Literature DB >> 22751500

STAR RNA-binding protein Quaking suppresses cancer via stabilization of specific miRNA.

An-Jou Chen1, Ji-Hye Paik, Hailei Zhang, Sachet A Shukla, Richard Mortensen, Jian Hu, Haoqiang Ying, Baoli Hu, Jessica Hurt, Natalie Farny, Caroline Dong, Yonghong Xiao, Y Alan Wang, Pamela A Silver, Lynda Chin, Shobha Vasudevan, Ronald A Depinho.   

Abstract

Multidimensional cancer genome analysis and validation has defined Quaking (QKI), a member of the signal transduction and activation of RNA (STAR) family of RNA-binding proteins, as a novel glioblastoma multiforme (GBM) tumor suppressor. Here, we establish that p53 directly regulates QKI gene expression, and QKI protein associates with and leads to the stabilization of miR-20a; miR-20a, in turn, regulates TGFβR2 and the TGFβ signaling network. This pathway circuitry is substantiated by in silico epistasis analysis of its components in the human GBM TCGA (The Cancer Genome Atlas Project) collection and by their gain- and loss-of-function interactions in in vitro and in vivo complementation studies. This p53-QKI-miR-20a-TGFβ pathway expands our understanding of the p53 tumor suppression network in cancer and reveals a novel tumor suppression mechanism involving regulation of specific cancer-relevant microRNAs.

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Year:  2012        PMID: 22751500      PMCID: PMC3403014          DOI: 10.1101/gad.189001.112

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  56 in total

1.  Marked genomic differences characterize primary and secondary glioblastoma subtypes and identify two distinct molecular and clinical secondary glioblastoma entities.

Authors:  Elizabeth A Maher; Cameron Brennan; Patrick Y Wen; Laura Durso; Keith L Ligon; Aaron Richardson; Deepak Khatry; Bin Feng; Raktim Sinha; David N Louis; John Quackenbush; Peter McL Black; Lynda Chin; Ronald A DePinho
Journal:  Cancer Res       Date:  2006-11-17       Impact factor: 12.701

2.  A faster circular binary segmentation algorithm for the analysis of array CGH data.

Authors:  E S Venkatraman; Adam B Olshen
Journal:  Bioinformatics       Date:  2007-01-18       Impact factor: 6.937

3.  RIP-Chip: the isolation and identification of mRNAs, microRNAs and protein components of ribonucleoprotein complexes from cell extracts.

Authors:  Jack D Keene; Jordan M Komisarow; Matthew B Friedersdorf
Journal:  Nat Protoc       Date:  2006       Impact factor: 13.491

Review 4.  microRNAs join the p53 network--another piece in the tumour-suppression puzzle.

Authors:  Lin He; Xingyue He; Scott W Lowe; Gregory J Hannon
Journal:  Nat Rev Cancer       Date:  2007-11       Impact factor: 60.716

5.  Augmentation of tumor angiogenesis by a Myc-activated microRNA cluster.

Authors:  Michael Dews; Asal Homayouni; Duonan Yu; Danielle Murphy; Cinzia Sevignani; Erik Wentzel; Emma E Furth; William M Lee; Greg H Enders; Joshua T Mendell; Andrei Thomas-Tikhonenko
Journal:  Nat Genet       Date:  2006-07-30       Impact factor: 38.330

6.  Human QKI, a potential regulator of mRNA expression of human oligodendrocyte-related genes involved in schizophrenia.

Authors:  Karolina Aberg; Peter Saetre; Niclas Jareborg; Elena Jazin
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-25       Impact factor: 11.205

7.  The RNA-binding protein Sam68 contributes to proliferation and survival of human prostate cancer cells.

Authors:  R Busà; M P Paronetto; D Farini; E Pierantozzi; F Botti; D F Angelini; F Attisani; G Vespasiani; C Sette
Journal:  Oncogene       Date:  2007-01-22       Impact factor: 9.867

8.  A microRNA component of the p53 tumour suppressor network.

Authors:  Lin He; Xingyue He; Lee P Lim; Elisa de Stanchina; Zhenyu Xuan; Yu Liang; Wen Xue; Lars Zender; Jill Magnus; Dana Ridzon; Aimee L Jackson; Peter S Linsley; Caifu Chen; Scott W Lowe; Michele A Cleary; Gregory J Hannon
Journal:  Nature       Date:  2007-06-06       Impact factor: 49.962

9.  Sam68 haploinsufficiency delays onset of mammary tumorigenesis and metastasis.

Authors:  S Richard; G Vogel; M-E Huot; T Guo; W J Muller; K E Lukong
Journal:  Oncogene       Date:  2007-07-09       Impact factor: 9.867

10.  Chromosomally unstable mouse tumours have genomic alterations similar to diverse human cancers.

Authors:  Richard S Maser; Bhudipa Choudhury; Peter J Campbell; Bin Feng; Kwok-Kin Wong; Alexei Protopopov; Jennifer O'Neil; Alejandro Gutierrez; Elena Ivanova; Ilana Perna; Eric Lin; Vidya Mani; Shan Jiang; Kate McNamara; Sara Zaghlul; Sarah Edkins; Claire Stevens; Cameron Brennan; Eric S Martin; Ruprecht Wiedemeyer; Omar Kabbarah; Cristina Nogueira; Gavin Histen; Jon Aster; Marc Mansour; Veronique Duke; Letizia Foroni; Adele K Fielding; Anthony H Goldstone; Jacob M Rowe; Yaoqi A Wang; A Thomas Look; Michael R Stratton; Lynda Chin; P Andrew Futreal; Ronald A DePinho
Journal:  Nature       Date:  2007-05-21       Impact factor: 49.962

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  61 in total

1.  The somatic genomic landscape of glioblastoma.

Authors:  Cameron W Brennan; Roel G W Verhaak; Aaron McKenna; Benito Campos; Houtan Noushmehr; Sofie R Salama; Siyuan Zheng; Debyani Chakravarty; J Zachary Sanborn; Samuel H Berman; Rameen Beroukhim; Brady Bernard; Chang-Jiun Wu; Giannicola Genovese; Ilya Shmulevich; Jill Barnholtz-Sloan; Lihua Zou; Rahulsimham Vegesna; Sachet A Shukla; Giovanni Ciriello; W K Yung; Wei Zhang; Carrie Sougnez; Tom Mikkelsen; Kenneth Aldape; Darell D Bigner; Erwin G Van Meir; Michael Prados; Andrew Sloan; Keith L Black; Jennifer Eschbacher; Gaetano Finocchiaro; William Friedman; David W Andrews; Abhijit Guha; Mary Iacocca; Brian P O'Neill; Greg Foltz; Jerome Myers; Daniel J Weisenberger; Robert Penny; Raju Kucherlapati; Charles M Perou; D Neil Hayes; Richard Gibbs; Marco Marra; Gordon B Mills; Eric Lander; Paul Spellman; Richard Wilson; Chris Sander; John Weinstein; Matthew Meyerson; Stacey Gabriel; Peter W Laird; David Haussler; Gad Getz; Lynda Chin
Journal:  Cell       Date:  2013-10-10       Impact factor: 41.582

2.  The RNA-binding protein QKI5 regulates primary miR-124-1 processing via a distal RNA motif during erythropoiesis.

Authors:  Fang Wang; Wei Song; Hongmei Zhao; Yanni Ma; Yuxia Li; Di Zhai; Jingnan Pi; Yanmin Si; Jiayue Xu; Lei Dong; Rui Su; Mengmeng Zhang; Yong Zhu; Xiaoxia Ren; Fei Miao; Wenjie Liu; Feng Li; Junwu Zhang; Aibin He; Ge Shan; Jingyi Hui; Linfang Wang; Jia Yu
Journal:  Cell Res       Date:  2017-02-28       Impact factor: 25.617

Review 3.  MicroRNA biogenesis: regulating the regulators.

Authors:  Emily F Finnegan; Amy E Pasquinelli
Journal:  Crit Rev Biochem Mol Biol       Date:  2012-11-19       Impact factor: 8.250

Review 4.  Posttranscriptional regulation of FOXO expression: microRNAs and beyond.

Authors:  P Urbánek; L-O Klotz
Journal:  Br J Pharmacol       Date:  2016-05-02       Impact factor: 8.739

5.  QKI deficiency maintains glioma stem cell stemness by activating the SHH/GLI1 signaling pathway.

Authors:  Bo Han; Ruijia Wang; Yongjie Chen; Xiangqi Meng; Pengfei Wu; Ziwei Li; Chunbin Duan; Qingbin Li; Yang Li; Shihong Zhao; Chuanlu Jiang; Jinquan Cai
Journal:  Cell Oncol (Dordr)       Date:  2019-07-10       Impact factor: 6.730

Review 6.  Outside the coding genome, mammalian microRNAs confer structural and functional complexity.

Authors:  Virginie Olive; Alex C Minella; Lin He
Journal:  Sci Signal       Date:  2015-03-17       Impact factor: 8.192

7.  An integrative bioinformatics analysis identified miR-375 as a candidate key regulator of malignant breast cancer.

Authors:  Jiaxuan Liu; Ping Wang; Ping Zhang; Xinyu Zhang; Hang Du; Qiang Liu; Bo Huang; Caiyun Qian; Shuhua Zhang; Weifeng Zhu; Xiaohong Yang; Yingqun Xiao; Zhuoqi Liu; Daya Luo
Journal:  J Appl Genet       Date:  2019-08-01       Impact factor: 3.240

8.  Targeting of TGFβ signature and its essential component CTGF by miR-18 correlates with improved survival in glioblastoma.

Authors:  Jamie L Fox; Michael Dews; Andy J Minn; Andrei Thomas-Tikhonenko
Journal:  RNA       Date:  2012-12-18       Impact factor: 4.942

9.  Quaking and PTB control overlapping splicing regulatory networks during muscle cell differentiation.

Authors:  Megan P Hall; Roland J Nagel; W Samuel Fagg; Lily Shiue; Melissa S Cline; Rhonda J Perriman; John Paul Donohue; Manuel Ares
Journal:  RNA       Date:  2013-03-22       Impact factor: 4.942

10.  The QKI-5 and QKI-6 RNA binding proteins regulate the expression of microRNA 7 in glial cells.

Authors:  Yunling Wang; Gillian Vogel; Zhenbao Yu; Stéphane Richard
Journal:  Mol Cell Biol       Date:  2013-01-14       Impact factor: 4.272

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