Literature DB >> 22771214

Mechanism of Cd2+ coordination during slow inactivation in potassium channels.

H Raghuraman1, Julio F Cordero-Morales, Vishwanath Jogini, Albert C Pan, Astrid Kollewe, Benoît Roux, Eduardo Perozo.   

Abstract

In K+ channels, rearrangements of the pore outer vestibule have been associated with C-type inactivation gating. Paradoxically, the crystal structure of Open/C-type inactivated KcsA suggests these movements to be modest in magnitude. In this study, we show that under physiological conditions, the KcsA outer vestibule undergoes relatively large dynamic rearrangements upon inactivation. External Cd2+ enhances the rate of C-type inactivation in an cysteine mutant (Y82C) via metal-bridge formation. This effect is not present in a non-inactivating mutant (E71A/Y82C). Tandem dimer and tandem tetramer constructs of equivalent cysteine mutants in KcsA and Shaker K+ channels demonstrate that these Cd2+ metal bridges are formed only between adjacent subunits. This is well supported by molecular dynamics simulations. Based on the crystal structure of Cd2+ -bound Y82C-KcsA in the closed state, together with electron paramagnetic resonance distance measurements in the KcsA outer vestibule, we suggest that subunits must dynamically come in close proximity as the channels undergo inactivation.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 22771214      PMCID: PMC3846092          DOI: 10.1016/j.str.2012.03.027

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  59 in total

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Authors:  G Yellen
Journal:  Q Rev Biophys       Date:  1998-08       Impact factor: 5.318

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Authors:  Thomas W Claydon; Samy Y Makary; Katharine M Dibb; Mark R Boyett
Journal:  J Biol Chem       Date:  2003-10-02       Impact factor: 5.157

3.  A gate in the selectivity filter of potassium channels.

Authors:  Simon Bernèche; Benoît Roux
Journal:  Structure       Date:  2005-04       Impact factor: 5.006

Review 4.  A structural interpretation of voltage-gated potassium channel inactivation.

Authors:  Harley T Kurata; David Fedida
Journal:  Prog Biophys Mol Biol       Date:  2005-11-08       Impact factor: 3.667

5.  Two types of inactivation in Shaker K+ channels: effects of alterations in the carboxy-terminal region.

Authors:  T Hoshi; W N Zagotta; R W Aldrich
Journal:  Neuron       Date:  1991-10       Impact factor: 17.173

6.  Molecular dynamics of the KcsA K(+) channel in a bilayer membrane.

Authors:  S Bernèche; B Roux
Journal:  Biophys J       Date:  2000-06       Impact factor: 4.033

7.  Structural dynamics of the Streptomyces lividans K+ channel (SKC1): oligomeric stoichiometry and stability.

Authors:  D M Cortes; E Perozo
Journal:  Biochemistry       Date:  1997-08-19       Impact factor: 3.162

8.  Dynamic rearrangement of the outer mouth of a K+ channel during gating.

Authors:  Y Liu; M E Jurman; G Yellen
Journal:  Neuron       Date:  1996-04       Impact factor: 17.173

9.  Cooperative subunit interactions in C-type inactivation of K channels.

Authors:  E M Ogielska; W N Zagotta; T Hoshi; S H Heinemann; J Haab; R W Aldrich
Journal:  Biophys J       Date:  1995-12       Impact factor: 4.033

10.  Protein dynamics and monomer-monomer interactions in AntR activation by electron paramagnetic resonance and double electron-electron resonance.

Authors:  K Ilker Sen; Timothy M Logan; Piotr G Fajer
Journal:  Biochemistry       Date:  2007-09-19       Impact factor: 3.162

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  15 in total

1.  Pore helices play a dynamic role as integrators of domain motion during Kv11.1 channel inactivation gating.

Authors:  Matthew D Perry; Chai Ann Ng; Jamie I Vandenberg
Journal:  J Biol Chem       Date:  2013-03-07       Impact factor: 5.157

2.  Dynamics transitions at the outer vestibule of the KcsA potassium channel during gating.

Authors:  H Raghuraman; Shahidul M Islam; Soumi Mukherjee; Benoit Roux; Eduardo Perozo
Journal:  Proc Natl Acad Sci U S A       Date:  2014-01-15       Impact factor: 11.205

3.  Inactivation in the potassium channel KcsA.

Authors:  Yunyao Xu; Ann E McDermott
Journal:  J Struct Biol X       Date:  2019-06-12

4.  Structural Dynamics of the Paddle Motif Loop in the Activated Conformation of KvAP Voltage Sensor.

Authors:  Anindita Das; Satyaki Chatterjee; H Raghuraman
Journal:  Biophys J       Date:  2019-08-22       Impact factor: 4.033

5.  C-type inactivation of voltage-gated K+ channels: pore constriction or dilation?

Authors:  Toshinori Hoshi; Clay M Armstrong
Journal:  J Gen Physiol       Date:  2013-01-14       Impact factor: 4.086

6.  Voltage- and ATP-dependent structural rearrangements of the P2X2 receptor associated with the gating of the pore.

Authors:  Batu Keceli; Yoshihiro Kubo
Journal:  J Physiol       Date:  2014-08-28       Impact factor: 5.182

7.  A glimpse into the C-type-inactivated state for a Potassium Channel.

Authors:  Francis I Valiyaveetil
Journal:  Nat Struct Mol Biol       Date:  2017-10-05       Impact factor: 15.369

8.  Biochemical and biophysical characterization of a prokaryotic Mg2+ ion channel: Implications for cost-effective purification of membrane proteins.

Authors:  Satyaki Chatterjee; Anindita Das; H Raghuraman
Journal:  Protein Expr Purif       Date:  2019-04-24       Impact factor: 1.650

Review 9.  Novel insights in linking solvent relaxation dynamics and protein conformations utilizing red edge excitation shift approach.

Authors:  Rupasree Brahma; H Raghuraman
Journal:  Emerg Top Life Sci       Date:  2021-05-14

10.  Gating-related Structural Dynamics of the MgtE Magnesium Channel in Membrane-Mimetics Utilizing Site-Directed Tryptophan Fluorescence.

Authors:  Satyaki Chatterjee; Rupasree Brahma; H Raghuraman
Journal:  J Mol Biol       Date:  2020-10-22       Impact factor: 5.469

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