Literature DB >> 22798794

4-Amino-2-hy-droxy-benzohydrazide.

Hadi Kargar, Reza Kia, Muhammad Nawaz Tahir.   

Abstract

The asymmetric unit of the title compound, C(7)H(9)N(3)O(2), comprises two crystallographically independent mol-ecules (A and B). In each mol-ecule there is an intra-molecular O-H⋯O hydrogen bond making an S(6) ring motif. In the crystal, a pair of N-H⋯N hydrogen bonds link the two mol-ecules (A and B) into a dimer with an R(2) (2)(6) ring motif. The B mol-ecules are linked via pairs of N-H⋯O hydrogen bonds, forming inversion dimers with an R(2) (2)(10) ring motif. The mol-ecules are further linked via other N-H⋯O hydrogen bonds, forming undulating two-dimensional networks lying parallel to the bc plane. These networks are finally linked via N-H⋯O hydrogen bonds, forming a three-dimensional structure.

Entities:  

Year:  2012        PMID: 22798794      PMCID: PMC3393929          DOI: 10.1107/S1600536812026190

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to Schiff bases derived from benzohydrazide, see: Xu (2012 ▶); Bakir & Green (2002 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For standard bond lengths, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C7H9N3O2 M = 167.17 Monoclinic, a = 5.6424 (3) Å b = 18.3221 (12) Å c = 14.7164 (9) Å β = 94.087 (3)° V = 1517.52 (16) Å3 Z = 8 Mo Kα radiation μ = 0.11 mm−1 T = 291 K 0.32 × 0.16 × 0.14 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.965, T max = 0.985 12530 measured reflections 3366 independent reflections 2092 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.133 S = 1.01 3366 reflections 219 parameters H-atom parameters constrained Δρmax = 0.21 e Å−3 Δρmin = −0.21 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶)’; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812026190/su2448sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812026190/su2448Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812026190/su2448Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C7H9N3O2F(000) = 704
Mr = 167.17Dx = 1.463 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2540 reflections
a = 5.6424 (3) Åθ = 2.5–27.4°
b = 18.3221 (12) ŵ = 0.11 mm1
c = 14.7164 (9) ÅT = 291 K
β = 94.087 (3)°Needle, colourless
V = 1517.52 (16) Å30.32 × 0.16 × 0.14 mm
Z = 8
Bruker SMART APEXII CCD area-detector diffractometer3366 independent reflections
Radiation source: fine-focus sealed tube2092 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.027
φ and ω scansθmax = 27.2°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −7→7
Tmin = 0.965, Tmax = 0.985k = −23→23
12530 measured reflectionsl = −18→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.045Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.133H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.0609P)2 + 0.2376P] where P = (Fo2 + 2Fc2)/3
3366 reflections(Δ/σ)max < 0.001
219 parametersΔρmax = 0.21 e Å3
0 restraintsΔρmin = −0.21 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.1395 (3)0.65395 (10)0.73974 (11)0.0391 (4)
C20.2934 (3)0.68029 (9)0.81762 (11)0.0364 (4)
C30.4957 (3)0.72159 (9)0.80167 (11)0.0369 (4)
C40.6503 (3)0.74457 (10)0.87301 (11)0.0398 (4)
H40.78470.77120.86080.048*
C50.6085 (3)0.72868 (9)0.96218 (11)0.0386 (4)
C60.4041 (3)0.68873 (10)0.97971 (11)0.0430 (4)
H60.37180.67811.03940.052*
C70.2524 (3)0.66546 (10)0.90872 (11)0.0414 (4)
H70.11790.63900.92130.050*
C80.3586 (3)0.46432 (10)0.83167 (11)0.0411 (4)
C90.2091 (3)0.44085 (9)0.75099 (11)0.0363 (4)
C100.0013 (3)0.40061 (10)0.76272 (11)0.0402 (4)
C11−0.1501 (3)0.38160 (10)0.68907 (12)0.0442 (5)
H11−0.28930.35640.69850.053*
C12−0.0989 (3)0.39927 (10)0.60123 (12)0.0428 (4)
C130.1119 (3)0.43658 (10)0.58807 (11)0.0415 (4)
H130.15200.44750.52940.050*
C140.2596 (3)0.45715 (10)0.66168 (11)0.0405 (4)
H140.39780.48270.65180.049*
N10.7591 (3)0.75402 (10)1.03293 (10)0.0567 (5)
H1A0.88060.78001.02180.068*
H1B0.73170.74381.08830.068*
N2−0.0459 (3)0.61215 (8)0.75474 (10)0.0445 (4)
H2−0.09350.59750.81510.053*
N3−0.2002 (3)0.58528 (9)0.68260 (10)0.0486 (4)
H1N3−0.11410.55890.63680.058*
H2N3−0.25030.62310.64080.058*
N4−0.2532 (3)0.38142 (11)0.52828 (11)0.0686 (6)
H4A−0.38350.35900.53690.082*
H4B−0.21950.39270.47400.082*
N50.5410 (3)0.50862 (9)0.81992 (9)0.0468 (4)
H50.58800.52390.75950.056*
N60.6986 (3)0.53248 (10)0.89273 (9)0.0519 (4)
H1N60.61260.54920.93810.062*
H2N60.76040.48920.92200.062*
O10.5463 (2)0.74076 (8)0.71656 (8)0.0523 (4)
H10.44100.72600.67990.078*
O20.1813 (2)0.66956 (8)0.65963 (8)0.0560 (4)
O3−0.0582 (2)0.37996 (8)0.84652 (8)0.0566 (4)
H30.04830.39160.88460.085*
O40.3139 (3)0.44440 (8)0.90981 (8)0.0619 (4)
U11U22U33U12U13U23
C10.0420 (10)0.0386 (10)0.0370 (10)0.0033 (8)0.0057 (8)−0.0009 (8)
C20.0371 (9)0.0374 (10)0.0347 (9)0.0031 (8)0.0033 (7)−0.0009 (7)
C30.0398 (10)0.0382 (10)0.0335 (9)0.0054 (8)0.0086 (7)0.0005 (7)
C40.0356 (9)0.0423 (10)0.0420 (10)−0.0012 (8)0.0076 (8)−0.0012 (8)
C50.0393 (10)0.0406 (10)0.0358 (9)0.0065 (8)0.0012 (7)−0.0061 (8)
C60.0486 (11)0.0490 (11)0.0319 (9)0.0020 (9)0.0069 (8)0.0009 (8)
C70.0402 (10)0.0440 (10)0.0409 (10)−0.0023 (8)0.0085 (8)0.0026 (8)
C80.0438 (10)0.0449 (11)0.0349 (9)0.0046 (9)0.0038 (8)0.0002 (8)
C90.0392 (9)0.0370 (10)0.0328 (9)0.0022 (8)0.0043 (7)0.0016 (7)
C100.0474 (10)0.0355 (10)0.0389 (10)0.0015 (8)0.0111 (8)0.0040 (8)
C110.0444 (11)0.0407 (11)0.0485 (11)−0.0104 (8)0.0091 (9)−0.0032 (8)
C120.0458 (11)0.0386 (10)0.0437 (10)−0.0017 (9)0.0018 (8)−0.0082 (8)
C130.0454 (10)0.0464 (11)0.0333 (9)−0.0019 (9)0.0068 (8)0.0013 (8)
C140.0385 (10)0.0448 (10)0.0383 (10)−0.0038 (8)0.0040 (8)0.0028 (8)
N10.0553 (10)0.0755 (12)0.0390 (9)−0.0105 (9)0.0000 (7)−0.0084 (8)
N20.0430 (9)0.0514 (10)0.0387 (8)−0.0073 (7)0.0012 (7)−0.0050 (7)
N30.0503 (9)0.0544 (10)0.0401 (8)−0.0057 (8)−0.0036 (7)−0.0062 (7)
N40.0645 (11)0.0898 (14)0.0508 (10)−0.0334 (10)0.0001 (9)−0.0121 (9)
N50.0470 (9)0.0578 (10)0.0352 (8)−0.0085 (8)−0.0004 (7)−0.0034 (7)
N60.0514 (9)0.0648 (11)0.0386 (8)−0.0061 (8)−0.0030 (7)−0.0081 (7)
O10.0553 (9)0.0687 (9)0.0332 (7)−0.0120 (7)0.0064 (6)0.0044 (6)
O20.0613 (9)0.0737 (10)0.0329 (7)−0.0143 (7)0.0018 (6)0.0007 (6)
O30.0632 (9)0.0657 (9)0.0424 (7)−0.0113 (8)0.0128 (6)0.0108 (7)
O40.0692 (10)0.0838 (11)0.0324 (7)−0.0133 (8)0.0014 (6)0.0080 (7)
C1—O21.252 (2)C11—C121.383 (2)
C1—N21.328 (2)C11—H110.9300
C1—C21.469 (2)C12—N41.373 (2)
C2—C71.403 (2)C12—C131.397 (2)
C2—C31.403 (2)C13—C141.372 (2)
C3—O11.3506 (19)C13—H130.9300
C3—C41.382 (2)C14—H140.9300
C4—C51.381 (2)N1—H1A0.8600
C4—H40.9300N1—H1B0.8600
C5—N11.377 (2)N2—N31.4125 (19)
C5—C61.406 (2)N2—H20.9837
C6—C71.371 (2)N3—H1N30.9851
C6—H60.9300N3—H2N30.9568
C7—H70.9300N4—H4A0.8600
C8—O41.249 (2)N4—H4B0.8600
C8—N51.331 (2)N5—N61.4123 (19)
C8—C91.471 (2)N5—H50.9858
C9—C141.397 (2)N6—H1N60.9064
C9—C101.406 (2)N6—H2N60.9561
C10—O31.355 (2)O1—H10.8200
C10—C111.376 (2)O3—H30.8200
O2—C1—N2119.45 (16)C10—C11—H11119.4
O2—C1—C2121.28 (16)C12—C11—H11119.4
N2—C1—C2119.26 (15)N4—C12—C11120.81 (17)
C7—C2—C3117.12 (15)N4—C12—C13120.45 (17)
C7—C2—C1123.58 (16)C11—C12—C13118.74 (16)
C3—C2—C1119.29 (15)C14—C13—C12120.03 (16)
O1—C3—C4117.51 (16)C14—C13—H13120.0
O1—C3—C2121.56 (15)C12—C13—H13120.0
C4—C3—C2120.93 (15)C13—C14—C9122.08 (17)
C5—C4—C3121.11 (17)C13—C14—H14119.0
C5—C4—H4119.4C9—C14—H14119.0
C3—C4—H4119.4C5—N1—H1A120.0
N1—C5—C4120.65 (17)C5—N1—H1B120.0
N1—C5—C6120.48 (16)H1A—N1—H1B120.0
C4—C5—C6118.83 (15)C1—N2—N3121.79 (14)
C7—C6—C5119.88 (16)C1—N2—H2125.2
C7—C6—H6120.1N3—N2—H2113.0
C5—C6—H6120.1N2—N3—H1N3112.2
C6—C7—C2122.10 (17)N2—N3—H2N3111.6
C6—C7—H7118.9H1N3—N3—H2N393.0
C2—C7—H7118.9C12—N4—H4A120.0
O4—C8—N5120.42 (16)C12—N4—H4B120.0
O4—C8—C9121.05 (17)H4A—N4—H4B120.0
N5—C8—C9118.51 (15)C8—N5—N6122.74 (15)
C14—C9—C10117.09 (15)C8—N5—H5123.3
C14—C9—C8123.60 (16)N6—N5—H5113.7
C10—C9—C8119.31 (15)N5—N6—H1N6108.8
O3—C10—C11117.79 (16)N5—N6—H2N6105.9
O3—C10—C9121.39 (16)H1N6—N6—H2N698.4
C11—C10—C9120.82 (15)C3—O1—H1109.5
C10—C11—C12121.17 (17)C10—O3—H3109.5
O2—C1—C2—C7178.86 (16)O4—C8—C9—C105.5 (3)
N2—C1—C2—C7−1.8 (3)N5—C8—C9—C10−173.19 (15)
O2—C1—C2—C3−2.3 (3)C14—C9—C10—O3177.62 (16)
N2—C1—C2—C3177.02 (16)C8—C9—C10—O3−3.2 (3)
C7—C2—C3—O1−177.79 (15)C14—C9—C10—C11−3.1 (3)
C1—C2—C3—O13.3 (2)C8—C9—C10—C11176.03 (16)
C7—C2—C3—C41.8 (2)O3—C10—C11—C12−178.52 (16)
C1—C2—C3—C4−177.12 (16)C9—C10—C11—C122.2 (3)
O1—C3—C4—C5178.53 (16)C10—C11—C12—N4−178.66 (17)
C2—C3—C4—C5−1.1 (3)C10—C11—C12—C130.5 (3)
C3—C4—C5—N1−177.69 (16)N4—C12—C13—C14177.00 (17)
C3—C4—C5—C6−0.3 (3)C11—C12—C13—C14−2.2 (3)
N1—C5—C6—C7178.29 (16)C12—C13—C14—C91.2 (3)
C4—C5—C6—C70.9 (3)C10—C9—C14—C131.4 (3)
C5—C6—C7—C2−0.1 (3)C8—C9—C14—C13−177.66 (16)
C3—C2—C7—C6−1.2 (3)O2—C1—N2—N3−0.7 (3)
C1—C2—C7—C6177.67 (16)C2—C1—N2—N3179.94 (15)
O4—C8—C9—C14−175.39 (17)O4—C8—N5—N63.1 (3)
N5—C8—C9—C145.9 (3)C9—C8—N5—N6−178.16 (16)
D—H···AD—HH···AD···AD—H···A
O1—H1···O20.821.802.5297 (18)147
O3—H3···O40.821.802.528 (2)147
N2—H2···N6i0.982.072.958 (2)149
N5—H5···N3ii0.992.042.934 (2)150
N6—H1N6···O4iii0.912.252.9424 (18)133
N1—H1B···O1iv0.862.243.0358 (19)154
N4—H4B···O2v0.862.302.974 (2)136
N6—H2N6···O3ii0.962.543.207 (2)127
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1—H1⋯O20.821.802.5297 (18)147
O3—H3⋯O40.821.802.528 (2)147
N2—H2⋯N6i 0.982.072.958 (2)149
N5—H5⋯N3ii 0.992.042.934 (2)150
N6—H1N6⋯O4iii 0.912.252.9424 (18)133
N1—H1B⋯O1iv 0.862.243.0358 (19)154
N4—H4B⋯O2v 0.862.302.974 (2)136
N6—H2N6⋯O3ii 0.962.543.207 (2)127

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

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