Literature DB >> 22798792

1,4-Bis(3-methyl-phen-yl)piperazine-2,5-dione.

Yongjun Liu1, Xuefeng Sun, Yonghong Wen.   

Abstract

The asymmetric unit of the title compound, C(18)H(18)N(2)O(2), consists of two independent mol-ecules, each of which is located about a center of inversion. The mol-ecules are not planar, showing dihedral angles of 55.84 (9) and 54.10 (8)° between the piperazinedione and the aromatic rings. The piperazine N atoms exhibit a planar configuration. The crystal packing is stabilized by inter-molecular C-H⋯O hydrogen bonds.

Entities:  

Year:  2012        PMID: 22798792      PMCID: PMC3393927          DOI: 10.1107/S1600536812026372

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the applications of piperazinedione and its derivatives, see: Acharya et al. (2001 ▶); Fischer (2003 ▶); Krchnak et al. (1996 ▶); Paradisi et al. (2002 ▶). For the syntheses and structures of piperazinediones, see: Wen et al. (2006 ▶); Zhang et al. (2007 ▶).

Experimental

Crystal data

C18H18N2O2 M = 294.34 Monoclinic, a = 12.6608 (15) Å b = 6.1508 (7) Å c = 19.223 (2) Å β = 95.142 (2)° V = 1490.9 (3) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 153 K 0.38 × 0.12 × 0.10 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.968, T max = 0.991 7835 measured reflections 2836 independent reflections 2078 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.052 wR(F 2) = 0.137 S = 1.02 2836 reflections 199 parameters H-atom parameters constrained Δρmax = 0.19 e Å−3 Δρmin = −0.22 e Å−3 Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812026372/zq2169sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812026372/zq2169Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812026372/zq2169Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H18N2O2F(000) = 624
Mr = 294.34Dx = 1.311 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 1825 reflections
a = 12.6608 (15) Åθ = 3.2–23.9°
b = 6.1508 (7) ŵ = 0.09 mm1
c = 19.223 (2) ÅT = 153 K
β = 95.142 (2)°Block, colourless
V = 1490.9 (3) Å30.38 × 0.12 × 0.10 mm
Z = 4
Bruker SMART CCD area-detector diffractometer2836 independent reflections
Radiation source: fine-focus sealed tube2078 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.029
phi and ω scansθmax = 25.7°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −15→15
Tmin = 0.968, Tmax = 0.991k = −7→7
7835 measured reflectionsl = −23→12
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.052Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.137H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.0664P)2 + 0.2932P] where P = (Fo2 + 2Fc2)/3
2836 reflections(Δ/σ)max < 0.001
199 parametersΔρmax = 0.19 e Å3
0 restraintsΔρmin = −0.22 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O20.14816 (10)0.1901 (2)0.50117 (7)0.0517 (4)
N20.09833 (10)0.5171 (2)0.54147 (8)0.0372 (4)
O10.53271 (11)1.1732 (2)0.59161 (8)0.0571 (4)
N10.58560 (11)1.5000 (2)0.55280 (8)0.0423 (4)
C150.19661 (13)0.5530 (3)0.58423 (9)0.0369 (4)
C160.08291 (13)0.3358 (3)0.50265 (9)0.0383 (4)
C140.25272 (14)0.7430 (3)0.57627 (10)0.0432 (5)
H14A0.22750.84700.54380.052*
C60.67677 (14)1.5123 (3)0.60368 (10)0.0434 (5)
C70.52080 (14)1.3255 (3)0.55088 (11)0.0431 (5)
C10.75220 (14)1.3485 (3)0.60645 (10)0.0442 (5)
H1A0.74161.22800.57740.053*
C100.23305 (13)0.4011 (3)0.63376 (9)0.0410 (5)
H10A0.19420.27480.63910.049*
C130.34654 (15)0.7763 (3)0.61707 (11)0.0499 (5)
H13A0.38530.90260.61160.060*
C80.56977 (15)1.6836 (3)0.50490 (11)0.0487 (5)
H8A0.63451.70260.48210.058*
H8B0.56081.81300.53260.058*
C170.02008 (14)0.6913 (3)0.54148 (11)0.0480 (5)
H17A0.05320.82360.52670.058*
H17B0.00380.71340.58930.058*
C120.38306 (15)0.6248 (3)0.66558 (11)0.0505 (5)
H12A0.44680.64930.69240.061*
C110.32667 (14)0.4345 (3)0.67562 (10)0.0443 (5)
C50.69087 (17)1.6911 (3)0.64691 (11)0.0563 (6)
H5A0.64051.80150.64500.068*
C90.92602 (17)1.1862 (4)0.65370 (13)0.0715 (7)
H9A0.90371.07510.62050.107*
H9B0.93531.12430.69970.107*
H9C0.99201.24720.64200.107*
C40.78057 (19)1.7042 (4)0.69301 (12)0.0656 (7)
H4A0.79011.82300.72290.079*
C20.84310 (15)1.3621 (4)0.65189 (10)0.0507 (5)
C180.36529 (18)0.2729 (4)0.73046 (12)0.0676 (7)
H18A0.31670.15280.72980.101*
H18B0.36970.34120.77550.101*
H18C0.43410.22100.72110.101*
C30.85602 (18)1.5430 (4)0.69520 (12)0.0637 (6)
H3A0.91661.55520.72610.076*
U11U22U33U12U13U23
O20.0451 (8)0.0387 (7)0.0687 (9)0.0118 (6)−0.0098 (7)−0.0062 (7)
N20.0339 (8)0.0303 (8)0.0456 (9)0.0019 (6)−0.0069 (7)0.0003 (7)
O10.0545 (8)0.0430 (8)0.0724 (10)−0.0054 (6)−0.0018 (7)0.0148 (7)
N10.0392 (8)0.0338 (8)0.0535 (10)−0.0026 (6)0.0027 (7)0.0021 (7)
C150.0342 (9)0.0362 (9)0.0392 (10)0.0025 (7)−0.0029 (8)−0.0016 (8)
C160.0383 (9)0.0311 (9)0.0445 (11)0.0019 (7)−0.0019 (8)0.0034 (8)
C140.0472 (11)0.0374 (10)0.0439 (10)−0.0030 (8)−0.0015 (9)0.0029 (9)
C60.0432 (10)0.0423 (10)0.0455 (11)−0.0072 (8)0.0087 (9)0.0010 (9)
C70.0400 (10)0.0313 (9)0.0592 (12)0.0005 (8)0.0102 (9)0.0007 (9)
C10.0455 (11)0.0457 (11)0.0413 (11)−0.0040 (9)0.0031 (9)−0.0003 (9)
C100.0378 (10)0.0401 (10)0.0441 (10)−0.0011 (8)−0.0018 (9)0.0047 (9)
C130.0447 (11)0.0495 (11)0.0544 (12)−0.0134 (9)−0.0009 (10)−0.0011 (10)
C80.0428 (10)0.0357 (10)0.0672 (14)−0.0047 (8)0.0027 (10)0.0067 (10)
C170.0431 (10)0.0355 (10)0.0621 (13)0.0075 (8)−0.0134 (10)−0.0099 (9)
C120.0364 (10)0.0625 (13)0.0506 (12)−0.0052 (9)−0.0078 (9)−0.0038 (10)
C110.0387 (10)0.0530 (12)0.0401 (10)0.0060 (9)−0.0025 (8)0.0015 (9)
C50.0569 (13)0.0472 (12)0.0662 (14)−0.0086 (10)0.0129 (11)−0.0103 (11)
C90.0516 (13)0.0829 (17)0.0775 (17)0.0030 (12)−0.0078 (12)0.0164 (14)
C40.0691 (15)0.0647 (15)0.0635 (15)−0.0252 (12)0.0093 (13)−0.0206 (12)
C20.0451 (11)0.0616 (13)0.0454 (11)−0.0088 (10)0.0037 (9)0.0078 (10)
C180.0633 (14)0.0744 (15)0.0606 (14)0.0066 (12)−0.0191 (12)0.0146 (13)
C30.0527 (13)0.0801 (17)0.0565 (13)−0.0237 (12)−0.0040 (11)−0.0001 (13)
O2—C161.221 (2)C8—C7ii1.499 (3)
N2—C161.346 (2)C8—H8A0.9700
N2—C151.445 (2)C8—H8B0.9700
N2—C171.459 (2)C17—C16i1.500 (2)
O1—C71.221 (2)C17—H17A0.9700
N1—C71.349 (2)C17—H17B0.9700
N1—C61.446 (2)C12—C111.393 (3)
N1—C81.460 (2)C12—H12A0.9300
C15—C101.383 (2)C11—C181.499 (3)
C15—C141.383 (2)C5—C41.379 (3)
C16—C17i1.500 (2)C5—H5A0.9300
C14—C131.379 (3)C9—C21.505 (3)
C14—H14A0.9300C9—H9A0.9600
C6—C51.380 (3)C9—H9B0.9600
C6—C11.386 (3)C9—H9C0.9600
C7—C8ii1.499 (3)C4—C31.375 (3)
C1—C21.384 (3)C4—H4A0.9300
C1—H1A0.9300C2—C31.391 (3)
C10—C111.387 (2)C18—H18A0.9600
C10—H10A0.9300C18—H18B0.9600
C13—C121.369 (3)C18—H18C0.9600
C13—H13A0.9300C3—H3A0.9300
C16—N2—C15121.08 (14)N2—C17—C16i118.32 (15)
C16—N2—C17122.92 (14)N2—C17—H17A107.7
C15—N2—C17115.97 (14)C16i—C17—H17A107.7
C7—N1—C6120.45 (16)N2—C17—H17B107.7
C7—N1—C8123.32 (15)C16i—C17—H17B107.7
C6—N1—C8116.22 (14)H17A—C17—H17B107.1
C10—C15—C14120.26 (16)C13—C12—C11121.34 (17)
C10—C15—N2120.36 (15)C13—C12—H12A119.3
C14—C15—N2119.37 (15)C11—C12—H12A119.3
O2—C16—N2123.79 (16)C10—C11—C12117.77 (17)
O2—C16—C17i117.46 (16)C10—C11—C18121.18 (18)
N2—C16—C17i118.75 (15)C12—C11—C18121.04 (17)
C13—C14—C15119.16 (17)C4—C5—C6119.2 (2)
C13—C14—H14A120.4C4—C5—H5A120.4
C15—C14—H14A120.4C6—C5—H5A120.4
C5—C6—C1120.31 (18)C2—C9—H9A109.5
C5—C6—N1120.09 (18)C2—C9—H9B109.5
C1—C6—N1119.54 (16)H9A—C9—H9B109.5
O1—C7—N1123.53 (18)C2—C9—H9C109.5
O1—C7—C8ii118.20 (16)H9A—C9—H9C109.5
N1—C7—C8ii118.26 (17)H9B—C9—H9C109.5
C2—C1—C6120.76 (18)C3—C4—C5120.5 (2)
C2—C1—H1A119.6C3—C4—H4A119.7
C6—C1—H1A119.6C5—C4—H4A119.7
C15—C10—C11120.95 (17)C1—C2—C3118.2 (2)
C15—C10—H10A119.5C1—C2—C9120.7 (2)
C11—C10—H10A119.5C3—C2—C9121.12 (19)
C12—C13—C14120.50 (18)C11—C18—H18A109.5
C12—C13—H13A119.8C11—C18—H18B109.5
C14—C13—H13A119.8H18A—C18—H18B109.5
N1—C8—C7ii118.38 (15)C11—C18—H18C109.5
N1—C8—H8A107.7H18A—C18—H18C109.5
C7ii—C8—H8A107.7H18B—C18—H18C109.5
N1—C8—H8B107.7C4—C3—C2121.0 (2)
C7ii—C8—H8B107.7C4—C3—H3A119.5
H8A—C8—H8B107.1C2—C3—H3A119.5
C16—N2—C15—C10−55.7 (2)C14—C15—C10—C11−0.8 (3)
C17—N2—C15—C10126.27 (19)N2—C15—C10—C11−179.35 (17)
C16—N2—C15—C14125.74 (19)C15—C14—C13—C12−0.9 (3)
C17—N2—C15—C14−52.3 (2)C7—N1—C8—C7ii−2.2 (3)
C15—N2—C16—O21.0 (3)C6—N1—C8—C7ii177.36 (16)
C17—N2—C16—O2178.81 (19)C16—N2—C17—C16i1.3 (3)
C15—N2—C16—C17i−179.17 (17)C15—N2—C17—C16i179.26 (16)
C17—N2—C16—C17i−1.3 (3)C14—C13—C12—C11−0.5 (3)
C10—C15—C14—C131.6 (3)C15—C10—C11—C12−0.6 (3)
N2—C15—C14—C13−179.86 (17)C15—C10—C11—C18178.63 (19)
C7—N1—C6—C5−126.3 (2)C13—C12—C11—C101.3 (3)
C8—N1—C6—C554.1 (2)C13—C12—C11—C18−177.93 (19)
C7—N1—C6—C156.7 (2)C1—C6—C5—C4−0.3 (3)
C8—N1—C6—C1−122.93 (19)N1—C6—C5—C4−177.27 (19)
C6—N1—C7—O11.7 (3)C6—C5—C4—C31.1 (3)
C8—N1—C7—O1−178.69 (18)C6—C1—C2—C30.8 (3)
C6—N1—C7—C8ii−177.35 (17)C6—C1—C2—C9−178.7 (2)
C8—N1—C7—C8ii2.2 (3)C5—C4—C3—C2−0.9 (4)
C5—C6—C1—C2−0.7 (3)C1—C2—C3—C40.0 (3)
N1—C6—C1—C2176.35 (17)C9—C2—C3—C4179.4 (2)
D—H···AD—HH···AD···AD—H···A
C8—H8B···O1iii0.972.533.494 (2)173
C14—H14A···O2iii0.932.453.325 (3)158
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C8—H8B⋯O1i 0.972.533.494 (2)173
C14—H14A⋯O2i 0.932.453.325 (3)158

Symmetry code: (i) .

  4 in total

Review 1.  Diketopiperazines in peptide and combinatorial chemistry.

Authors:  Peter M Fischer
Journal:  J Pept Sci       Date:  2003-01       Impact factor: 1.905

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Structurally homogeneous and heterogeneous synthetic combinatorial libraries.

Authors:  V Krchnák; A S Weichsel; D Cabel; Z Flegelova; M Lebl
Journal:  Mol Divers       Date:  1996-05       Impact factor: 2.943

4.  Solid-phase synthesis of substituted imidazoline-tethered 2,3-diketopiperazines, cyclic ureas, and cyclic thioureas.

Authors:  A N Acharya; J M Ostresh; R A Houghten
Journal:  J Comb Chem       Date:  2001 Nov-Dec
  4 in total

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