| Literature DB >> 22787426 |
Steven J Wagstaff1, Beverley R Clarkson.
Abstract
The genus Empodisma comprises two species that are ecologically important in wetland habitats. Empodisma gracillimum is restricted to south-western Australia, whereas Empodisma minus is found in Tasmania, eastern Australia and New Zealand. We sequenced three cpDNA genes for 15 individuals of Empodisma sampled from throughout the range of the species. The results support an Australian origin for Empodisma sometime during the late Oligocene to early Miocene with more recent dispersal, colonization and diversification in New Zealand. We recovered six genetically distinct maternal lineages: three Empodisma gracillimum haplotypes corresponding to the three accessions in our analysis, a wide-ranging Empodisma minus haplotype found in eastern Australia and Tasmania, an Empodisma minus haplotype found in New Zealand from Stewart Island to approximately 38° S latitude on the North Island, and a distinct haplotype restricted to the North Island of New Zealand north of 38° S latitude. The Eastern Australian and New Zealand haplotypes of Empodisma minus were supported by only one cpDNA gene, and we felt the relatively minor morphological differences and the small amount of genetic divergence did not warrant taxonomic recognition. However, we recommend that the northern New Zealand haplotype should be recognized as the new species Empodisma robustum and provide descriptions and a key to the species of Empodisma. Monophyly of Empodisma robustum is supported by all three cpDNA genes. Empodisma robustum can be distinguished from Empodisma gracillimum and Empodisma minus by its robust growth stature and distinct ecology. It is typically eliminated by fire and re-establishes by seed (seeder strategy), whereas Empodisma minus and Empodisma gracillimum regrow after fire (sprouter strategy).Entities:
Keywords: Empodisma; New Zealand; Restionaceae; new species; taxonomy
Year: 2012 PMID: 22787426 PMCID: PMC3391716 DOI: 10.3897/phytokeys.13.3259
Source DB: PubMed Journal: PhytoKeys ISSN: 1314-2003 Impact factor: 1.635
Figure 1.Map showing the generalized distribution of in Australia and New Zealand and the collection localities of the DNA samples included in our study. The approximate position of the kauri line in New Zealand is shown with a dashed line.
Figure 6.Box plots illustrating patterns of morphological variation among the species of . The box spans the interquartile range of the values in the variate. The middle 50% of the data lie within the box, with a line showing the median. The whiskers extend beyond the ends of the box as far as the minimum and maximum values.
Figure 2.Strict consensus tree. The three species of (highlighted in bold) emerge as a well-supported clade distinct from and . They were placed in these latter two genera by Moore and Edgar (1970) and Cheeseman (1906). Bootstrap values are provided above the branches
Figure 3.Bayesian chronogram with estimated divergence times. Node error bars are provided in blue showing the 95% highest probability density for the divergence estimates. Posterior probability support values > 97% are given above the branches. A geological time scale is shown at the base of the tree.
Figure 4.Comparison of median networks from independent analyses of trnL, rbcL and matK sequences. Bootstrap values / the number of mutations distinguishing each haplotype. are shown beside the branches. The accessions of from New Zealand are indicated NZ and Australia Aus.
Figure 5.Unrooted parsimony tree from a combined analysis of the three sequence partitions. Six distinct cpDNA haplotypes are supported. Bootstrap values / the number of mutations distinguishing each haplotype are shown beside the branches. The accessions of from New Zealand are indicated NZ and Australia Aus.
Figure 7.Principal coordinates ordination depicting patterns of overall similarity among the 74 OTEs that comprised our morphological sample. The first PC axis accounted for 58.3% of the variation in our sample and the second PC axis accounted for 23. 4% of the variation.
Figure 8.Type of , N56 R. Mason, N.T. Moar 6750, 6/12/1958, CHR11159.
Figure 9.Morphological characteristics of . A Vegetative shoot with attached leaves and flowers (actual size) B Rhizomes with emerging vegetative shoots (2.5× actual size) C Vegetative shoot with attached pistillate flower D Pistillate flower with attached bracts E Gynoecium F Mature nut G Vegetative shoot with attached staminate spikelet H Staminate flower with attached bracts I Staminate flower. Scale bar = 1 mm.
Figure 10.High resolution photograph of the lectotype of (Hook.f.) L.A.S. Johnson & D.F.Cutler. Reproduced with the consent of the Royal Botanic Gardens, Kew, © The Board of Trustees of the Royal Botanic Gardens. Hooker (1853) described the new species Hook.f. based upon Bidwell, Colenso and Lyall specimens. A specimen collected near Nelson by Bidwell, no. 84, K000441989, was chosen as the lectotype by Moore and Edgar (1970).
Figure 11.Morphological characteristics of . A Vegetative shoot with attached leaves and flowers (2.5× actual size) B Rhizomes with emerging vegetative shoots (2.5× actual size) C Vegetative shoot with attached pistillate flower D Pistillate flower with attached bracts E Gynoecium F Mature nut G Vegetative shoot with attached staminate spikelet H Staminate flower with attached bracts I Staminate flower. Scale bar = 1 mm.
Figure 12.High resolution photograph of a syntype of (F.Muell.) L.A.S. Johnson & D.F.Cutler. Mueller (1872–74) originally described the plant as F.Muell. The specimen, Nouvelle-Hollande, Riv. des cygnes, Preiss JA 1711, 1843, P00748711 is held at HERBARIUM MUSEI PARISIENSIS. The syntype was designated by BG Briggs xi.1998.
| 1 | Robust plants forming dense tangled thickets; culms > 1 mm in diameter at base of the plant; sheaths mostly >7.5 mm long; spikelets > 6.0 mm long | |
| – | Slender and/or diminutive plants; culms mostly < 1 mm in diameter, sheaths mostly < 7.5 mm long; spikelets generally < 6.0 mm | 2. |
| 2 | Culms dark green, 18–80 cm in height (some plants rarely to 1.2 m in Eastern Australia); female spikelets sessile to shortly pedicellate | 2. |
| – | Culms light green, 55–130 cm in height; spikelets borne on pedicels up to 20 mm long | 3. |
Voucher specimens listing country of origin, literature citations, Allan Herbarium accession numbers for new sequences, their collection locality, DNA accession number, and GenBank accession numbers.
| Australia | NSW 437369 | GQ409034 | GQ408918 | GQ408988 | ||||
| Australia | NSW 391527 | DQ257498 | AF148760 | AF148720 | ||||
| Australia | NSW 494422 | —<br/> | GQ408919 | — | ||||
| Chile | Los Lagos, Mehuín | CHR513924 | JX154568 | AF307923 | JX154570 | |||
| New Zealand | Westland, Wanganui River | CHR517317 | JX154569 | AF307924 | JX154571 | |||
| Australia | NSW365050 | DQ257501 | AF148761 | AF148721 | ||||
| Australia | NSW 264835 | GQ409036 | DQ257502 | AF148725 | ||||
| Australia | NSW 264698 | GQ409036 | GQ408930 | GQ408999 | ||||
| Australia | NSW 261929 | DQ257508 | AF148782 | AF148743 | ||||
| Australia | NSW 401500 | DQ257510 | GQ408923 | GQ408922 | ||||
| Australia | NSW 270162 | — | AF148763 | AF148723 | ||||
| Australia | NSW 270160 | — | AF148791 | AF148752 | ||||
| Australia | NSW 264839 | — | AF148762 | AF148722 | ||||
| Australia | NSW 401500 | GQ409023 | AF148769 | AF148730 | ||||
| Australia | NSW 338881 | — | AF148780 | AF148741 | ||||
| Australia | NSW 423447 | DQ257511 | AF148770 | AF148731 | ||||
| Australia | NSW 391321 | — | AF148771 | AF148732 | ||||
| Australia | This paper | Western Australia, Denmark | CHR 525963 | 9.14 | JX129074 | JX129095 | JX129133 | |
| Australia | This paper | Western Australia, Caldyannup land system | PERTH 07102399<br/> | 12.1 | JX129076 | JX129095 | JX129132 | |
| Australia | This paper | Western Australia, NE of Albany | PERTH 046385530<br/> | 12.2 | JX129075 | JX129097 | JX129131 | |
| Australia | This paper | Tasmania, Central Plateau, second lagoon | CHR 585759 | 7.45 | JX129080 | JX129101 | JX129116 | |
| Australia | This paper | Victoria, Mt. Buffalo | CHR 607930 | 9.15 | JX129090 | JX129111 | JX129117 | |
| New Zealand | This paper | Waipapa EA, Pureora | CHR 605145 | 9.04 | JX129087 | JX129108 | JX129119 | |
| New Zealand | This paper | Lookout Range | CHR 605066 | 8.09 | JX129085 | JX129106 | JX129120 | |
| New Zealand | This paper | Herangi Range, top | CHR 596548 | 8.08 | JX129084 | JX129105 | JX129121 | |
| New Zealand | This paper | Taramoa | CHR 605065 | 8.01 | JX129081 | JX129102 | JX129122 | |
| New Zealand | This paper | Stewart Island, Mason Bay | CHR 605074 | 7.40 | JX129077 | JX129098<br/> | JX129123 | |
| New Zealand | This paper | Pukerau Red Tussock Reserve | CHR 605847 | 9.05 | JX129088 | JX129109 | JX129118 | |
| New Zealand | This paper | Whangamarino | CHR 605067 | 11.01 | JX129091 | JX129112 | JX129124 | |
| New Zealand | This paper | Opuatia | CHR 605068 | 7.44 | JX129079 | JX129100 | JX129129 | |
| New Zealand | This paper | Moanatuatua Swamp | CHR 605165 | 9.06 | JX129089 | JX129110 | JX129125 | |
| New Zealand | This paper | Northland, Tangonge | CHR 605064 | 8.03 | JX129082 | JX129103 | JX129128 | |
| New Zealand | This paper | Lake Tomarata | CHR 605069 | 7.43 | JX129078 | JX129099 | JX129130 | |
| New Zealand | This paper | Kaimaumau | CHR 605063 | 8.06 | JX129083 | JX129104 | JX129127 | |
| New Zealand | This paper | Torehape Bog | CHR 605167 | 9.01 | JX129086 | JX129107 | JX129126 | |
| Australia | NSW 264949 | DQ257514 | AF148790 | AF148751 | ||||
| Australia | NSW 423455 | GQ409020 | AF148776 | AF148737 | ||||
| Australia | NSW 364372 | DQ257519 | AF148727 | AF148738 | ||||
| Australia | NSW 364832 | — | GQQ408927 | — | ||||
| Australia | NSW 714757 | — | — | GQ408962 | ||||
| Australia | NSW 714454 | GQ409046 | — | GQ409963 | ||||
| Australia | NSW 714451 | — | — | GQ408964 | ||||
| Australia | <br/> | NSW 391535 | — | AF148778 | AF148739 | |||
| Australia | NSW 364813 | — | AF148779 | AF148740 | ||||
| Australia | NSW 264954 | GQ409039 | AF148781 | AF148742 | ||||
| Australia | NSW 423726 | — | AF148785 | AF148746 | ||||
| Australia | NSW 364738 | — | AF148786 | AF148747 | ||||
| Australia | NSW 391339 | DQ257523 | AF148787 | AF148748 | ||||
| Australia | NSW 261610 | GQ409043 | AF148284 | AF148745 | ||||
| Australia | NSW 232599 | GQ409035 | AF148788 | AF148749 | ||||
| Africa | Linder, Hardy and Moline 7327 | AY881540 | AY881467 | AY881613 | ||||
| New Zealand | This paper | South Auckland; Moanatuatua Swamp | CHR 605163 | 9.10 | JX129093 | JX129114 | JX129135 | |
| New Zealand | This paper | South Auckland; Kopuati | CHR 604580 | 8.56 | JX129092 | JX129113 | JX129134 | |
| Australia | NSW 270154 | GQ409027 | DQ257526 | GQ409013 | ||||
| Australia | NSW 264956 | GQ409028 | AF148793 | AF148754 | ||||
| New Zealand | This paper | Chatham Islands; Rakautahi | CHR 605164 | 9.08 | JX129094 | JX129115 | JX129136 | |
| Australia | NSW 270154 | GQ409027 | DQ257526 | GQ409013 | ||||
| Australia | NSW 264956 | GQ409028 | AF148793 | AF148754 | ||||
| Australia | NSW 261641 | GQ409037 | AF148795 | AF148756 | ||||
| Australia | NSW 713239 | GQ409021 | AF148796 | AF148758 |