Literature DB >> 22736876

Likelihood-based selection and sharp parameter estimation.

Xiaotong Shen1, Wei Pan, Yunzhang Zhu.   

Abstract

In high-dimensional data analysis, feature selection becomes one means for dimension reduction, which proceeds with parameter estimation. Concerning accuracy of selection and estimation, we study nonconvex constrained and regularized likelihoods in the presence of nuisance parameters. Theoretically, we show that constrained L(0)-likelihood and its computational surrogate are optimal in that they achieve feature selection consistency and sharp parameter estimation, under one necessary condition required for any method to be selection consistent and to achieve sharp parameter estimation. It permits up to exponentially many candidate features. Computationally, we develop difference convex methods to implement the computational surrogate through prime and dual subproblems. These results establish a central role of L(0)-constrained and regularized likelihoods in feature selection and parameter estimation involving selection. As applications of the general method and theory, we perform feature selection in linear regression and logistic regression, and estimate a precision matrix in Gaussian graphical models. In these situations, we gain a new theoretical insight and obtain favorable numerical results. Finally, we discuss an application to predict the metastasis status of breast cancer patients with their gene expression profiles.

Entities:  

Year:  2012        PMID: 22736876      PMCID: PMC3378256          DOI: 10.1080/01621459.2011.645783

Source DB:  PubMed          Journal:  J Am Stat Assoc        ISSN: 0162-1459            Impact factor:   5.033


  7 in total

1.  Gradient directed regularization for sparse Gaussian concentration graphs, with applications to inference of genetic networks.

Authors:  Hongzhe Li; Jiang Gui
Journal:  Biostatistics       Date:  2005-12-02       Impact factor: 5.899

2.  Nonparametric pathway-based regression models for analysis of genomic data.

Authors:  Zhi Wei; Hongzhe Li
Journal:  Biostatistics       Date:  2006-06-13       Impact factor: 5.899

3.  Sparse inverse covariance estimation with the graphical lasso.

Authors:  Jerome Friedman; Trevor Hastie; Robert Tibshirani
Journal:  Biostatistics       Date:  2007-12-12       Impact factor: 5.899

4.  Gene-expression profiles to predict distant metastasis of lymph-node-negative primary breast cancer.

Authors:  Yixin Wang; Jan G M Klijn; Yi Zhang; Anieta M Sieuwerts; Maxime P Look; Fei Yang; Dmitri Talantov; Mieke Timmermans; Marion E Meijer-van Gelder; Jack Yu; Tim Jatkoe; Els M J J Berns; David Atkins; John A Foekens
Journal:  Lancet       Date:  2005 Feb 19-25       Impact factor: 79.321

5.  NETWORK EXPLORATION VIA THE ADAPTIVE LASSO AND SCAD PENALTIES.

Authors:  Jianqing Fan; Yang Feng; Yichao Wu
Journal:  Ann Appl Stat       Date:  2009-06-01       Impact factor: 2.083

6.  One-step Sparse Estimates in Nonconcave Penalized Likelihood Models.

Authors:  Hui Zou; Runze Li
Journal:  Ann Stat       Date:  2008-08-01       Impact factor: 4.028

7.  CancerGenes: a gene selection resource for cancer genome projects.

Authors:  Maureen E Higgins; Martine Claremont; John E Major; Chris Sander; Alex E Lash
Journal:  Nucleic Acids Res       Date:  2006-11-06       Impact factor: 16.971

  7 in total
  45 in total

1.  Multiple Matrix Gaussian Graphs Estimation.

Authors:  Yunzhang Zhu; Lexin Li
Journal:  J R Stat Soc Series B Stat Methodol       Date:  2018-06-14       Impact factor: 4.488

2.  Simultaneous supervised clustering and feature selection over a graph.

Authors:  Xiaotong Shen; Hsin-Cheng Huang; Wei Pan
Journal:  Biometrika       Date:  2012-10-18       Impact factor: 2.445

3.  Efficient ℓ0 -norm feature selection based on augmented and penalized minimization.

Authors:  Xiang Li; Shanghong Xie; Donglin Zeng; Yuanjia Wang
Journal:  Stat Med       Date:  2017-10-30       Impact factor: 2.373

4.  Structural pursuit over multiple undirected graphs.

Authors:  Yunzhang Zhu; Xiaotong Shen; Wei Pan
Journal:  J Am Stat Assoc       Date:  2014-10       Impact factor: 5.033

5.  Group variable selection via convex log-exp-sum penalty with application to a breast cancer survivor study.

Authors:  Zhigeng Geng; Sijian Wang; Menggang Yu; Patrick O Monahan; Victoria Champion; Grace Wahba
Journal:  Biometrics       Date:  2014-09-24       Impact factor: 2.571

6.  On constrained and regularized high-dimensional regression.

Authors:  Xiaotong Shen; Wei Pan; Yunzhang Zhu; Hui Zhou
Journal:  Ann Inst Stat Math       Date:  2013-10       Impact factor: 1.267

7.  Graph Estimation From Multi-Attribute Data.

Authors:  Mladen Kolar; Han Liu; Eric P Xing
Journal:  J Mach Learn Res       Date:  2014-05       Impact factor: 3.654

8.  Maximum Likelihood Estimation Over Directed Acyclic Gaussian Graphs.

Authors:  Yiping Yuan; Xiaotong Shen; Wei Pan
Journal:  Stat Anal Data Min       Date:  2012-12-01       Impact factor: 1.051

9.  Hierarchical Feature Selection Incorporating Known and Novel Biological Information: Identifying Genomic Features Related to Prostate Cancer Recurrence.

Authors:  Yize Zhao; Matthias Chung; Brent A Johnson; Carlos S Moreno; Qi Long
Journal:  J Am Stat Assoc       Date:  2017-01-04       Impact factor: 5.033

10.  Simultaneous grouping pursuit and feature selection over an undirected graph.

Authors:  Yunzhang Zhu; Xiaotong Shen; Wei Pan
Journal:  J Am Stat Assoc       Date:  2013-01-01       Impact factor: 5.033

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.