Literature DB >> 22781900

New lives for old: evolution of pseudoenzyme function illustrated by iRhoms.

Colin Adrain1, Matthew Freeman.   

Abstract

Large-scale sequencing of genomes has revealed that most enzyme families include inactive homologues. These pseudoenzymes are often well conserved, implying a selective pressure to retain them during evolution, and therefore that they have significant function. Mechanistic insights and evolutionary lessons are now emerging from the study of a broad range of such 'dead' enzymes. The recently discovered iRhoms - inactive homologues of rhomboid proteases - have joined derlins and other members of the rhomboid-like clan in regulating the fate of proteins as they pass through the secretory pathway. There is a strong case that dead enzymes, which have been rather overlooked, may be a rich source of biological regulators.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22781900     DOI: 10.1038/nrm3392

Source DB:  PubMed          Journal:  Nat Rev Mol Cell Biol        ISSN: 1471-0072            Impact factor:   94.444


  87 in total

1.  EphB6-null mutation results in compromised T cell function.

Authors:  Hongyu Luo; Guang Yu; Johanne Tremblay; Jiangping Wu
Journal:  J Clin Invest       Date:  2004-12       Impact factor: 14.808

2.  iRhom2 is required for the secretion of mouse TNFα.

Authors:  Owen M Siggs; Nengming Xiao; Ying Wang; Hexin Shi; Wataru Tomisato; Xiaohong Li; Yu Xia; Bruce Beutler
Journal:  Blood       Date:  2012-05-01       Impact factor: 22.113

Review 3.  Gathering STYX: phosphatase-like form predicts functions for unique protein-interaction domains.

Authors:  M J Wishart; J E Dixon
Journal:  Trends Biochem Sci       Date:  1998-08       Impact factor: 13.807

4.  Crystal structure of the ectodomain of human transferrin receptor.

Authors:  C M Lawrence; S Ray; M Babyonyshev; R Galluser; D W Borhani; S C Harrison
Journal:  Science       Date:  1999-10-22       Impact factor: 47.728

5.  ERp29 triggers a conformational change in polyomavirus to stimulate membrane binding.

Authors:  Brian Magnuson; Emily K Rainey; Thomas Benjamin; Mikhail Baryshev; Souren Mkrtchian; Billy Tsai
Journal:  Mol Cell       Date:  2005-10-28       Impact factor: 17.970

6.  Drosophila rhomboid-1 defines a family of putative intramembrane serine proteases.

Authors:  S Urban; J R Lee; M Freeman
Journal:  Cell       Date:  2001-10-19       Impact factor: 41.582

Review 7.  cFLIP regulation of lymphocyte activation and development.

Authors:  Ralph C Budd; Wen-Chen Yeh; Jürg Tschopp
Journal:  Nat Rev Immunol       Date:  2006-03       Impact factor: 53.106

Review 8.  Road to ruin: targeting proteins for degradation in the endoplasmic reticulum.

Authors:  Melanie H Smith; Hidde L Ploegh; Jonathan S Weissman
Journal:  Science       Date:  2011-11-25       Impact factor: 47.728

9.  Transferrin receptor-like proteins control the degradation of a yeast metal transporter.

Authors:  Helen E M Stimpson; Michael J Lewis; Hugh R B Pelham
Journal:  EMBO J       Date:  2006-02-02       Impact factor: 11.598

10.  Rhomboid family pseudoproteases use the ER quality control machinery to regulate intercellular signaling.

Authors:  Markus Zettl; Colin Adrain; Kvido Strisovsky; Viorica Lastun; Matthew Freeman
Journal:  Cell       Date:  2011-04-01       Impact factor: 41.582

View more
  63 in total

1.  Protein evolution: keeping BUBR1 intact.

Authors:  Rachel David
Journal:  Nat Rev Mol Cell Biol       Date:  2012-07-11       Impact factor: 94.444

2.  The enzymatic nature of an anonymous protein sequence cannot reliably be inferred from superfamily level structural information alone.

Authors:  Daniel Barry Roche; Thomas Brüls
Journal:  Protein Sci       Date:  2015-01-28       Impact factor: 6.725

3.  Human pantothenate kinase 4 is a pseudo-pantothenate kinase.

Authors:  Jiangwei Yao; Chitra Subramanian; Charles O Rock; Suzanne Jackowski
Journal:  Protein Sci       Date:  2019-04-17       Impact factor: 6.725

4.  Structural basis for functional cooperation between tandem helicase cassettes in Brr2-mediated remodeling of the spliceosome.

Authors:  Karine F Santos; Sina Mozaffari Jovin; Gert Weber; Vladimir Pena; Reinhard Lührmann; Markus C Wahl
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-08       Impact factor: 11.205

5.  iRhom2 controls the substrate selectivity of stimulated ADAM17-dependent ectodomain shedding.

Authors:  Thorsten Maretzky; David R McIlwain; Priya Darshinee A Issuree; Xue Li; Jordi Malapeira; Sadaf Amin; Philipp A Lang; Tak W Mak; Carl P Blobel
Journal:  Proc Natl Acad Sci U S A       Date:  2013-06-25       Impact factor: 11.205

6.  The pseudoenzyme PDX1.2 boosts vitamin B6 biosynthesis under heat and oxidative stress in Arabidopsis.

Authors:  Cyril Moccand; Svetlana Boycheva; Pedro Surriabre; Marina Tambasco-Studart; Maja Raschke; Markus Kaufmann; Teresa B Fitzpatrick
Journal:  J Biol Chem       Date:  2014-02-06       Impact factor: 5.157

Review 7.  Ocular cytochrome P450s and transporters: roles in disease and endobiotic and xenobiotic disposition.

Authors:  Mariko Nakano; Catherine M Lockhart; Edward J Kelly; Allan E Rettie
Journal:  Drug Metab Rev       Date:  2014-05-26       Impact factor: 4.518

Review 8.  The roles of intramembrane proteases in protozoan parasites.

Authors:  L David Sibley
Journal:  Biochim Biophys Acta       Date:  2013-12

9.  ADAM17 stabilizes its interacting partner inactive Rhomboid 2 (iRhom2) but not inactive Rhomboid 1 (iRhom1).

Authors:  Gisela Weskamp; Johanna Tüshaus; Daniel Li; Regina Feederle; Thorsten Maretzky; Steven Swendemann; Erik Falck-Pedersen; David R McIlwain; Tak W Mak; Jane E Salmon; Stefan F Lichtenthaler; Carl P Blobel
Journal:  J Biol Chem       Date:  2020-02-14       Impact factor: 5.157

Review 10.  The Expanding Landscape of Moonlighting Proteins in Yeasts.

Authors:  Carlos Gancedo; Carmen-Lisset Flores; Juana M Gancedo
Journal:  Microbiol Mol Biol Rev       Date:  2016-07-27       Impact factor: 11.056

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.