Literature DB >> 22740664

Genome sequence of Pseudoalteromonas flavipulchra JG1, a marine antagonistic bacterium with abundant antimicrobial metabolites.

Min Yu1, Kaihao Tang, Xiaochong Shi, Xiao-Hua Zhang.   

Abstract

The marine bacterium Pseudoalteromonas flavipulchra JG1 can synthesize various antibacterial metabolites, including protein and small molecules. The draft genome of JG1 is about 5.36 Mb and harbors approximate 4,913 genes, which will provide further insight into the synthesis of antimicrobial agents and antagonistic mechanisms of P. flavipulchra against pathogens.

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Year:  2012        PMID： 22740664      PMCID： PMC3393484          DOI： 10.1128/JB.00598-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  11 in total

1.  Marine Pseudoalteromonas species are associated with higher organisms and produce biologically active extracellular agents.

Authors: 
Journal:  FEMS Microbiol Ecol       Date:  1999-12-01       Impact factor: 4.194

2.  Improved microbial gene identification with GLIMMER.

Authors:  A L Delcher; D Harmon; S Kasif; O White; S L Salzberg
Journal:  Nucleic Acids Res       Date:  1999-12-01       Impact factor: 16.971

3.  Purification and characterization of antibacterial compounds of Pseudoalteromonas flavipulchra JG1.

Authors:  Min Yu; Junfeng Wang; Kaihao Tang; Xiaochong Shi; Shushan Wang; Wei-Ming Zhu; Xiao-Hua Zhang
Journal:  Microbiology       Date:  2011-12-22       Impact factor: 2.777

4.  Comparative genomics reveals a deep-sea sediment-adapted life style of Pseudoalteromonas sp. SM9913.

Authors:  Qi-Long Qin; Yang Li; Yan-Jiao Zhang; Zhe-Min Zhou; Wei-Xin Zhang; Xiu-Lan Chen; Xi-Ying Zhang; Bai-Cheng Zhou; Lei Wang; Yu-Zhong Zhang
Journal:  ISME J       Date:  2010-08-12       Impact factor: 10.302

5.  Coping with cold: the genome of the versatile marine Antarctica bacterium Pseudoalteromonas haloplanktis TAC125.

Authors:  Claudine Médigue; Evelyne Krin; Géraldine Pascal; Valérie Barbe; Andreas Bernsel; Philippe N Bertin; Frankie Cheung; Stéphane Cruveiller; Salvino D'Amico; Angela Duilio; Gang Fang; Georges Feller; Christine Ho; Sophie Mangenot; Gennaro Marino; Johan Nilsson; Ermenegilda Parrilli; Eduardo P C Rocha; Zoé Rouy; Agnieszka Sekowska; Maria Luisa Tutino; David Vallenet; Gunnar von Heijne; Antoine Danchin
Journal:  Genome Res       Date:  2005-09-16       Impact factor: 9.043

6.  Purification and characterization of a novel antibacterial protein from the marine bacterium D2.

Authors:  S G James; C Holmström; S Kjelleberg
Journal:  Appl Environ Microbiol       Date:  1996-08       Impact factor: 4.792

7.  MC21-A, a bactericidal antibiotic produced by a new marine bacterium, Pseudoalteromonas phenolica sp. nov. O-BC30(T), against methicillin-resistant Staphylococcus aureus.

Authors:  Alim Isnansetyo; Yuto Kamei
Journal:  Antimicrob Agents Chemother       Date:  2003-02       Impact factor: 5.191

8.  The macromolecule with antimicrobial activity synthesized by Pseudoalteromonas luteoviolacea strains is an L-amino acid oxidase.

Authors:  Daniel Gómez; Elena Espinosa; Marcelo Bertazzo; Patricia Lucas-Elío; Francisco Solano; Antonio Sanchez-Amat
Journal:  Appl Microbiol Biotechnol       Date:  2008-05-27       Impact factor: 4.813

9.  Bioactive compound synthetic capacity and ecological significance of marine bacterial genus pseudoalteromonas.

Authors:  John P Bowman
Journal:  Mar Drugs       Date:  2007-12-18       Impact factor: 5.118

10.  Analysis of the Pseudoalteromonas tunicata genome reveals properties of a surface-associated life style in the marine environment.

Authors:  Torsten Thomas; Flavia F Evans; David Schleheck; Anne Mai-Prochnow; Catherine Burke; Anahit Penesyan; Doralyn S Dalisay; Sacha Stelzer-Braid; Neil Saunders; Justin Johnson; Steve Ferriera; Staffan Kjelleberg; Suhelen Egan
Journal:  PLoS One       Date:  2008-09-24       Impact factor: 3.240
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  4 in total

1.  New Report: Genome Mining Untaps the Antibiotics Biosynthetic Gene Cluster of Pseudoalteromonas xiamenensis STKMTI.2 from a Mangrove Soil Sediment.

Authors:  Desy Putri Handayani; Alim Isnansetyo; Indah Istiqomah; Jumina Jumina
Journal:  Mar Biotechnol (NY)       Date:  2022-02-15       Impact factor: 3.619

2.  Development of an efficient conjugation-based genetic manipulation system for Pseudoalteromonas.

Authors:  Pengxia Wang; Zichao Yu; Baiyuan Li; Xingsheng Cai; Zhenshun Zeng; Xiulan Chen; Xiaoxue Wang
Journal:  Microb Cell Fact       Date:  2015-01-23       Impact factor: 5.328

Review 3.  Spotlight on Antimicrobial Metabolites from the Marine Bacteria Pseudoalteromonas: Chemodiversity and Ecological Significance.

Authors:  Clément Offret; Florie Desriac; Patrick Le Chevalier; Jérôme Mounier; Camille Jégou; Yannick Fleury
Journal:  Mar Drugs       Date:  2016-07-08       Impact factor: 5.118

4.  Genome analysis of Pseudoalteromonas flavipulchra JG1 reveals various survival advantages in marine environment.

Authors:  Min Yu; Kaihao Tang; Jiwen Liu; Xiaochong Shi; Tobias A M Gulder; Xiao-Hua Zhang
Journal:  BMC Genomics       Date:  2013-10-16       Impact factor: 3.969
  4 in total

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