Literature DB >> 22765920

Perspectives on the structure-function of ABC transporters: the Switch and Constant Contact models.

Anthony M George1, Peter M Jones.   

Abstract

ABC transporters constitute one of the largest protein families across the kingdoms of archaea, eubacteria and eukarya. They couple ATP hydrolysis to vectorial translocation of diverse substrates across membranes. The ABC transporter architecture comprises two transmembrane domains and two cytosolic ATP-binding cassettes. During 2002-2012, nine prokaryotic ABC transporter structures and two eukaryotic structures have been solved to medium resolution. Despite a wealth of biochemical, biophysical, and structural data, fundamental questions remain regarding the coupling of ATP hydrolysis to unidirectional substrate translocation, and the mechanistic suite of steps involved. The mechanics of the ATP cassette dimer is defined most popularly by the 'Switch Model', which proposes that hydrolysis in each protomer is sequential, and that as the sites are freed of nucleotide, the protomers lose contact across a large solvent-filled gap of 20-30 Å; as captured in several X-ray solved structures. Our 'Constant Contact' model for the operational mechanics of ATP binding and hydrolysis in the ATP-binding cassettes is derived from the 'alternating sites' model, proposed in 1995, and which requires an intrinsic asymmetry in the ATP sites, but does not require the partner protomers to lose contact. Thus one of the most debated issues regarding the function of ABC transporters is whether the cooperative mechanics of ATP hydrolysis requires the ATP cassettes to separate or remain in constant contact and this dilemma is discussed at length in this review.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 22765920     DOI: 10.1016/j.pbiomolbio.2012.06.003

Source DB:  PubMed          Journal:  Prog Biophys Mol Biol        ISSN: 0079-6107            Impact factor:   3.667


  40 in total

1.  Direct Spectroscopic Detection of ATP Turnover Reveals Mechanistic Divergence of ABC Exporters.

Authors:  Alberto Collauto; Smriti Mishra; Aleksei Litvinov; Hassane S Mchaourab; Daniella Goldfarb
Journal:  Structure       Date:  2017-07-14       Impact factor: 5.006

Review 2.  Mechanistic diversity in ATP-binding cassette (ABC) transporters.

Authors:  Kaspar P Locher
Journal:  Nat Struct Mol Biol       Date:  2016-06-07       Impact factor: 15.369

3.  The ABC exporter MsbA probed by solid state NMR – challenges and opportunities.

Authors:  Hundeep Kaur; Andrea Lakatos; Roberta Spadaccini; Ramona Vogel; Christian Hoffmann; Johanna Becker-Baldus; Olivier Ouari; Paul Tordo; Hassane Mchaourab; Clemens Glaubitz
Journal:  Biol Chem       Date:  2015-09       Impact factor: 3.915

Review 4.  Role of ABC transporters in lipid transport and human disease.

Authors:  Elizabeth J Tarling; Thomas Q de Aguiar Vallim; Peter A Edwards
Journal:  Trends Endocrinol Metab       Date:  2013-02-14       Impact factor: 12.015

5.  Heme Binding by Corynebacterium diphtheriae HmuT: Function and Heme Environment.

Authors:  Elizabeth B Draganova; Neval Akbas; Seth A Adrian; Gudrun S Lukat-Rodgers; Daniel P Collins; John H Dawson; Courtni E Allen; Michael P Schmitt; Kenton R Rodgers; Dabney W Dixon
Journal:  Biochemistry       Date:  2015-10-26       Impact factor: 3.162

6.  ABC Exporters in Pathogenesis: Role of Synthetic Anti-Microbial Peptides.

Authors:  Ritika Kabra; Shailza Singh
Journal:  Protein J       Date:  2020-10-17       Impact factor: 2.371

7.  Efficient purification and reconstitution of ATP binding cassette transporter B6 (ABCB6) for functional and structural studies.

Authors:  Hemantkumar Chavan; Mohiuddin Md Taimur Khan; George Tegos; Partha Krishnamurthy
Journal:  J Biol Chem       Date:  2013-06-21       Impact factor: 5.157

8.  Conformational flexibility of the leucine binding protein examined by protein domain coarse-grained molecular dynamics.

Authors:  Iwona Siuda; Lea Thøgersen
Journal:  J Mol Model       Date:  2013-09-19       Impact factor: 1.810

9.  Analyses of conformational states of the transporter associated with antigen processing (TAP) protein in a native cellular membrane environment.

Authors:  Jie Geng; Sivaraj Sivaramakrishnan; Malini Raghavan
Journal:  J Biol Chem       Date:  2013-11-06       Impact factor: 5.157

Review 10.  Cystic fibrosis transmembrane conductance regulator (ABCC7) structure.

Authors:  John F Hunt; Chi Wang; Robert C Ford
Journal:  Cold Spring Harb Perspect Med       Date:  2013-02-01       Impact factor: 6.915

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