Literature DB >> 22798768

(E,E)-1,2-Bis[3-(prop-2-yn-1-yl-oxy)benzyl-idene]hydrazine.

Wisam Naji Atiyah Al-Mehana, Rosiyah Yahya, Faridah Sonsudin, Kong Mun Lo.   

Abstract

The mol-ecule of the title compound, C(20)H(16)N(2)O(2), is centrosymmetric, the inversion center being located at the mid-point of the central azine bond. The conformation around the C=N bond is E. The whole mol-ecule (except for the H atoms) is essentially planar, with an r.m.s. deviation of 0.07 Å. In the crystal, mol-ecules are linked head-to-tail by pairs of C-H⋯O hydrogen bonds, forming inversion dimers, and resulting in the formation of chains propagating along [011].

Entities:  

Year:  2012        PMID: 22798768      PMCID: PMC3393903          DOI: 10.1107/S1600536812025524

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For biological properties and practical appplications of diacetyl­ene compounds, see: Zloh et al. (2007 ▶); Buckley & Neumeister (1992 ▶). For the structure of (E,E)-1,2-bis­[3-(prop-2-yn-1-yl­oxy)benzyl­indene]­hydrazine see: Al-Mehana et al. (2011 ▶).

Experimental

Crystal data

C20H16N2O2 M = 316.35 Triclinic, a = 4.5700 (3) Å b = 9.4947 (7) Å c = 9.8920 (8) Å α = 67.986 (7)° β = 77.487 (6)° γ = 84.132 (6)° V = 388.37 (5) Å3 Z = 1 Mo Kα radiation μ = 0.09 mm−1 T = 100 K 0.1 × 0.08 × 0.08 mm

Data collection

Agilent SuperNova Dual (Cu) Atlas diffractometer Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012 ▶) T min = 0.440, T max = 1.000 2956 measured reflections 1710 independent reflections 1508 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.122 S = 1.02 1710 reflections 109 parameters H-atom parameters constrained Δρmax = 0.23 e Å−3 Δρmin = −0.29 e Å−3 Data collection: CrysAlis PRO (Agilent, 2012 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: pubCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812025524/su2430sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812025524/su2430Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812025524/su2430Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H16N2O2Z = 1
Mr = 316.35F(000) = 166
Triclinic, P1Dx = 1.353 Mg m3
Hall symbol: -P 1Melting point = 401–403 K
a = 4.5700 (3) ÅMo Kα radiation, λ = 0.71073 Å
b = 9.4947 (7) ÅCell parameters from 1636 reflections
c = 9.8920 (8) Åθ = 2.3–29.1°
α = 67.986 (7)°µ = 0.09 mm1
β = 77.487 (6)°T = 100 K
γ = 84.132 (6)°Block, colourless
V = 388.37 (5) Å30.1 × 0.08 × 0.08 mm
Agilent SuperNova Dual (Cu at zero) Atlas diffractometer1710 independent reflections
Radiation source: SuperNova (Mo) X-ray Source1508 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.027
ω scansθmax = 27.5°, θmin = 2.3°
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012)h = −5→4
Tmin = 0.440, Tmax = 1.000k = −12→12
2956 measured reflectionsl = −12→12
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.122H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.0756P)2 + 0.0718P] where P = (Fo2 + 2Fc2)/3
1710 reflections(Δ/σ)max < 0.001
109 parametersΔρmax = 0.23 e Å3
0 restraintsΔρmin = −0.29 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell esds are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.26162 (18)0.81143 (9)0.53750 (8)0.0186 (3)
N10.9141 (2)0.53809 (10)0.94457 (10)0.0154 (3)
C10.1926 (3)0.64779 (13)0.28726 (13)0.0223 (3)
C20.2727 (3)0.67068 (13)0.38360 (13)0.0201 (3)
C30.3877 (3)0.68058 (13)0.50670 (13)0.0202 (3)
C40.3322 (2)0.82703 (12)0.65948 (12)0.0150 (3)
C50.1900 (3)0.94943 (13)0.69477 (13)0.0173 (3)
C60.2352 (3)0.97068 (12)0.81942 (13)0.0186 (3)
C70.4213 (3)0.87082 (13)0.90930 (13)0.0176 (3)
C80.5677 (2)0.75107 (12)0.87209 (12)0.0151 (3)
C90.5252 (2)0.72894 (12)0.74544 (12)0.0148 (3)
C100.7639 (2)0.65050 (12)0.96900 (12)0.0150 (3)
H10.130000.629900.211900.0270*
H3A0.336300.590000.594400.0240*
H3B0.604400.687000.480800.0240*
H50.065801.016200.634900.0210*
H60.140901.052100.843500.0220*
H70.447500.884400.994200.0210*
H90.624800.649700.719200.0180*
H100.780300.669301.052800.0180*
U11U22U33U12U13U23
O10.0223 (5)0.0187 (4)0.0173 (4)0.0091 (3)−0.0109 (3)−0.0080 (3)
N10.0141 (5)0.0152 (5)0.0162 (5)0.0017 (4)−0.0086 (4)−0.0022 (4)
C10.0254 (6)0.0225 (6)0.0209 (6)0.0061 (5)−0.0105 (5)−0.0083 (5)
C20.0206 (6)0.0183 (6)0.0204 (6)0.0069 (4)−0.0071 (4)−0.0061 (5)
C30.0218 (6)0.0209 (6)0.0208 (6)0.0085 (5)−0.0101 (5)−0.0098 (5)
C40.0146 (5)0.0156 (5)0.0135 (5)−0.0005 (4)−0.0045 (4)−0.0027 (4)
C50.0166 (6)0.0146 (5)0.0184 (6)0.0037 (4)−0.0076 (4)−0.0021 (4)
C60.0205 (6)0.0132 (5)0.0225 (6)0.0049 (4)−0.0069 (5)−0.0069 (4)
C70.0194 (6)0.0170 (5)0.0184 (5)0.0014 (4)−0.0082 (4)−0.0065 (4)
C80.0126 (5)0.0136 (5)0.0175 (5)−0.0001 (4)−0.0050 (4)−0.0028 (4)
C90.0142 (5)0.0128 (5)0.0166 (5)0.0026 (4)−0.0044 (4)−0.0044 (4)
C100.0150 (5)0.0152 (5)0.0160 (5)0.0000 (4)−0.0067 (4)−0.0050 (4)
O1—C31.4247 (16)C8—C91.4009 (16)
O1—C41.3763 (13)C8—C101.4649 (15)
N1—C101.2808 (15)C1—H10.9300
N1—N1i1.4158 (13)C3—H3A0.9700
C1—C21.1883 (18)C3—H3B0.9700
C2—C31.4632 (18)C5—H50.9300
C4—C51.3951 (18)C6—H60.9300
C4—C91.3899 (15)C7—H70.9300
C5—C61.3817 (17)C9—H90.9300
C6—C71.3941 (18)C10—H100.9300
C7—C81.3883 (18)
C3—O1—C4115.61 (9)O1—C3—H3A110.00
N1i—N1—C10111.29 (9)O1—C3—H3B110.00
C1—C2—C3173.13 (14)C2—C3—H3A110.00
O1—C3—C2109.82 (11)C2—C3—H3B110.00
O1—C4—C5115.01 (10)H3A—C3—H3B108.00
O1—C4—C9124.05 (11)C4—C5—H5120.00
C5—C4—C9120.93 (11)C6—C5—H5120.00
C4—C5—C6119.44 (12)C5—C6—H6120.00
C5—C6—C7120.38 (12)C7—C6—H6120.00
C6—C7—C8120.04 (11)C6—C7—H7120.00
C7—C8—C9120.09 (10)C8—C7—H7120.00
C7—C8—C10117.97 (10)C4—C9—H9120.00
C9—C8—C10121.94 (10)C8—C9—H9120.00
C4—C9—C8119.08 (11)N1—C10—H10118.00
N1—C10—C8123.54 (10)C8—C10—H10118.00
C2—C1—H1180.00
C3—O1—C4—C93.31 (15)C4—C5—C6—C70.0 (2)
C4—O1—C3—C2174.74 (10)C5—C6—C7—C81.4 (2)
C3—O1—C4—C5−175.53 (10)C6—C7—C8—C10179.20 (11)
C10—N1—N1i—C10i179.98 (10)C6—C7—C8—C9−0.97 (18)
N1i—N1—C10—C8179.47 (9)C7—C8—C9—C4−0.85 (16)
O1—C4—C5—C6177.00 (11)C7—C8—C10—N1−178.79 (11)
C9—C4—C5—C6−1.88 (18)C9—C8—C10—N11.38 (17)
C5—C4—C9—C82.29 (16)C10—C8—C9—C4178.97 (10)
O1—C4—C9—C8−176.49 (10)
D—H···AD—HH···AD···AD—H···A
C5—H5···O1ii0.932.523.4467 (16)177
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C5—H5⋯O1i 0.932.523.4467 (16)177

Symmetry code: (i) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  (E,E)-1,2-Bis[4-(prop-2-yn-1-yl-oxy)benzyl-idene]hydrazine.

Authors:  Wisam Naji Atiyah Al-Mehana; Rosiyah Yahya; Kong Mun Lo
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-10-08
  2 in total

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