Literature DB >> 22793370

On-chip synthesis of protein microarrays from DNA microarrays via coupled in vitro transcription and translation for surface plasmon resonance imaging biosensor applications.

Ting H Seefeld1, Aaron R Halpern, Robert M Corn.   

Abstract

Protein microarrays are fabricated from double-stranded DNA (dsDNA) microarrays by a one-step, multiplexed enzymatic synthesis in an on-chip microfluidic format and then employed for antibody biosensing measurements with surface plasmon resonance imaging (SPRI). A microarray of dsDNA elements (denoted as generator elements) that encode either a His-tagged green fluorescent protein (GFP) or a His-tagged luciferase protein is utilized to create multiple copies of mRNA (mRNA) in a surface RNA polymerase reaction; the mRNA transcripts are then translated into proteins by cell-free protein synthesis in a microfluidic format. The His-tagged proteins diffuse to adjacent Cu(II)-NTA microarray elements (denoted as detector elements) and are specifically adsorbed. The net result is the on-chip, cell-free synthesis of a protein microarray that can be used immediately for SPRI protein biosensing. The dual element format greatly reduces any interference from the nonspecific adsorption of enzyme or proteins. SPRI measurements for the detection of the antibodies anti-GFP and antiluciferase were used to verify the formation of the protein microarray. This convenient on-chip protein microarray fabrication method can be implemented for multiplexed SPRI biosensing measurements in both clinical and research applications.

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Year:  2012        PMID: 22793370      PMCID: PMC3415242          DOI: 10.1021/ja304187r

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  31 in total

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Authors:  Eric Phizicky; Philippe I H Bastiaens; Heng Zhu; Michael Snyder; Stanley Fields
Journal:  Nature       Date:  2003-03-13       Impact factor: 49.962

Review 2.  Current and prospective applications of metal ion-protein binding.

Authors:  E K M Ueda; P W Gout; L Morganti
Journal:  J Chromatogr A       Date:  2003-02-21       Impact factor: 4.759

Review 3.  Protein microarrays: promising tools for proteomic research.

Authors:  Markus F Templin; Dieter Stoll; Jochen M Schwenk; Oliver Pötz; Stefan Kramer; Thomas O Joos
Journal:  Proteomics       Date:  2003-11       Impact factor: 3.984

Review 4.  Protein microarrays as tools for functional proteomics.

Authors:  Joshua LaBaer; Niroshan Ramachandran
Journal:  Curr Opin Chem Biol       Date:  2005-02       Impact factor: 8.822

Review 5.  Small molecule microarrays: recent advances and applications.

Authors:  Mahesh Uttamchandani; Daniel P Walsh; Shao Q Yao; Young-Tae Chang
Journal:  Curr Opin Chem Biol       Date:  2005-02       Impact factor: 8.822

6.  Regeneration of adenosine triphosphate from glycolytic intermediates for cell-free protein synthesis.

Authors:  D M Kim; J R Swartz
Journal:  Biotechnol Bioeng       Date:  2001-08-20       Impact factor: 4.530

7.  DNA-directed peptide synthesis. II. The synthesis of the alpha-fragment of the enzyme beta-galactosidase.

Authors:  J K DeVries; G Zubay
Journal:  Proc Natl Acad Sci U S A       Date:  1967-04       Impact factor: 11.205

8.  On-chip synthesis of RNA aptamer microarrays for multiplexed protein biosensing with SPR imaging measurements.

Authors:  Yulin Chen; Kohei Nakamoto; Osamu Niwa; Robert M Corn
Journal:  Langmuir       Date:  2012-04-02       Impact factor: 3.882

9.  Self-assembling protein microarrays.

Authors:  Niroshan Ramachandran; Eugenie Hainsworth; Bhupinder Bhullar; Samuel Eisenstein; Benjamin Rosen; Albert Y Lau; Johannes C Walter; Joshua LaBaer
Journal:  Science       Date:  2004-07-02       Impact factor: 47.728

10.  Microspotting streptavidin and double-stranded DNA arrays on gold for high-throughput studies of protein-DNA interactions by surface plasmon resonance microscopy.

Authors:  Jennifer S Shumaker-Parry; M Hadi Zareie; Ruedi Aebersold; Charles T Campbell
Journal:  Anal Chem       Date:  2004-02-15       Impact factor: 6.986

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  7 in total

1.  A Microwell-Printing Fabrication Strategy for the On-Chip Templated Biosynthesis of Protein Microarrays for Surface Plasmon Resonance Imaging.

Authors:  Gerald Manuel; Andrej Lupták; Robert M Corn
Journal:  J Phys Chem C Nanomater Interfaces       Date:  2016-05-10       Impact factor: 4.126

2.  Integration of cell-free protein synthesis and purification in one microfluidic chip for on-demand production of recombinant protein.

Authors:  Xiao Xiao; Yuan Zhou; Yuqiong Sun; Qing Wang; Jianbo Liu; Jin Huang; Xiaobei Zhu; Xiaohai Yang; Kemin Wang
Journal:  Biomicrofluidics       Date:  2018-09-13       Impact factor: 2.800

3.  Surface Enzyme Chemistries for Ultrasensitive Microarray Biosensing with SPR Imaging.

Authors:  Jennifer B Fasoli; Robert M Corn
Journal:  Langmuir       Date:  2015-02-10       Impact factor: 3.882

Review 4.  Bottom-Up Synthesis and Sensor Applications of Biomimetic Nanostructures.

Authors:  Li Wang; Yujing Sun; Zhuang Li; Aiguo Wu; Gang Wei
Journal:  Materials (Basel)       Date:  2016-01-18       Impact factor: 3.623

Review 5.  Cell-Free Approaches in Synthetic Biology Utilizing Microfluidics.

Authors:  Samar Damiati; Rami Mhanna; Rimantas Kodzius; Eva-Kathrin Ehmoser
Journal:  Genes (Basel)       Date:  2018-03-06       Impact factor: 4.096

6.  Quantification of epidermal growth factor receptor expression level and binding kinetics on cell surfaces by surface plasmon resonance imaging.

Authors:  Fenni Zhang; Shaopeng Wang; Linliang Yin; Yunze Yang; Yan Guan; Wei Wang; Han Xu; Nongjian Tao
Journal:  Anal Chem       Date:  2015-10-06       Impact factor: 6.986

7.  Real-time, label-free detection of biomolecular interactions in sandwich assays by the oblique-incidence reflectivity difference technique.

Authors:  Yung-Shin Sun; Xiangdong Zhu
Journal:  Sensors (Basel)       Date:  2014-12-05       Impact factor: 3.576

  7 in total

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