Literature DB >> 22752131

Variational algorithms to remove stationary noise: applications to microscopy imaging.

Jérôme Fehrenbach1, Pierre Weiss, Corinne Lorenzo.   

Abstract

A framework and an algorithm are presented in order to remove stationary noise from images. This algorithm is called variational stationary noise remover. It can be interpreted both as a restoration method in a Bayesian framework and as a cartoon+texture decomposition method. In numerous denoising applications, the white noise assumption fails. For example, structured patterns such as stripes appear in the images. The model described here addresses these cases. Applications are presented with images acquired using different modalities: scanning electron microscope, FIB-nanotomography, and an emerging fluorescence microscopy technique called selective plane illumination microscopy.

Mesh:

Year:  2012        PMID: 22752131     DOI: 10.1109/TIP.2012.2206037

Source DB:  PubMed          Journal:  IEEE Trans Image Process        ISSN: 1057-7149            Impact factor:   10.856


  18 in total

1.  Imaging neural events in zebrafish larvae with linear structured illumination light sheet fluorescence microscopy.

Authors:  Yang Liu; Savannah Dale; Rebecca Ball; Ariel J VanLeuven; Andrew Sornborger; James D Lauderdale; Peter Kner
Journal:  Neurophotonics       Date:  2019-03-05       Impact factor: 3.593

2.  Saak Transform-Based Machine Learning for Light-Sheet Imaging of Cardiac Trabeculation.

Authors:  Yichen Ding; Varun Gudapati; Ruiyuan Lin; Yanan Fei; Rene R Sevag Packard; Sibo Song; Chih-Chiang Chang; Kyung In Baek; Zhaoqiang Wang; Mehrdad Roustaei; Dengfeng Kuang; C-C Jay Kuo; Tzung K Hsiai
Journal:  IEEE Trans Biomed Eng       Date:  2020-12-21       Impact factor: 4.538

3.  Integrating light-sheet imaging with virtual reality to recapitulate developmental cardiac mechanics.

Authors:  Yichen Ding; Arash Abiri; Parinaz Abiri; Shuoran Li; Chih-Chiang Chang; Kyung In Baek; Jeffrey J Hsu; Elias Sideris; Yilei Li; Juhyun Lee; Tatiana Segura; Thao P Nguyen; Alexander Bui; René R Sevag Packard; Peng Fei; Tzung K Hsiai
Journal:  JCI Insight       Date:  2017-11-16

4.  Stripe artifact reduction for digital scanned structured illumination light sheet microscopy.

Authors:  Yang Liu; James D Lauderdale; Peter Kner
Journal:  Opt Lett       Date:  2019-05-15       Impact factor: 3.776

5.  Elimination of stripe artifacts in light sheet fluorescence microscopy using an attention-based residual neural network.

Authors:  Zechen Wei; Xiangjun Wu; Wei Tong; Suhui Zhang; Xin Yang; Jie Tian; Hui Hui
Journal:  Biomed Opt Express       Date:  2022-02-07       Impact factor: 3.732

Review 6.  Multiscale light-sheet for rapid imaging of cardiopulmonary system.

Authors:  Yichen Ding; Jianguo Ma; Adam D Langenbacher; Kyung In Baek; Juhyun Lee; Chih-Chiang Chang; Jeffrey J Hsu; Rajan P Kulkarni; John Belperio; Wei Shi; Sara Ranjbarvaziri; Reza Ardehali; Yin Tintut; Linda L Demer; Jau-Nian Chen; Peng Fei; René R Sevag Packard; Tzung K Hsiai
Journal:  JCI Insight       Date:  2018-08-23

7.  Push-Broom-Type Very High-Resolution Satellite Sensor Data Correction Using Combined Wavelet-Fourier and Multiscale Non-Local Means Filtering.

Authors:  Wonseok Kang; Soohwan Yu; Doochun Seo; Jaeheon Jeong; Joonki Paik
Journal:  Sensors (Basel)       Date:  2015-09-10       Impact factor: 3.576

8.  Imaging of human differentiated 3D neural aggregates using light sheet fluorescence microscopy.

Authors:  Emilio J Gualda; Daniel Simão; Catarina Pinto; Paula M Alves; Catarina Brito
Journal:  Front Cell Neurosci       Date:  2014-08-06       Impact factor: 5.505

9.  Remotely Sensed High-Resolution Global Cloud Dynamics for Predicting Ecosystem and Biodiversity Distributions.

Authors:  Adam M Wilson; Walter Jetz
Journal:  PLoS Biol       Date:  2016-03-31       Impact factor: 8.029

10.  Light-sheet microscopy imaging of a whole cleared rat brain with Thy1-GFP transgene.

Authors:  Marzena Stefaniuk; Emilio J Gualda; Monika Pawlowska; Diana Legutko; Paweł Matryba; Paulina Koza; Witold Konopka; Dorota Owczarek; Marcin Wawrzyniak; Pablo Loza-Alvarez; Leszek Kaczmarek
Journal:  Sci Rep       Date:  2016-06-17       Impact factor: 4.379

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.