Literature DB >> 22794311

Rad26p, a transcription-coupled repair factor, promotes the eviction and prevents the reassociation of histone H2A-H2B dimer during transcriptional elongation in vivo.

Shivani Malik1, Sukesh R Bhaumik.   

Abstract

We have recently demonstrated the formation of an atypical histone H2A-H2B dimer-enriched chromatin at the coding sequence of the active gene in the absence of Rad26p in vivo. However, the mechanisms for such a surprising observation remain unknown. Here, using a ChIP assay, we demonstrate that Rad26p promotes the eviction of histone H2A-H2B dimer and prevents the reassociation of the dimer with naked DNA in the wake of elongating RNA polymerase II at the coding sequence of the active GAL1 gene. Thus, the absence of Rad26p leads to the generation of an atypical histone H2A-H2B dimer-enriched chromatin at the active coding sequence in vivo.

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Year:  2012        PMID: 22794311      PMCID: PMC3447996          DOI: 10.1021/bi3005768

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  15 in total

1.  DNA repair. The bases for Cockayne syndrome.

Authors:  P C Hanawalt
Journal:  Nature       Date:  2000-05-25       Impact factor: 49.962

2.  Asf1 mediates histone eviction and deposition during elongation by RNA polymerase II.

Authors:  Marc A Schwabish; Kevin Struhl
Journal:  Mol Cell       Date:  2006-05-05       Impact factor: 17.970

3.  Cockayne syndrome group B protein enhances elongation by RNA polymerase II.

Authors:  C P Selby; A Sancar
Journal:  Proc Natl Acad Sci U S A       Date:  1997-10-14       Impact factor: 11.205

4.  Requirement for yeast RAD26, a homolog of the human CSB gene, in elongation by RNA polymerase II.

Authors:  S K Lee; S L Yu; L Prakash; S Prakash
Journal:  Mol Cell Biol       Date:  2001-12       Impact factor: 4.272

5.  Recruitment of the putative transcription-repair coupling factor CSB/ERCC6 to RNA polymerase II elongation complexes.

Authors:  D Tantin; A Kansal; M Carey
Journal:  Mol Cell Biol       Date:  1997-12       Impact factor: 4.272

6.  Deletion of the CSB homolog, RAD26, yields Spt(-) strains with proficient transcription-coupled repair.

Authors:  S M Gregory; K S Sweder
Journal:  Nucleic Acids Res       Date:  2001-07-15       Impact factor: 16.971

7.  RAD26, the yeast homolog of human Cockayne's syndrome group B gene, encodes a DNA-dependent ATPase.

Authors:  S N Guzder; Y Habraken; P Sung; L Prakash; S Prakash
Journal:  J Biol Chem       Date:  1996-08-02       Impact factor: 5.157

8.  Human transcription-repair coupling factor CSB/ERCC6 is a DNA-stimulated ATPase but is not a helicase and does not disrupt the ternary transcription complex of stalled RNA polymerase II.

Authors:  C P Selby; A Sancar
Journal:  J Biol Chem       Date:  1997-01-17       Impact factor: 5.157

9.  Yeast RAD26, a homolog of the human CSB gene, functions independently of nucleotide excision repair and base excision repair in promoting transcription through damaged bases.

Authors:  Sung-Keun Lee; Sung-Lim Yu; Louise Prakash; Satya Prakash
Journal:  Mol Cell Biol       Date:  2002-06       Impact factor: 4.272

10.  Rad26p regulates the occupancy of histone H2A-H2B dimer at the active genes in vivo.

Authors:  Shivani Malik; Priyasri Chaurasia; Shweta Lahudkar; Bhawana Uprety; Sukesh R Bhaumik
Journal:  Nucleic Acids Res       Date:  2011-12-22       Impact factor: 16.971

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  9 in total

1.  Eaf1p Is Required for Recruitment of NuA4 in Targeting TFIID to the Promoters of the Ribosomal Protein Genes for Transcriptional Initiation In Vivo.

Authors:  Bhawana Uprety; Rwik Sen; Sukesh R Bhaumik
Journal:  Mol Cell Biol       Date:  2015-06-22       Impact factor: 4.272

2.  Preferential repair of DNA double-strand break at the active gene in vivo.

Authors:  Priyasri Chaurasia; Rwik Sen; Tej K Pandita; Sukesh R Bhaumik
Journal:  J Biol Chem       Date:  2012-08-21       Impact factor: 5.157

3.  Molecular basis of chromatin remodeling by Rhp26, a yeast CSB ortholog.

Authors:  Wei Wang; Jun Xu; Oliver Limbo; Jia Fei; George A Kassavetis; Jenny Chong; James T Kadonaga; Paul Russell; Bing Li; Dong Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2019-03-13       Impact factor: 11.205

Review 4.  Regulation of active genome integrity and expression by Rad26p.

Authors:  Shivani Malik; Sukesh R Bhaumik
Journal:  Nucleus       Date:  2014-10-31       Impact factor: 4.197

5.  Analysis of transcriptional profiles of Saccharomyces cerevisiae exposed to bisphenol A.

Authors:  Ceyhun Bereketoglu; Kazim Yalcin Arga; Serpil Eraslan; Bulent Mertoglu
Journal:  Curr Genet       Date:  2016-07-26       Impact factor: 3.886

6.  TOR Facilitates the Targeting of the 19S Proteasome Subcomplex To Enhance Transcription Complex Assembly at the Promoters of the Ribosomal Protein Genes.

Authors:  Bhawana Uprety; Amala Kaja; Sukesh R Bhaumik
Journal:  Mol Cell Biol       Date:  2018-06-28       Impact factor: 4.272

Review 7.  Chromatin modifications and DNA repair: beyond double-strand breaks.

Authors:  Nealia C M House; Melissa R Koch; Catherine H Freudenreich
Journal:  Front Genet       Date:  2014-09-05       Impact factor: 4.599

8.  Rrd1p, an RNA polymerase II-specific prolyl isomerase and activator of phosphoprotein phosphatase, promotes transcription independently of rapamycin response.

Authors:  Rwik Sen; Shivani Malik; Sarah Frankland-Searby; Bhawana Uprety; Shweta Lahudkar; Sukesh R Bhaumik
Journal:  Nucleic Acids Res       Date:  2014-08-11       Impact factor: 16.971

9.  UV-induced proteolysis of RNA polymerase II is mediated by VCP/p97 segregase and timely orchestration by Cockayne syndrome B protein.

Authors:  Jinshan He; Qianzheng Zhu; Gulzar Wani; Altaf A Wani
Journal:  Oncotarget       Date:  2017-02-14
  9 in total

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