Literature DB >> 2277236

The coalescent and the genealogical process in geographically structured population.

M Notohara1.   

Abstract

We shall extend Kingman's coalescent to the geographically structured population model with migration among colonies. It is described by a continuous-time Markov chain, which is proved to be a dual process of the diffusion process of stepping-stone model. We shall derive a system of equations for the spatial distribution of a common ancestor of sampled genes from colonies and the mean time to getting to one common ancestor. These equations are solved in three particular models; a two-population model, the island model and the one-dimensional stepping-stone model with symmetric nearest-neighbour migration.

Mesh:

Year:  1990        PMID: 2277236     DOI: 10.1007/bf00173909

Source DB:  PubMed          Journal:  J Math Biol        ISSN: 0303-6812            Impact factor:   2.259


  13 in total

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6.  Dual processes and an invariance result for exchangeable models in population genetics.

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7.  The strong-migration limit in geographically structured populations.

Authors:  T Nagylaki
Journal:  J Math Biol       Date:  1980-04       Impact factor: 2.259

8.  Convergence to genetically uniform state in stepping stone models of population genetics.

Authors:  M Notohara; T Shiga
Journal:  J Math Biol       Date:  1980-11       Impact factor: 2.259

9.  Lines of descent in the diffusion approximation of neutral Wright-Fisher models.

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Journal:  Theor Popul Biol       Date:  1980-02       Impact factor: 1.570

10.  The coalescent process in models with selection and recombination.

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Journal:  Genetics       Date:  1988-11       Impact factor: 4.562

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  60 in total

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4.  Consequences of recombination on traditional phylogenetic analysis.

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6.  Maximum-likelihood estimation of rates of recombination within mating-type regions.

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8.  A separation-of-timescales approach to the coalescent in a continuous population.

Authors:  Jon F Wilkins
Journal:  Genetics       Date:  2004-12       Impact factor: 4.562

9.  Using temporally spaced sequences to simultaneously estimate migration rates, mutation rate and population sizes in measurably evolving populations.

Authors:  Greg Ewing; Geoff Nicholls; Allen Rodrigo
Journal:  Genetics       Date:  2004-12       Impact factor: 4.562

10.  The structured ancestral selection graph and the many-demes limit.

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Journal:  Genetics       Date:  2004-11-01       Impact factor: 4.562

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