Literature DB >> 22782086

The reaction force constant: an indicator of the synchronicity in double proton transfer reactions.

Diana Yepes1, Jane S Murray, Peter Politzer, Pablo Jaque.   

Abstract

Earlier work, both experimental and computational, has drawn attention to the transition region in a chemical reaction, which includes the traditional transition state but extends along the intrinsic reaction coordinate ξ from perturbed forms of the reactants to perturbed forms of the products. The boundaries of this region are defined by the reaction force F(ξ), which is the negative gradient of the potential energy V(ξ) of the system along ξ. The reaction force constant κ(ξ), the second derivative of V(ξ), is negative throughout the transition region. We have now demonstrated, for a series of twelve double proton transfer processes, that the profile of κ(ξ) in the transition region is an indicator of the synchronicity of the two proton migrations in each case. When they are fully or nearly fully synchronous, κ(ξ) has a single minimum in the transition region. When the migrations are considerably nonsynchronous, κ(ξ) has two minima separated by a local maximum. Such an assessment of the degree of synchronicity cannot readily be made from an examination of the transition state alone, nor it is easily detected in the profiles of V(ξ) and F(ξ).

Year:  2012        PMID: 22782086     DOI: 10.1039/c2cp41064h

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  12 in total

1.  Hydration effect on proton transfer in melamine-cyanuric acid complex.

Authors:  Shihai Yan; Baotao Kang; Jin Yong Lee; Lixiang Sun
Journal:  J Mol Model       Date:  2016-06-28       Impact factor: 1.810

2.  Perspectives on the reaction force constant.

Authors:  Peter Politzer; Jane S Murray; Pablo Jaque
Journal:  J Mol Model       Date:  2013-01-05       Impact factor: 1.810

3.  Driving and retarding forces in a chemical reaction.

Authors:  Peter Politzer; Jane S Murray; Diana Yepes; Pablo Jaque
Journal:  J Mol Model       Date:  2014-07-19       Impact factor: 1.810

4.  Kudi: A free open-source python library for the analysis of properties along reaction paths.

Authors:  Stefan Vogt-Geisse
Journal:  J Mol Model       Date:  2016-04-23       Impact factor: 1.810

5.  Solvent effect on the degree of (a)synchronicity in polar Diels-Alder reactions from the perspective of the reaction force constant analysis.

Authors:  Diana Yepes; Jorge I Martínez-Araya; Pablo Jaque
Journal:  J Mol Model       Date:  2017-12-29       Impact factor: 1.810

6.  How does the presence of an oxyradical influence the behavior of polyphenolic antioxidant? A case study on gallic acid.

Authors:  Rakiba Rohman; Rahul Kar
Journal:  J Mol Model       Date:  2018-06-19       Impact factor: 1.810

7.  Water-assisted isomerization of the [H, C, N, O] system.

Authors:  Jia Cao; Zhi Xiang Wang; Lou Jun Gao; Feng Fu
Journal:  J Mol Model       Date:  2015-03-05       Impact factor: 1.810

8.  Variation of the electronic dipole polarizability on the reaction path.

Authors:  Mateusz Jędrzejewski; Piotr Ordon; Ludwik Komorowski
Journal:  J Mol Model       Date:  2013-03-23       Impact factor: 1.810

9.  Further understanding of the Ru-centered [2+2] cycloreversion/cycloaddition involved into the interconversion of ruthenacyclobutane using the Grubbs catalysts from a reaction force analysis.

Authors:  Katherine Paredes-Gil; Fernando Mendizábal; Pablo Jaque
Journal:  J Mol Model       Date:  2019-09-07       Impact factor: 1.810

10.  New Insights into the (A)Synchronicity of Diels-Alder Reactions: A Theoretical Study Based on the Reaction Force Analysis and Atomic Resolution of Energy Derivatives.

Authors:  Bienfait Kabuyaya Isamura; Kevin Alan Lobb
Journal:  Molecules       Date:  2022-02-25       Impact factor: 4.411

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