Literature DB >> 22787270

Complete genome sequence of Celeribacter bacteriophage P12053L.

Ilnam Kang1, Hani Jang, Hyun-Myung Oh, Jang-Cheon Cho.   

Abstract

The Roseobacter clade has been recognized as one of the abundant bacterial lineages in marine environments, which makes the characterization of bacteriophages infecting members of the clade important. Here we report the complete genome sequence of bacteriophage P12053L, which infects Celeribacter sp. strain IMCC12053, a member of the Roseobacter clade.

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Year:  2012        PMID: 22787270      PMCID: PMC3421633          DOI: 10.1128/JVI.01153-12

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  17 in total

1.  Velvet: algorithms for de novo short read assembly using de Bruijn graphs.

Authors:  Daniel R Zerbino; Ewan Birney
Journal:  Genome Res       Date:  2008-03-18       Impact factor: 9.043

Review 2.  Marine viruses--major players in the global ecosystem.

Authors:  Curtis A Suttle
Journal:  Nat Rev Microbiol       Date:  2007-10       Impact factor: 60.633

3.  Genome characteristics of a generalist marine bacterial lineage.

Authors:  Ryan J Newton; Laura E Griffin; Kathy M Bowles; Christof Meile; Scott Gifford; Carrie E Givens; Erinn C Howard; Eric King; Clinton A Oakley; Chris R Reisch; Johanna M Rinta-Kanto; Shalabh Sharma; Shulei Sun; Vanessa Varaljay; Maria Vila-Costa; Jason R Westrich; Mary Ann Moran
Journal:  ISME J       Date:  2010-01-14       Impact factor: 10.302

4.  Genomic analysis of multiple Roseophage SIO1 strains.

Authors:  Florent Angly; Merry Youle; Bahador Nosrat; Shailaja Srinagesh; Beltran Rodriguez-Brito; Patrick McNairnie; Gordafaried Deyanat-Yazdi; Mya Breitbart; Forest Rohwer
Journal:  Environ Microbiol       Date:  2009-07-31       Impact factor: 5.491

5.  Gene transfer by transduction in the marine environment.

Authors:  S C Jiang; J H Paul
Journal:  Appl Environ Microbiol       Date:  1998-08       Impact factor: 4.792

6.  Consed: a graphical tool for sequence finishing.

Authors:  D Gordon; C Abajian; P Green
Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

7.  Bacteriophages drive strain diversification in a marine Flavobacterium: implications for phage resistance and physiological properties.

Authors:  Mathias Middelboe; Karin Holmfeldt; Lasse Riemann; Ole Nybroe; Jakob Haaber
Journal:  Environ Microbiol       Date:  2009-03-31       Impact factor: 5.491

8.  The marine viromes of four oceanic regions.

Authors:  Florent E Angly; Ben Felts; Mya Breitbart; Peter Salamon; Robert A Edwards; Craig Carlson; Amy M Chan; Matthew Haynes; Scott Kelley; Hong Liu; Joseph M Mahaffy; Jennifer E Mueller; Jim Nulton; Robert Olson; Rachel Parsons; Steve Rayhawk; Curtis A Suttle; Forest Rohwer
Journal:  PLoS Biol       Date:  2006-11       Impact factor: 8.029

9.  Genome sequences of two novel phages infecting marine roseobacters.

Authors:  Yanlin Zhao; Kui Wang; Nianzhi Jiao; Feng Chen
Journal:  Environ Microbiol       Date:  2009-08       Impact factor: 5.491

10.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969

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  14 in total

Review 1.  Metaviromics coupled with phage-host identification to open the viral 'black box'.

Authors:  Kira Moon; Jang-Cheon Cho
Journal:  J Microbiol       Date:  2021-02-23       Impact factor: 3.422

2.  Characterization and Complete Genome Sequences of Three N4-Like Roseobacter Phages Isolated from the South China Sea.

Authors:  Baolian Li; Si Zhang; Lijuan Long; Sijun Huang
Journal:  Curr Microbiol       Date:  2016-06-07       Impact factor: 2.188

3.  Complete genome sequence of Roseophage vB_DshP-R1, which infects Dinoroseobacter shibae DFL12.

Authors:  Jianda Ji; Rui Zhang; Nianzhi Jiao
Journal:  Stand Genomic Sci       Date:  2015-01-21

4.  A Novel Roseosiphophage Isolated from the Oligotrophic South China Sea.

Authors:  Yunlan Yang; Lanlan Cai; Ruijie Ma; Yongle Xu; Yigang Tong; Yong Huang; Nianzhi Jiao; Rui Zhang
Journal:  Viruses       Date:  2017-05-15       Impact factor: 5.048

5.  Genomic, proteomic and bioinformatic analysis of two temperate phages in Roseobacter clade bacteria isolated from the deep-sea water.

Authors:  Kai Tang; Dan Lin; Qiang Zheng; Keshao Liu; Yujie Yang; Yu Han; Nianzhi Jiao
Journal:  BMC Genomics       Date:  2017-06-27       Impact factor: 3.969

6.  Complete genome sequence of Roseophage vB_DshP-R1, which infects Dinoroseobacter shibae DFL12.

Authors:  Jianda Ji; Rui Zhang; Nianzhi Jiao
Journal:  Stand Genomic Sci       Date:  2015-01-21

7.  Identification of structural and morphogenesis genes of Pseudoalteromonas phage φRIO-1 and placement within the evolutionary history of Podoviridae.

Authors:  Stephen C Hardies; Julie A Thomas; Lindsay Black; Susan T Weintraub; Chung Y Hwang; Byung C Cho
Journal:  Virology       Date:  2015-12-31       Impact factor: 3.616

8.  Metagenomic Analysis of Virioplankton of the Subtropical Jiulong River Estuary, China.

Authors:  Lanlan Cai; Rui Zhang; Ying He; Xiaoyuan Feng; Nianzhi Jiao
Journal:  Viruses       Date:  2016-02-02       Impact factor: 5.048

9.  Complete genome sequence of Paracoccus marcusii phage vB_PmaS-R3 isolated from the South China Sea.

Authors:  Yongle Xu; Rui Zhang; Nianzhi Jiao
Journal:  Stand Genomic Sci       Date:  2015-11-10

10.  Complete genome sequences of bacteriophages P12002L and P12002S, two lytic phages that infect a marine Polaribacter strain.

Authors:  Ilnam Kang; Hani Jang; Jang-Cheon Cho
Journal:  Stand Genomic Sci       Date:  2015-10-19
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