Literature DB >> 22780581

Stepwise Diels-Alder: more than just an oddity? A computational mechanistic study.

Mats Linder1, Tore Brinck.   

Abstract

We have employed hybrid DFT and SCS-MP2 calculations at the SMD-PCM-6-311++G(2d,2p)//6-31+G(d) level to investigate the relationship between three possible channels for forming a Diels-Alder adduct from a highly nucleophilic diene and moderately to highly electrophilic dienophiles. We discuss geometries optimized using the B3LYP and M06-2X functionals with the 6-31+(d) basis set. The transition states and intermediates are characterized on the basis of geometric and electronic properties, and we also address the possibility of predicting detectability of a zwitterionic intermediate based on its relative stability. Our results show that a conventional Diels-Alder transition state conformation yields intermediates in all four investigated cases, but that these are too short-lived to be detected experimentally for the less activated reactants. The stepwise trans pathway, beginning with a conjugate addition-like transition state, becomes increasingly competitive with more activated reactants and is indeed favored for the most electrophilic dienophiles. Addition of a trans diene leads to a dead-end as the trans intermediates have insurmountable rotation barriers that prohibit formation of the second bond, unless another, heterocyclic intermediate is formed. We also show that introduction of a hydrogen bond donating catalyst favors a stepwise pathway even for less activated dienophiles.

Entities:  

Year:  2012        PMID: 22780581     DOI: 10.1021/jo301176t

Source DB:  PubMed          Journal:  J Org Chem        ISSN: 0022-3263            Impact factor:   4.354


  6 in total

1.  Computational design of a Diels-Alderase from a thermophilic esterase: the importance of dynamics.

Authors:  Mats Linder; Adam Johannes Johansson; Tjelvar S G Olsson; John Liebeschuetz; Tore Brinck
Journal:  J Comput Aided Mol Des       Date:  2012-09-16       Impact factor: 3.686

2.  Solvent effect on the degree of (a)synchronicity in polar Diels-Alder reactions from the perspective of the reaction force constant analysis.

Authors:  Diana Yepes; Jorge I Martínez-Araya; Pablo Jaque
Journal:  J Mol Model       Date:  2017-12-29       Impact factor: 1.810

3.  On the catalytic effect of water in the intramolecular Diels–Alder reaction of quinone systems: a theoretical study.

Authors:  Jorge Soto-Delgado; Arie Aizman; Renato Contreras; Luis R Domingo
Journal:  Molecules       Date:  2012-11-20       Impact factor: 4.411

Review 4.  The iboga enigma: the chemistry and neuropharmacology of iboga alkaloids and related analogs.

Authors:  Rishab N Iyer; David Favela; Guoliang Zhang; David E Olson
Journal:  Nat Prod Rep       Date:  2021-03-04       Impact factor: 13.423

5.  Diels-Alder Reactivity of a Chiral Anthracene Template with Symmetrical and Unsymmetrical Dienophiles: A DFT Study.

Authors:  Jennifer P Hernández-Mancera; Francisco Núñez-Zarur; Ricardo Vivas-Reyes
Journal:  ChemistryOpen       Date:  2020-07-10       Impact factor: 2.911

6.  Biosynthesis of Grandione: An Example of Tandem Hetero Diels-Alder/Retro-Claisen Rearrangement Reaction?

Authors:  Ramiro F Quijano-Quiñones; Carolina S Castro-Segura; Gonzalo J Mena-Rejón; Mariana Quesadas-Rojas; David Cáceres-Castillo
Journal:  Molecules       Date:  2018-09-30       Impact factor: 4.411

  6 in total

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