Literature DB >> 22783572

Comprehensive analysis of BCR/ABL variants in chronic myeloid leukemia patients using multiplex RT-PCR.

Ayda Bennour1, Ines Ouahchi, Medhaffar Moez, Moez Elloumi, Abderrahim Khelif, Ali Saad, Halima Sennana.   

Abstract

BACKGROUND: A specific chromosomal abnormality, the Philadelphia chromosome (Ph), is present in 90 - 95% of patients with chronic myeloid leukemia (CML). This aberration results from a reciprocal translocation between chromosomes 9 and 22, creating a BCR/ABL fusion gene. The diagnosis of CML is based on the detection of BCR/ABL gene or Ph chromosome. Fusion proteins with different sizes are encoded depending on the breakpoint in the BCR gene. In general, 3 breakpoint cluster regions in the BCR gene have been described: major (M-bcr), minor (m-bcr), and micro (micro-bcr). The aim of this study was to search the BCR/ABL fusion gene in 60 Tunisian patients using multiplex reverse transcription polymerase chain reaction (RT-PCR) and compare our results with those of conventional cytogenetics.
METHODS: Bone marrow (BM) or peripheral blood (PB) samples, obtained at diagnosis, from 60 patients were analyzed by multiplex RT-PCR and conventional cytogenetics.
RESULTS: 45 patients examined were positive for some type of BCR/ABL rearrangement. The majority of the patients (97.77%) expressed one of the p210 BCR-ABL transcripts (63% with b3a2 and 36% with b2a2) while only one patient showed a rare e19a2 transcript.
CONCLUSIONS: Multiplex RT-PCR is a fast and reliable technique for improved detection of typical and atypical BCR/ABL transcripts.

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Year:  2012        PMID: 22783572

Source DB:  PubMed          Journal:  Clin Lab        ISSN: 1433-6510            Impact factor:   1.138


  6 in total

Review 1.  Hypothesis: Artifacts, Including Spurious Chimeric RNAs with a Short Homologous Sequence, Caused by Consecutive Reverse Transcriptions and Endogenous Random Primers.

Authors:  Zhiyu Peng; Chengfu Yuan; Lucas Zellmer; Siqi Liu; Ningzhi Xu; D Joshua Liao
Journal:  J Cancer       Date:  2015-05-01       Impact factor: 4.207

Review 2.  Considerations for accurate gene expression measurement by reverse transcription quantitative PCR when analysing clinical samples.

Authors:  Rebecca Sanders; Deborah J Mason; Carole A Foy; Jim F Huggett
Journal:  Anal Bioanal Chem       Date:  2014-05-25       Impact factor: 4.142

Review 3.  It Is Imperative to Establish a Pellucid Definition of Chimeric RNA and to Clear Up a Lot of Confusion in the Relevant Research.

Authors:  Chengfu Yuan; Yaping Han; Lucas Zellmer; Wenxiu Yang; Zhizhong Guan; Wenfeng Yu; Hai Huang; D Joshua Liao
Journal:  Int J Mol Sci       Date:  2017-03-28       Impact factor: 5.923

4.  DNA Nanotweezers with Hydrolytic Activity for Enzyme-Free and Sensitive Detection of Fusion Gene via Logic Operation.

Authors:  Yongjie Xu; Xiangrong Luo; Nana Geng; Mingsong Wu; Zhishun Lu
Journal:  J Anal Methods Chem       Date:  2018-10-18       Impact factor: 2.193

5.  Frequency of BCR-ABL Transcript Types in Syrian CML Patients.

Authors:  Sulaf Farhat-Maghribi; Wafa Habbal; Fawza Monem
Journal:  J Oncol       Date:  2016-05-30       Impact factor: 4.375

6.  Bis-three-way junction nanostructure and DNA machineries for ultrasensitive and specific detection of BCR/ABL fusion gene by chemiluminescence imaging.

Authors:  Yongjie Xu; Xintong Bian; Ye Sang; Yujian Li; Dandan Li; Wei Cheng; Yibing Yin; Huangxian Ju; Shijia Ding
Journal:  Sci Rep       Date:  2016-08-31       Impact factor: 4.379

  6 in total

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