Literature DB >> 22798776

1-Benzyl-3-[(4-methyl-phen-yl)imino]-indolin-2-one.

Adebomi A Ikotun, Pius O Adelani, Gabriel O Egharevba.   

Abstract

In the title compound, C(22)H(18)N(2)O, the phenyl and tolyl rings make dihedral angles of 84.71 (7) and 65.11 (6)°, respectively, with the isatin group. The aromatic rings make a dihedral angle of 60.90 (8)°. The imino C=N double bond, exists in an E conformation. In the crystal, mol-ecules are linked by weak π-π stacking inter-actions [centroid-centroid distance = 3.6598 (13) Å].

Entities:  

Year:  2012        PMID: 22798776      PMCID: PMC3393911          DOI: 10.1107/S1600536812024506

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to isatin, its derivatives and their biological significance, see: Chazeau et al. (1992 ▶); Igosheva et al. (2004 ▶); Medvedev et al. (1996 ▶); Abele et al. (2003 ▶). For metal complexes of isatin derivatives and their biological significance, see: Rodriguez-Arguelles et al. (2004 ▶); Singh et al. (2005 ▶); Chohan et al. (2006 ▶); Adetoye et al. (2009 ▶); Ikotun et al. (2012 ▶). For N-benzyl isatin, its derivatives and biological significance, see Akkurt et al. (2006 ▶); Jarrahpour & Khalili (2007 ▶); Cao et al. (2009 ▶).

Experimental

Crystal data

C22H18N2O M = 326.38 Monoclinic, a = 10.174 (2) Å b = 15.086 (4) Å c = 11.714 (3) Å β = 113.596 (3)° V = 1647.5 (7) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 296 K 0.04 × 0.02 × 0.01 mm

Data collection

Bruker SMART CCD area-detector diffractometer 18815 measured reflections 3763 independent reflections 2456 reflections with I > 2σ(I) R int = 0.067

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.105 S = 0.92 3763 reflections 227 parameters H-atom parameters constrained Δρmax = 0.35 e Å−3 Δρmin = −0.31 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812024506/bx2411sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812024506/bx2411Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812024506/bx2411Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C22H18N2OF(000) = 688
Mr = 326.38Dx = 1.316 Mg m3
Monoclinic, P21/cMelting point: 427 K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 10.174 (2) ÅCell parameters from 3069 reflections
b = 15.086 (4) Åθ = 2.6–25.6°
c = 11.714 (3) ŵ = 0.08 mm1
β = 113.596 (3)°T = 296 K
V = 1647.5 (7) Å3Rectangular plate, orange
Z = 40.04 × 0.02 × 0.01 mm
Bruker SMART CCD area-detector diffractometer2456 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.067
Graphite monochromatorθmax = 27.5°, θmin = 2.2°
phi and ω scansh = −12→13
18815 measured reflectionsk = −19→19
3763 independent reflectionsl = −15→15
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.042H-atom parameters constrained
wR(F2) = 0.105w = 1/[σ2(Fo2) + (0.0513P)2] where P = (Fo2 + 2Fc2)/3
S = 0.92(Δ/σ)max < 0.001
3763 reflectionsΔρmax = 0.35 e Å3
227 parametersΔρmin = −0.31 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0075 (12)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.30165 (11)0.19312 (7)0.89390 (10)0.0256 (3)
N10.23619 (13)0.32278 (8)0.77977 (12)0.0192 (3)
N20.06155 (13)0.22984 (8)0.95540 (12)0.0195 (3)
C18−0.15861 (16)0.18456 (10)0.97075 (14)0.0221 (4)
H18A−0.16100.13530.92230.027*
C19−0.26219 (17)0.19479 (11)1.01801 (15)0.0237 (4)
H19A−0.33540.15310.99840.028*
C6−0.10985 (17)0.48946 (10)0.72028 (14)0.0217 (4)
H6A−0.18860.52530.70850.026*
C80.09598 (16)0.45662 (10)0.67264 (14)0.0204 (4)
H8A0.15410.46940.63050.024*
C90.12438 (16)0.38541 (10)0.75280 (14)0.0179 (3)
C110.43743 (16)0.40255 (10)0.75565 (14)0.0197 (4)
C22−0.04756 (17)0.32009 (10)1.06994 (14)0.0226 (4)
H22A0.02360.36291.08720.027*
C5−0.08057 (16)0.41752 (10)0.80063 (14)0.0203 (4)
H5A−0.13940.40460.84210.024*
C100.34082 (17)0.32210 (10)0.72300 (15)0.0233 (4)
H10A0.29000.31900.63320.028*
H10B0.39960.26930.74990.028*
C17−0.05075 (16)0.24753 (10)0.99516 (14)0.0192 (3)
C40.03861 (16)0.36512 (10)0.81794 (14)0.0178 (3)
C20−0.25950 (16)0.26584 (10)1.09418 (14)0.0211 (4)
C7−0.02307 (16)0.50861 (10)0.65726 (14)0.0209 (4)
H7A−0.04490.55710.60380.025*
C21−0.15100 (17)0.32812 (10)1.11853 (15)0.0236 (4)
H21A−0.14760.37651.16880.028*
C30.09602 (16)0.28278 (10)0.88691 (14)0.0182 (3)
C20.22451 (16)0.25759 (10)0.85647 (14)0.0196 (3)
C160.52131 (17)0.42307 (11)0.87874 (15)0.0249 (4)
H16A0.51740.38730.94200.030*
C120.44522 (17)0.45665 (12)0.66264 (16)0.0289 (4)
H12A0.39030.44350.57950.035*
C130.53422 (18)0.53003 (12)0.69284 (18)0.0339 (5)
H13A0.53860.56600.63000.041*
C150.61098 (18)0.49624 (12)0.90861 (17)0.0315 (4)
H15A0.66760.50900.99160.038*
C140.61647 (18)0.54999 (11)0.81580 (18)0.0332 (5)
H14A0.67550.59970.83590.040*
C23−0.36913 (18)0.27314 (12)1.15025 (16)0.0290 (4)
H23A−0.35150.32591.20000.044*
H23B−0.36220.22231.20160.044*
H23C−0.46350.27591.08480.044*
U11U22U33U12U13U23
O10.0239 (6)0.0211 (6)0.0327 (7)0.0069 (5)0.0122 (5)0.0020 (5)
N10.0175 (7)0.0178 (7)0.0251 (7)0.0009 (5)0.0115 (6)0.0001 (5)
N20.0186 (7)0.0179 (7)0.0218 (7)−0.0012 (5)0.0077 (6)−0.0007 (6)
C180.0239 (9)0.0178 (8)0.0236 (9)−0.0010 (7)0.0084 (7)−0.0019 (7)
C190.0185 (8)0.0245 (9)0.0268 (9)−0.0041 (7)0.0076 (7)0.0006 (7)
C60.0198 (8)0.0183 (8)0.0271 (9)0.0023 (7)0.0094 (7)−0.0022 (7)
C80.0205 (8)0.0195 (8)0.0231 (8)−0.0037 (7)0.0108 (7)−0.0019 (7)
C90.0169 (8)0.0146 (8)0.0224 (8)−0.0011 (6)0.0080 (7)−0.0033 (6)
C110.0163 (8)0.0205 (8)0.0259 (9)0.0039 (6)0.0123 (7)0.0011 (7)
C220.0214 (9)0.0208 (9)0.0255 (9)−0.0043 (7)0.0091 (7)−0.0014 (7)
C50.0195 (8)0.0198 (8)0.0241 (9)−0.0014 (7)0.0112 (7)−0.0015 (7)
C100.0207 (9)0.0257 (9)0.0277 (9)0.0017 (7)0.0140 (7)−0.0037 (7)
C170.0194 (8)0.0183 (8)0.0188 (8)0.0027 (6)0.0067 (7)0.0041 (6)
C40.0172 (8)0.0158 (8)0.0201 (8)−0.0019 (6)0.0071 (7)−0.0020 (6)
C200.0189 (8)0.0239 (9)0.0192 (8)0.0017 (7)0.0065 (7)0.0027 (7)
C70.0240 (9)0.0161 (8)0.0221 (9)−0.0008 (7)0.0086 (7)0.0002 (6)
C210.0250 (9)0.0242 (9)0.0224 (9)−0.0011 (7)0.0102 (7)−0.0043 (7)
C30.0161 (8)0.0153 (8)0.0215 (8)−0.0018 (6)0.0057 (7)−0.0027 (6)
C20.0187 (8)0.0181 (8)0.0218 (8)−0.0018 (7)0.0078 (7)−0.0036 (7)
C160.0245 (9)0.0267 (9)0.0266 (9)0.0012 (7)0.0136 (8)0.0030 (7)
C120.0179 (8)0.0421 (11)0.0277 (9)0.0035 (8)0.0102 (7)0.0101 (8)
C130.0218 (9)0.0368 (11)0.0476 (12)0.0062 (8)0.0185 (9)0.0211 (9)
C150.0265 (10)0.0343 (10)0.0362 (11)−0.0052 (8)0.0152 (9)−0.0097 (8)
C140.0229 (9)0.0217 (9)0.0617 (13)−0.0011 (7)0.0238 (9)−0.0011 (9)
C230.0250 (9)0.0378 (10)0.0264 (9)−0.0001 (8)0.0125 (8)0.0007 (8)
O1—C21.2160 (18)C22—H22A0.9300
N1—C21.3690 (19)C5—C41.393 (2)
N1—C91.4137 (19)C5—H5A0.9300
N1—C101.4636 (19)C10—H10A0.9700
N2—C31.2767 (19)C10—H10B0.9700
N2—C171.4210 (19)C4—C31.469 (2)
C18—C191.381 (2)C20—C211.389 (2)
C18—C171.392 (2)C20—C231.508 (2)
C18—H18A0.9300C7—H7A0.9300
C19—C201.388 (2)C21—H21A0.9300
C19—H19A0.9300C3—C21.534 (2)
C6—C51.389 (2)C16—C151.385 (2)
C6—C71.389 (2)C16—H16A0.9300
C6—H6A0.9300C12—C131.383 (2)
C8—C91.379 (2)C12—H12A0.9300
C8—C71.393 (2)C13—C141.379 (3)
C8—H8A0.9300C13—H13A0.9300
C9—C41.404 (2)C15—C141.375 (2)
C11—C161.385 (2)C15—H15A0.9300
C11—C121.389 (2)C14—H14A0.9300
C11—C101.511 (2)C23—H23A0.9600
C22—C211.388 (2)C23—H23B0.9600
C22—C171.394 (2)C23—H23C0.9600
C2—N1—C9110.69 (13)C5—C4—C3133.73 (14)
C2—N1—C10124.27 (13)C9—C4—C3106.64 (13)
C9—N1—C10124.73 (13)C19—C20—C21117.63 (15)
C3—N2—C17123.20 (13)C19—C20—C23120.58 (15)
C19—C18—C17120.45 (15)C21—C20—C23121.78 (15)
C19—C18—H18A119.8C6—C7—C8121.26 (15)
C17—C18—H18A119.8C6—C7—H7A119.4
C18—C19—C20121.47 (15)C8—C7—H7A119.4
C18—C19—H19A119.3C22—C21—C20121.84 (15)
C20—C19—H19A119.3C22—C21—H21A119.1
C5—C6—C7120.88 (15)C20—C21—H21A119.1
C5—C6—H6A119.6N2—C3—C4136.53 (14)
C7—C6—H6A119.6N2—C3—C2117.71 (13)
C9—C8—C7117.45 (14)C4—C3—C2105.65 (12)
C9—C8—H8A121.3O1—C2—N1126.74 (15)
C7—C8—H8A121.3O1—C2—C3126.97 (14)
C8—C9—C4122.25 (14)N1—C2—C3106.29 (13)
C8—C9—N1127.10 (14)C15—C16—C11120.69 (16)
C4—C9—N1110.64 (13)C15—C16—H16A119.7
C16—C11—C12118.72 (15)C11—C16—H16A119.7
C16—C11—C10120.68 (14)C13—C12—C11120.44 (17)
C12—C11—C10120.60 (15)C13—C12—H12A119.8
C21—C22—C17119.70 (14)C11—C12—H12A119.8
C21—C22—H22A120.1C14—C13—C12120.23 (16)
C17—C22—H22A120.1C14—C13—H13A119.9
C6—C5—C4118.71 (14)C12—C13—H13A119.9
C6—C5—H5A120.6C14—C15—C16120.09 (17)
C4—C5—H5A120.6C14—C15—H15A120.0
N1—C10—C11113.38 (12)C16—C15—H15A120.0
N1—C10—H10A108.9C15—C14—C13119.82 (17)
C11—C10—H10A108.9C15—C14—H14A120.1
N1—C10—H10B108.9C13—C14—H14A120.1
C11—C10—H10B108.9C20—C23—H23A109.5
H10A—C10—H10B107.7C20—C23—H23B109.5
C18—C17—C22118.88 (15)H23A—C23—H23B109.5
C18—C17—N2118.41 (14)C20—C23—H23C109.5
C22—C17—N2122.27 (14)H23A—C23—H23C109.5
C5—C4—C9119.44 (14)H23B—C23—H23C109.5
  6 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Synthesis, characterization and biological activity of Ni, Cu and Zn complexes of isatin hydrazones.

Authors:  Maria C Rodríuez-Argüelles; Marisa Belicchi errari; Franco Bisceglie; Corrado Pelizzi; Giorgio Pelosi; Silvana Pinelli; Monica Sassi
Journal:  J Inorg Biochem       Date:  2004-02       Impact factor: 4.155

3.  Isatin: a link between natriuretic peptides and monoamines?

Authors:  A E Medvedev; A Clow; M Sandler; V Glover
Journal:  Biochem Pharmacol       Date:  1996-08-09       Impact factor: 5.858

4.  Structure-based design and parallel synthesis of N-benzyl isatin oximes as JNK3 MAP kinase inhibitors.

Authors:  Jingrong Cao; Huai Gao; Guy Bemis; Francesco Salituro; Mark Ledeboer; Edmund Harrington; Susanne Wilke; Paul Taslimi; S Pazhanisamy; Xiaoling Xie; Marc Jacobs; Jeremy Green
Journal:  Bioorg Med Chem Lett       Date:  2009-03-17       Impact factor: 2.823

5.  Effect of acute stress and gender on isatin in rat tissues and serum.

Authors:  Natalia Igosheva; Simon Matta; Vivette Glover
Journal:  Physiol Behav       Date:  2004-02

6.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  6 in total

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