Literature DB >> 22749147

Overview for the histone codes for DNA repair.

Elizabeth A Williamson1, Justin W Wray, Pranshu Bansal, Robert Hromas.   

Abstract

DNA damage occurs continuously as a result of various factors-intracellular metabolism, replication, and exposure to genotoxic agents, such as ionizing radiation and chemotherapy. If left unrepaired, this damage could result in changes or mutations within the cell genomic material. There are a number of different pathways that the cell can utilize to repair these DNA breaks. However, it is of utmost interest to know how the DNA damage is signaled to the various DNA pathways. As DNA damage occurs within the chromatin, we postulate that modifications of histones are important for signaling the position of DNA damage, recruiting the DNA repair proteins to the site of damage, and creating an open structure such that the repair proteins can access the site of damage. We discuss the modifications that occur on the histones and the manner in which they relate to the type of damage that has occurred as well as the DNA repair pathways that are activated.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22749147      PMCID: PMC4039077          DOI: 10.1016/B978-0-12-387665-2.00008-0

Source DB:  PubMed          Journal:  Prog Mol Biol Transl Sci        ISSN: 1877-1173            Impact factor:   3.622


  94 in total

Review 1.  Ubiquitin-binding domains and their role in the DNA damage response.

Authors:  Kay Hofmann
Journal:  DNA Repair (Amst)       Date:  2009-02-12

Review 2.  Targeting homologous recombination repair defects in cancer.

Authors:  Bastiaan Evers; Thomas Helleday; Jos Jonkers
Journal:  Trends Pharmacol Sci       Date:  2010-07-02       Impact factor: 14.819

3.  Phosphorylation of histone H2A.X by DNA-dependent protein kinase is not affected by core histone acetylation, but it alters nucleosome stability and histone H1 binding.

Authors:  Andra Li; Yaping Yu; Sheng-Chun Lee; Toyotaka Ishibashi; Susan P Lees-Miller; Juan Ausió
Journal:  J Biol Chem       Date:  2010-03-31       Impact factor: 5.157

Review 4.  Focus on histone variant H2AX: to be or not to be.

Authors:  Jingsong Yuan; Rachel Adamski; Junjie Chen
Journal:  FEBS Lett       Date:  2010-05-21       Impact factor: 4.124

Review 5.  Tip60: connecting chromatin to DNA damage signaling.

Authors:  Yingli Sun; Xiaofeng Jiang; Brendan D Price
Journal:  Cell Cycle       Date:  2010-03-11       Impact factor: 4.534

6.  Nuclear reorganization of DNA mismatch repair proteins in response to DNA damage.

Authors:  Adam S Mastrocola; Christopher D Heinen
Journal:  DNA Repair (Amst)       Date:  2009-12-08

7.  Recombinational repair within heterochromatin requires ATP-dependent chromatin remodeling.

Authors:  Manisha Sinha; Shinya Watanabe; Aaron Johnson; Danesh Moazed; Craig L Peterson
Journal:  Cell       Date:  2009-09-18       Impact factor: 41.582

Review 8.  Chromatin remodelling beyond transcription: the INO80 and SWR1 complexes.

Authors:  Ashby J Morrison; Xuetong Shen
Journal:  Nat Rev Mol Cell Biol       Date:  2009-05-08       Impact factor: 94.444

9.  BBAP monoubiquitylates histone H4 at lysine 91 and selectively modulates the DNA damage response.

Authors:  Qingsheng Yan; Shilpee Dutt; Rong Xu; Katherine Graves; Przemyslaw Juszczynski; John P Manis; Margaret A Shipp
Journal:  Mol Cell       Date:  2009-10-09       Impact factor: 17.970

10.  Nucleosome remodeling by hMSH2-hMSH6.

Authors:  Sarah Javaid; Mridula Manohar; Nidhi Punja; Alex Mooney; Jennifer J Ottesen; Michael G Poirier; Richard Fishel
Journal:  Mol Cell       Date:  2009-12-25       Impact factor: 17.970

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  19 in total

1.  The histone chaperone ASF1 regulates the activation of ATM and DNA-PKcs in response to DNA double-strand breaks.

Authors:  Ting-Hsiang Huang; Zih-Jie Shen; Barry P Sleckman; Jessica K Tyler
Journal:  Cell Cycle       Date:  2018-07-25       Impact factor: 4.534

Review 2.  Major Determinants of Nucleosome Positioning.

Authors:  Răzvan V Chereji; David J Clark
Journal:  Biophys J       Date:  2018-04-06       Impact factor: 4.033

Review 3.  An insight into understanding the coupling between homologous recombination mediated DNA repair and chromatin remodeling mechanisms in plant genome: an update.

Authors:  Samrat Banerjee; Sujit Roy
Journal:  Cell Cycle       Date:  2021-08-26       Impact factor: 5.173

4.  Trapped Ion Mobility Spectrometry, Ultraviolet Photodissociation, and Time-of-Flight Mass Spectrometry for Gas-Phase Peptide Isobars/Isomers/Conformers Discrimination.

Authors:  Samuel A Miller; Kevin Jeanne Dit Fouque; Mark E Ridgeway; Melvin A Park; Francisco Fernandez-Lima
Journal:  J Am Soc Mass Spectrom       Date:  2022-06-05       Impact factor: 3.262

Review 5.  Histone modifications and DNA double-strand break repair after exposure to ionizing radiations.

Authors:  Clayton R Hunt; Deepti Ramnarain; Nobuo Horikoshi; Puneeth Iyengar; Raj K Pandita; Jerry W Shay; Tej K Pandita
Journal:  Radiat Res       Date:  2013-02-01       Impact factor: 2.841

6.  The Histone Chaperones ASF1 and CAF-1 Promote MMS22L-TONSL-Mediated Rad51 Loading onto ssDNA during Homologous Recombination in Human Cells.

Authors:  Ting-Hsiang Huang; Faith Fowler; Chin-Chuan Chen; Zih-Jie Shen; Barry Sleckman; Jessica K Tyler
Journal:  Mol Cell       Date:  2018-02-22       Impact factor: 17.970

7.  Critical DNA damaging pathways in tumorigenesis.

Authors:  Jake A Kloeber; Zhenkun Lou
Journal:  Semin Cancer Biol       Date:  2021-04-24       Impact factor: 15.707

8.  Long non-coding RNA exploration for mesenchymal stem cell characterisation.

Authors:  Sébastien Riquier; Marc Mathieu; Chloé Bessiere; Anthony Boureux; Florence Ruffle; Jean-Marc Lemaitre; Farida Djouad; Nicolas Gilbert; Thérèse Commes
Journal:  BMC Genomics       Date:  2021-06-04       Impact factor: 3.969

9.  Chromatin modifications and the DNA damage response to ionizing radiation.

Authors:  Rakesh Kumar; Nobuo Horikoshi; Mayank Singh; Arun Gupta; Hari S Misra; Kevin Albuquerque; Clayton R Hunt; Tej K Pandita
Journal:  Front Oncol       Date:  2013-01-22       Impact factor: 6.244

10.  TIE2-mediated tyrosine phosphorylation of H4 regulates DNA damage response by recruiting ABL1.

Authors:  Mohammad B Hossain; Rehnuma Shifat; David G Johnson; Mark T Bedford; Konrad R Gabrusiewicz; Nahir Cortes-Santiago; Xuemei Luo; Zhimin Lu; Ravesanker Ezhilarasan; Erik P Sulman; Hong Jiang; Shawn S C Li; Frederick F Lang; Jessica Tyler; Mien-Chie Hung; Juan Fueyo; Candelaria Gomez-Manzano
Journal:  Sci Adv       Date:  2016-04-01       Impact factor: 14.136

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