
| 1 restraint | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0034 (7) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| N1 | 0.24037 (12) | 0.78185 (2) | 0.40084 (10) | 0.0226 (2) | |
| O1 | 0.50878 (10) | 0.81077 (2) | 0.47464 (9) | 0.0290 (2) | |
| H1 | 0.4572 | 0.7956 | 0.4369 | 0.044* | |
| O2 | 0.7322 (8) | 0.7500 | 0.5233 (7) | 0.0500 (15)* | 0.25 |
| H2 | 0.6880 | 0.7299 | 0.5133 | 0.075* | 0.25 |
| C1 | 0.44073 (13) | 0.84373 (3) | 0.46035 (11) | 0.0218 (2) | |
| C2 | 0.30352 (13) | 0.84657 (3) | 0.38874 (11) | 0.0224 (2) | |
| C3 | 0.23273 (13) | 0.87966 (3) | 0.37546 (12) | 0.0228 (2) | |
| H3A | 0.1408 | 0.8812 | 0.3297 | 0.027* | |
| C4 | 0.29645 (13) | 0.91060 (3) | 0.42917 (11) | 0.0215 (2) | |
| C5 | 0.43413 (13) | 0.90681 (3) | 0.49783 (11) | 0.0220 (2) | |
| H5A | 0.4783 | 0.9272 | 0.5335 | 0.026* | |
| C6 | 0.50974 (13) | 0.87414 (3) | 0.51622 (11) | 0.0211 (2) | |
| C7 | 0.21487 (13) | 0.94668 (3) | 0.41266 (12) | 0.0248 (3) | |
| C8 | 0.05775 (16) | 0.94463 (4) | 0.47962 (16) | 0.0397 (3) | |
| H8A | 0.0056 | 0.9671 | 0.4697 | 0.060* | |
| H8B | 0.0712 | 0.9395 | 0.5713 | 0.060* | |
| H8C | −0.0019 | 0.9260 | 0.4397 | 0.060* | |
| C9 | 0.19124 (19) | 0.95464 (4) | 0.26617 (16) | 0.0429 (4) | |
| H9A | 0.2890 | 0.9560 | 0.2232 | 0.064* | |
| H9B | 0.1386 | 0.9770 | 0.2565 | 0.064* | |
| H9C | 0.1314 | 0.9359 | 0.2272 | 0.064* | |
| C10 | 0.30511 (17) | 0.97759 (4) | 0.4729 (2) | 0.0484 (4) | |
| H10A | 0.4038 | 0.9792 | 0.4317 | 0.073* | |
| H10B | 0.3180 | 0.9735 | 0.5654 | 0.073* | |
| H10C | 0.2503 | 0.9995 | 0.4596 | 0.073* | |
| C11 | 0.66220 (13) | 0.87198 (3) | 0.59218 (11) | 0.0240 (3) | |
| C12 | 0.71429 (15) | 0.90887 (4) | 0.64144 (14) | 0.0334 (3) | |
| H12A | 0.6375 | 0.9187 | 0.6985 | 0.050* | |
| H12B | 0.7290 | 0.9245 | 0.5678 | 0.050* | |
| H12C | 0.8089 | 0.9065 | 0.6887 | 0.050* | |
| C13 | 0.64494 (16) | 0.84776 (4) | 0.71373 (13) | 0.0365 (3) | |
| H13A | 0.5661 | 0.8571 | 0.7698 | 0.055* | |
| H13B | 0.7401 | 0.8470 | 0.7609 | 0.055* | |
| H13C | 0.6178 | 0.8241 | 0.6862 | 0.055* | |
| C14 | 0.78871 (14) | 0.85726 (4) | 0.50186 (12) | 0.0299 (3) | |
| H14A | 0.7992 | 0.8725 | 0.4265 | 0.045* | |
| H14B | 0.7619 | 0.8336 | 0.4738 | 0.045* | |
| H14C | 0.8840 | 0.8565 | 0.5489 | 0.045* | |
| C15 | 0.23842 (15) | 0.81429 (3) | 0.31813 (12) | 0.0261 (3) | |
| H15A | 0.1338 | 0.8193 | 0.2919 | 0.031* | |
| H15B | 0.2976 | 0.8099 | 0.2391 | 0.031* | |
| C16 | 0.2173 (2) | 0.7500 | 0.32086 (16) | 0.0228 (3) | |
| H16A | 0.2891 | 0.7500 | 0.2481 | 0.027* | |
| H16B | 0.1143 | 0.7500 | 0.2851 | 0.027* | |
| C17 | 0.12559 (16) | 0.78340 (3) | 0.50660 (13) | 0.0310 (3) | |
| H17A | 0.0237 | 0.7850 | 0.4690 | 0.037* | |
| H17B | 0.1426 | 0.8045 | 0.5601 | 0.037* | |
| C18 | 0.1380 (3) | 0.7500 | 0.59142 (19) | 0.0369 (4) | |
| H18A | 0.2354 | 0.7500 | 0.6373 | 0.044* | |
| H18B | 0.0569 | 0.7500 | 0.6565 | 0.044* |
| N1 | 0.0289 (5) | 0.0148 (4) | 0.0242 (5) | −0.0005 (3) | −0.0016 (4) | −0.0007 (3) |
| O1 | 0.0287 (4) | 0.0196 (4) | 0.0387 (5) | 0.0034 (3) | −0.0068 (4) | 0.0017 (3) |
| C1 | 0.0231 (5) | 0.0188 (5) | 0.0234 (5) | 0.0019 (4) | 0.0001 (4) | 0.0021 (4) |
| C2 | 0.0261 (6) | 0.0176 (5) | 0.0235 (5) | −0.0020 (4) | −0.0028 (4) | 0.0005 (4) |
| C3 | 0.0220 (5) | 0.0199 (5) | 0.0265 (6) | −0.0006 (4) | −0.0044 (4) | 0.0013 (4) |
| C4 | 0.0203 (5) | 0.0189 (5) | 0.0252 (6) | −0.0002 (4) | 0.0010 (4) | −0.0002 (4) |
| C5 | 0.0211 (5) | 0.0205 (5) | 0.0242 (5) | −0.0030 (4) | 0.0009 (4) | −0.0028 (4) |
| C6 | 0.0195 (5) | 0.0244 (5) | 0.0195 (5) | −0.0009 (4) | 0.0000 (4) | 0.0006 (4) |
| C7 | 0.0225 (5) | 0.0167 (5) | 0.0352 (6) | 0.0008 (4) | −0.0001 (5) | −0.0008 (4) |
| C8 | 0.0311 (7) | 0.0340 (7) | 0.0540 (9) | 0.0073 (5) | 0.0090 (6) | 0.0041 (6) |
| C9 | 0.0556 (9) | 0.0304 (6) | 0.0429 (8) | 0.0106 (6) | 0.0013 (7) | 0.0108 (6) |
| C10 | 0.0369 (8) | 0.0217 (6) | 0.0866 (13) | 0.0031 (5) | −0.0134 (8) | −0.0140 (7) |
| C11 | 0.0202 (5) | 0.0308 (6) | 0.0210 (5) | 0.0006 (4) | −0.0017 (4) | 0.0005 (4) |
| C12 | 0.0252 (6) | 0.0406 (7) | 0.0345 (7) | −0.0015 (5) | −0.0065 (5) | −0.0092 (6) |
| C13 | 0.0314 (7) | 0.0525 (8) | 0.0257 (6) | −0.0013 (6) | −0.0032 (5) | 0.0105 (6) |
| C14 | 0.0218 (6) | 0.0394 (7) | 0.0285 (6) | 0.0023 (5) | −0.0008 (5) | −0.0026 (5) |
| C15 | 0.0343 (6) | 0.0166 (5) | 0.0274 (6) | −0.0020 (4) | −0.0081 (5) | 0.0016 (4) |
| C16 | 0.0291 (8) | 0.0159 (7) | 0.0233 (8) | 0.000 | −0.0030 (6) | 0.000 |
| C17 | 0.0370 (7) | 0.0227 (6) | 0.0333 (7) | 0.0019 (5) | 0.0059 (5) | −0.0046 (5) |
| C18 | 0.0523 (12) | 0.0298 (9) | 0.0286 (9) | 0.000 | 0.0117 (9) | 0.000 |
| N1—C16 | 1.4575 (13) | C10—H10A | 0.9600 |
| N1—C17 | 1.4719 (16) | C10—H10B | 0.9600 |
| N1—C15 | 1.4777 (14) | C10—H10C | 0.9600 |
| O1—C1 | 1.3770 (13) | C11—C14 | 1.5390 (17) |
| O1—H1 | 0.8200 | C11—C12 | 1.5379 (17) |
| O2—H2 | 0.8500 | C11—C13 | 1.5414 (17) |
| C1—C2 | 1.4062 (16) | C12—H12A | 0.9600 |
| C1—C6 | 1.4078 (15) | C12—H12B | 0.9600 |
| C2—C3 | 1.3909 (15) | C12—H12C | 0.9600 |
| C2—C15 | 1.5162 (15) | C13—H13A | 0.9600 |
| C3—C4 | 1.3962 (15) | C13—H13B | 0.9600 |
| C3—H3A | 0.9300 | C13—H13C | 0.9600 |
| C4—C5 | 1.3975 (16) | C14—H14A | 0.9600 |
| C4—C7 | 1.5359 (15) | C14—H14B | 0.9600 |
| C5—C6 | 1.4023 (16) | C14—H14C | 0.9600 |
| C5—H5A | 0.9300 | C15—H15A | 0.9700 |
| C6—C11 | 1.5414 (15) | C15—H15B | 0.9700 |
| C7—C10 | 1.5283 (17) | C16—N1i | 1.4575 (13) |
| C7—C9 | 1.535 (2) | C16—H16A | 0.9700 |
| C7—C8 | 1.5335 (18) | C16—H16B | 0.9700 |
| C8—H8A | 0.9600 | C17—C18 | 1.5231 (16) |
| C8—H8B | 0.9600 | C17—H17A | 0.9700 |
| C8—H8C | 0.9600 | C17—H17B | 0.9700 |
| C9—H9A | 0.9600 | C18—C17i | 1.5231 (16) |
| C9—H9B | 0.9600 | C18—H18A | 0.9700 |
| C9—H9C | 0.9600 | C18—H18B | 0.9700 |
| C16—N1—C17 | 110.29 (10) | C14—C11—C13 | 109.83 (10) |
| C16—N1—C15 | 110.62 (9) | C12—C11—C13 | 107.17 (10) |
| C17—N1—C15 | 112.13 (9) | C14—C11—C6 | 109.79 (9) |
| C1—O1—H1 | 109.5 | C12—C11—C6 | 111.83 (10) |
| O1—C1—C2 | 119.33 (10) | C13—C11—C6 | 110.44 (10) |
| O1—C1—C6 | 119.81 (10) | C11—C12—H12A | 109.5 |
| C2—C1—C6 | 120.85 (10) | C11—C12—H12B | 109.5 |
| C3—C2—C1 | 119.74 (10) | H12A—C12—H12B | 109.5 |
| C3—C2—C15 | 119.80 (10) | C11—C12—H12C | 109.5 |
| C1—C2—C15 | 120.32 (10) | H12A—C12—H12C | 109.5 |
| C2—C3—C4 | 121.57 (10) | H12B—C12—H12C | 109.5 |
| C2—C3—H3A | 119.2 | C11—C13—H13A | 109.5 |
| C4—C3—H3A | 119.2 | C11—C13—H13B | 109.5 |
| C3—C4—C5 | 117.02 (10) | H13A—C13—H13B | 109.5 |
| C3—C4—C7 | 120.11 (10) | C11—C13—H13C | 109.5 |
| C5—C4—C7 | 122.87 (10) | H13A—C13—H13C | 109.5 |
| C4—C5—C6 | 124.06 (10) | H13B—C13—H13C | 109.5 |
| C4—C5—H5A | 118.0 | C11—C14—H14A | 109.5 |
| C6—C5—H5A | 118.0 | C11—C14—H14B | 109.5 |
| C5—C6—C1 | 116.73 (10) | H14A—C14—H14B | 109.5 |
| C5—C6—C11 | 121.28 (10) | C11—C14—H14C | 109.5 |
| C1—C6—C11 | 121.99 (10) | H14A—C14—H14C | 109.5 |
| C10—C7—C9 | 108.21 (12) | H14B—C14—H14C | 109.5 |
| C10—C7—C8 | 108.69 (11) | N1—C15—C2 | 112.34 (9) |
| C9—C7—C8 | 108.76 (11) | N1—C15—H15A | 109.1 |
| C10—C7—C4 | 112.50 (10) | C2—C15—H15A | 109.1 |
| C9—C7—C4 | 109.83 (10) | N1—C15—H15B | 109.1 |
| C8—C7—C4 | 108.78 (10) | C2—C15—H15B | 109.1 |
| C7—C8—H8A | 109.5 | H15A—C15—H15B | 107.9 |
| C7—C8—H8B | 109.5 | N1—C16—N1i | 109.75 (13) |
| H8A—C8—H8B | 109.5 | N1—C16—H16A | 109.7 |
| C7—C8—H8C | 109.5 | N1i—C16—H16A | 109.7 |
| H8A—C8—H8C | 109.5 | N1—C16—H16B | 109.7 |
| H8B—C8—H8C | 109.5 | N1i—C16—H16B | 109.7 |
| C7—C9—H9A | 109.5 | H16A—C16—H16B | 108.2 |
| C7—C9—H9B | 109.5 | N1—C17—C18 | 109.51 (11) |
| H9A—C9—H9B | 109.5 | N1—C17—H17A | 109.8 |
| C7—C9—H9C | 109.5 | C18—C17—H17A | 109.8 |
| H9A—C9—H9C | 109.5 | N1—C17—H17B | 109.8 |
| H9B—C9—H9C | 109.5 | C18—C17—H17B | 109.8 |
| C7—C10—H10A | 109.5 | H17A—C17—H17B | 108.2 |
| C7—C10—H10B | 109.5 | C17i—C18—C17 | 110.30 (15) |
| H10A—C10—H10B | 109.5 | C17i—C18—H18A | 109.6 |
| C7—C10—H10C | 109.5 | C17—C18—H18A | 109.6 |
| H10A—C10—H10C | 109.5 | C17i—C18—H18B | 109.6 |
| H10B—C10—H10C | 109.5 | C17—C18—H18B | 109.6 |
| C14—C11—C12 | 107.71 (10) | H18A—C18—H18B | 108.1 |
| H··· | ||||
| O1—H1···N1 | 0.82 | 2.00 | 2.6880 (13) | 142 |
| O2—H2···O1i | 0.85 | 2.22 | 3.036 (5) | 161 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1—H1⋯N1 | 0.82 | 2.00 | 2.6880 (13) | 142 |
| O2—H2⋯O1i | 0.85 | 2.22 | 3.036 (5) | 161 |
Symmetry code: (i) .